Conservation of cofitness between GFF1491 and GFF3746 in Sphingobium sp. HT1-2

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF1491 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 1.0 GFF3746 Ornithine carbamoyltransferase (EC 2.1.3.3) 0.63 18
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF2719 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.43 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Shewanella loihica PV-4 0.59 Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.35 Shew_0204 ornithine carbamoyltransferase (RefSeq) low > 60
Variovorax sp. OAS795 0.59 ABID97_RS00265 NAD(P)-dependent oxidoreductase 0.44 ABID97_RS08630 ornithine carbamoyltransferase — —
Shewanella amazonensis SB2B 0.58 Sama_1975 2-hydroxy-3-oxopropionate reductase (RefSeq) 0.36 Sama_0258 ornithine carbamoyltransferase (RefSeq) low > 62
Sinorhizobium meliloti 1021 0.58 SMc00133 oxidoreductase 0.54 SMc02137 ornithine carbamoyltransferase low > 103
Variovorax sp. SCN45 0.58 GFF3739 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.43 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Shewanella sp. ANA-3 0.58 Shewana3_2554 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.37 Shewana3_3903 ornithine carbamoyltransferase (RefSeq) low > 73
Bosea sp. OAE506 0.58 ABIE41_RS21160 NAD(P)-dependent oxidoreductase 0.46 ABIE41_RS04335 ornithine carbamoyltransferase — —
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4470 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.45 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Shewanella oneidensis MR-1 0.57 SO2771 garR 2-hydroxy-3-oxopropionate reductase (NCBI ptt file) 0.37 SO0277 argF ornithine carbamoyltransferase (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.57 OH686_02015 2-hydroxy-3-oxopropionate reductase 0.43 OH686_20405 ornithine carbamoyltransferase low > 80
Pseudomonas segetis P6 0.57 ACVTMO_RS11630 NAD(P)-dependent oxidoreductase 0.43 ACVTMO_RS07120 argF ornithine carbamoyltransferase — —
Rhodopseudomonas palustris CGA009 0.56 TX73_010170 NAD(P)-dependent oxidoreductase 0.51 TX73_024805 ornithine carbamoyltransferase — —
Rhizobium sp. OAE497 0.56 ABIE40_RS10680 NAD(P)-dependent oxidoreductase 0.54 ABIE40_RS02325 ornithine carbamoyltransferase 0.39 15
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS31100 oxidoreductase 0.42 RR42_RS17175 ornithine carbamoyltransferase — —
Pseudomonas aeruginosa PA14 0.55 IKLFDK_07540 oxidoreductase 0.45 IKLFDK_18055 ornithine carbamoyltransferase low > 98
Pseudomonas aeruginosa MRSN321 0.54 DY961_RS19525 NAD(P)-dependent oxidoreductase 0.45 DY961_RS15330 argF;go_function=ornithine ornithine carbamoyltransferase low > 100
Caulobacter crescentus NA1000 0.54 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.55 CCNA_02325 ornithine carbamoyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.55 CCNA_02325 ornithine carbamoyltransferase low > 67
Marinobacter adhaerens HP15 0.54 HP15_1515 6-phosphogluconate dehydrogenase domain protein 0.41 HP15_750 ornithine carbamoyltransferase — —
Pseudomonas aeruginosa PUPa3 0.54 DQ20_RS53640 NAD(P)-dependent oxidoreductase 0.45 DQ20_RS41820 argF;go_function=ornithine ornithine carbamoyltransferase low > 101
Alteromonas macleodii MIT1002 0.52 MIT1002_01976 2-hydroxy-3-oxopropionate reductase 0.31 MIT1002_00469 Ornithine carbamoyltransferase low > 70
Dinoroseobacter shibae DFL-12 0.52 Dshi_3047 6-phosphogluconate dehydrogenase NAD-binding (RefSeq) 0.54 Dshi_0796 ornithine carbamoyltransferase (RefSeq) low > 64
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS06070 NAD(P)-dependent oxidoreductase 0.55 A4249_RS11920 ornithine carbamoyltransferase low > 48
Phaeobacter inhibens DSM 17395 0.51 PGA1_c14880 putative 3-hydroxyisobutyrate dehydrogenase 0.53 PGA1_c24220 ornithine carbamoyltransferase ArgF low > 62
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_14090 NAD(P)-dependent oxidoreductase 0.32 CSW01_12720 ornithine carbamoyltransferase low > 62
Dechlorosoma suillum PS 0.30 Dsui_3436 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase 0.43 Dsui_3249 ornithine carbamoyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS15600 NAD(P)-dependent oxidoreductase 0.21 ABZR86_RS08730 N-acetylornithine carbamoyltransferase low > 74
