Conservation of cofitness between PS417_08155 and PS417_00180 in Pseudomonas simiae WCS417

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_08155 integration host factor subunit beta 1.0 PS417_00180 tryptophan synthase subunit alpha 0.33 7
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS08125 integration host factor subunit beta 0.99 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS08125 integration host factor subunit beta 0.99 PFLU_RS00175 tryptophan synthase subunit alpha 0.56 85
Pseudomonas fluorescens FW300-N2E3 1.00 AO353_02040 integration host factor subunit beta 0.93 AO353_10705 tryptophan synthase subunit alpha 0.28 75
Pseudomonas syringae pv. syringae B728a 0.99 Psyr_3641 Integration host factor, beta subunit 0.81 Psyr_0033 tryptophan synthase, alpha chain
Pseudomonas syringae pv. syringae B728a ΔmexB 0.99 Psyr_3641 Integration host factor, beta subunit 0.81 Psyr_0033 tryptophan synthase, alpha chain
Pseudomonas fluorescens GW456-L13 0.99 PfGW456L13_2181 Integration host factor beta subunit 0.94 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20)
Pseudomonas fluorescens FW300-N1B4 0.99 Pf1N1B4_345 Integration host factor beta subunit 0.92 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas putida KT2440 0.97 PP_1773 Integration host factor subunit beta 0.80 PP_0082 tryptophan synthase alpha chain
Pseudomonas sp. RS175 0.97 PFR28_00913 Integration host factor subunit beta 0.90 PFR28_04716 Tryptophan synthase alpha chain
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_2515 Integration host factor beta subunit 0.91 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20)
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_03435 integration host factor subunit beta 0.90 AO356_10910 tryptophan synthase subunit alpha 0.45 26
Pseudomonas sp. S08-1 0.93 OH686_20895 integration host factor, beta subunit 0.84 OH686_12430 tryptophan synthase, alpha subunit low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_1805 integration host factor, beta subunit 0.84 Psest_0062 tryptophan synthase, alpha subunit low > 67
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_2328 integration host factor, beta subunit 0.25 B158DRAFT_2430 tryptophan synthase, alpha chain (EC 4.2.1.20)
Shewanella loihica PV-4 0.73 Shew_1955 integration host factor, beta subunit (RefSeq) 0.27 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq)
Shewanella sp. ANA-3 0.73 Shewana3_1978 ihfB integration host factor subunit beta (RefSeq) 0.27 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq)
Shewanella oneidensis MR-1 0.73 SO2401 ihfB integration host factor, beta subunit (NCBI ptt file) 0.29 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file)
Shewanella amazonensis SB2B 0.72 Sama_1737 ihfB integration host factor subunit beta (RefSeq) 0.28 Sama_2134 trpA tryptophan synthase subunit alpha (RefSeq) low > 62
Dickeya dadantii 3937 0.72 DDA3937_RS09690 integration host factor subunit beta 0.27 DDA3937_RS10460 tryptophan synthase subunit alpha
Alteromonas macleodii MIT1002 0.71 MIT1002_02188 Integration host factor subunit beta 0.28 MIT1002_01425 Tryptophan synthase alpha chain
Dickeya dianthicola ME23 0.71 DZA65_RS10010 integration host factor subunit beta 0.27 DZA65_RS10940 tryptophan synthase subunit alpha
Dickeya dianthicola 67-19 0.71 HGI48_RS09700 integration host factor subunit beta 0.27 HGI48_RS10460 tryptophan synthase subunit alpha
Pectobacterium carotovorum WPP14 0.71 HER17_RS12270 integration host factor subunit beta 0.26 HER17_RS10940 tryptophan synthase subunit alpha
Rhodanobacter denitrificans FW104-10B01 0.70 LRK54_RS18040 integration host factor subunit beta 0.40 LRK54_RS01680 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
Escherichia coli ECRC99 0.70 KEDOAH_22270 ihfB integration host factor subunit beta 0.27 KEDOAH_26075 trpA tryptophan synthase subunit alpha
Escherichia coli ECRC101 0.70 MCAODC_24855 ihfB integration host factor subunit beta 0.27 MCAODC_15590 trpA tryptophan synthase subunit alpha
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_02756 Integration host factor subunit beta 