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS00230 NAD(P)-dependent oxidoreductase 0.43 ABZR87_RS00840 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS04620 NAD(P)-dependent oxidoreductase 0.42 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Xanthobacter sp. DMC5 0.29 GFF1957 2-hydroxy-3-oxopropionate reductase 0.51 GFF1807 Ornithine carbamoyltransferase, anabolic — —
Ralstonia solanacearum UW163 0.29 UW163_RS09050 NAD(P)-dependent oxidoreductase 0.42 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS12755 NAD(P)-dependent oxidoreductase 0.43 RPSI07_RS12115 ornithine carbamoyltransferase — —
Lysobacter sp. OAE881 0.29 ABIE51_RS00115 NAD(P)-dependent oxidoreductase 0.21 ABIE51_RS13410 N-acetylornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.29 RS_RS12190 NAD(P)-dependent oxidoreductase 0.43 RS_RS12805 ornithine carbamoyltransferase — —
Synechocystis sp000284455 PCC 6803 0.29 SGL_RS13640 NAD(P)-dependent oxidoreductase 0.40 SGL_RS16800 ornithine carbamoyltransferase — —
Pseudomonas orientalis W4I3 0.28 QF045_RS11500 2-hydroxy-3-oxopropionate reductase 0.44 QF045_RS08520 ornithine carbamoyltransferase low > 93
Pseudomonas simiae WCS417 0.28 PS417_08800 tartronate semialdehyde reductase 0.45 PS417_05595 ornithine carbamoyltransferase — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS07955 tartronate semialdehyde reductase 0.47 AZOBR_RS19030 ornithine carbamoyltransferase — —
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_01891 2-hydroxy-3-oxopropionate reductase 0.44 GEMAOFIL_01306 Ornithine carbamoyltransferase 1, anabolic low > 96
Klebsiella pneumoniae MKP103 0.28 KDGMDA_05690 2-hydroxy-3-oxopropionate reductase 0.33 KDGMDA_11500 ornithine carbamoyltransferase low > 95
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS08860 2-hydroxy-3-oxopropionate reductase 0.45 PFLU_RS05680 ornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.28 ABCV34_RS12130 2-hydroxy-3-oxopropionate reductase 0.41 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Pseudomonas fluorescens SBW25 0.28 PFLU_RS08860 2-hydroxy-3-oxopropionate reductase 0.45 PFLU_RS05680 ornithine carbamoyltransferase — —
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS16870 2-hydroxy-3-oxopropionate reductase 0.31 PagCFBP13505_RS08950 ornithine carbamoyltransferase low > 74
Escherichia coli ECOR38 0.28 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase 0.34 HEPCGN_10025 argF ornithine carbamoyltransferase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.34 GFF934 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 78
Escherichia coli ECRC99 0.28 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase 0.34 KEDOAH_16320 argF ornithine carbamoyltransferase — —
Escherichia coli BL21 0.28 ECD_02990 tartronate semialdehyde reductase 0.34 ECD_04120 ornithine carbamoyltransferase 1 low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.28 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase 0.34 OHPLBJKB_03782 Ornithine carbamoyltransferase subunit I low > 74
Escherichia coli ECRC62 0.28 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase 0.34 BNILDI_07425 argF ornithine carbamoyltransferase low > 75
Escherichia coli ECRC100 0.28 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase 0.34 OKFHMN_11835 argF ornithine carbamoyltransferase low > 79
Escherichia coli ECRC98 0.28 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase 0.34 JDDGAC_15475 argF ornithine carbamoyltransferase low > 87
Escherichia coli ECOR27 0.28 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase 0.34 NOLOHH_04090 argF ornithine carbamoyltransferase low > 76
Escherichia coli ECRC102 0.28 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase 0.34 NIAGMN_09685 argF ornithine carbamoyltransferase low > 80
Escherichia coli ECRC101 0.28 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase 0.34 MCAODC_02340 argF ornithine carbamoyltransferase low > 87
Escherichia coli Nissle 1917 0.28 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase 0.34 ECOLIN_RS24665 ornithine carbamoyltransferase low > 55
Escherichia coli BW25113 0.28 b3125 garR tartronate semialdehyde reductase (RefSeq) 0.34 b4254 argI ornithine carbamoyltransferase 1 (NCBI) low > 76
Rahnella sp. WP5 0.27 EX31_RS07980 2-hydroxy-3-oxopropionate reductase 0.34 EX31_RS12825 ornithine carbamoyltransferase low > 89
Pantoea sp. MT58 0.27 IAI47_04100 2-hydroxy-3-oxopropionate reductase 0.33 IAI47_16845 ornithine carbamoyltransferase low > 76
Pseudomonas sp. BP01 0.27 JOY50_RS00360 2-hydroxy-3-oxopropionate reductase 0.46 JOY50_RS14890 argF ornithine carbamoyltransferase low > 84
Pseudomonas stutzeri RCH2 0.27 Psest_1179 2-hydroxy-3-oxopropionate reductase 0.43 Psest_1291 ornithine carbamoyltransferase — —
Pseudomonas putida KT2440 0.27 PP_4299 tartronate semialdehyde reductase 0.45 PP_1079 Ornithine carbamoyltransferase — —
Pseudomonas sp. RS175 0.27 PFR28_03112 2-hydroxy-3-oxopropionate reductase 0.44 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic — —
Dickeya dadantii 3937 0.27 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase 0.33 DDA3937_RS01940 ornithine carbamoyltransferase low > 74
Pseudomonas sp. SVBP6 0.26 COO64_RS25875 2-hydroxy-3-oxopropionate reductase 0.43 COO64_RS16825 argF ornithine carbamoyltransferase low > 93
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_5837 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.44 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS08825 tartronate semialdehyde reductase 0.42 BPHYT_RS15915 ornithine carbamoyltransferase low > 109
Paraburkholderia graminis OAS925 0.26 ABIE53_006511 2-hydroxy-3-oxopropionate reductase 0.44 ABIE53_003354 ornithine carbamoyltransferase — —
Escherichia fergusonii Becca 0.26 EFB2_00694 2-hydroxy-3-oxopropionate reductase 0.34 EFB2_04281 Ornithine carbamoyltransferase subunit I low > 86
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_19610 2-hydroxy-3-oxopropionate reductase 0.43 AO356_18275 ornithine carbamoyltransferase low > 104
Paraburkholderia bryophila 376MFSha3.1 0.26 H281DRAFT_00785 2-hydroxy-3-oxopropionate reductase 0.44 H281DRAFT_04119 ornithine carbamoyltransferase low > 103
Dickeya dianthicola ME23 0.26 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.33 DZA65_RS01985 ornithine carbamoyltransferase low > 75
Pseudomonas sp. DMC3 0.26 GFF2501 2-hydroxy-3-oxopropionate reductase 0.44 GFF5102 Ornithine carbamoyltransferase 1, anabolic low > 89
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4297 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.44 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Klebsiella michiganensis M5al 0.26 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase 0.34 BWI76_RS03010 ornithine carbamoyltransferase low > 92
Dickeya dianthicola 67-19 0.26 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.33 HGI48_RS01915 ornithine carbamoyltransferase low > 71
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS32505 2-hydroxy-3-oxopropionate reductase 0.42 QEN71_RS02785 ornithine carbamoyltransferase low > 153
Erwinia tracheiphila HP pepo 2.2 0.26 IJEDHG_17355 garR 2-hydroxy-3-oxopropionate reductase 0.33 IJEDHG_14125 argF ornithine carbamoyltransferase low > 61
Erwinia tracheiphila SCR3 0.26 LU632_RS06330 garR 2-hydroxy-3-oxopropionate reductase 0.32 LU632_RS20900 argF ornithine carbamoyltransferase low > 73
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_01930 2-hydroxy-3-oxopropionate reductase 0.45 AO353_04155 ornithine carbamoyltransferase low > 101
Enterobacter sp. TBS_079 0.25 MPMX20_04033 2-hydroxy-3-oxopropionate reductase 0.36 MPMX20_00547 Ornithine carbamoyltransferase low > 85
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase 0.36 EX28DRAFT_3450 ornithine carbamoyltransferase low > 76
Pectobacterium carotovorum WPP14 0.25 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.34 HER17_RS19500 ornithine carbamoyltransferase low > 75
Agrobacterium fabrum C58 0.25 Atu2737 oxidoredutase 0.55 Atu0429 ornithine carbamoyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_2927 garR tartronate semialdehyde reductase (RefSeq) 0.46 DvMF_0046 ornithine carbamoyltransferase (RefSeq) low > 51
Azospirillum sp. SherDot2 0.23 MPMX19_05813 2-hydroxy-3-oxopropionate reductase 0.45 MPMX19_02178 Ornithine carbamoyltransferase, anabolic — —
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3659 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.44 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) — —

Not shown: 0 genomes with orthologs for GFF1491 only; 34 genomes with orthologs for GFF3746 only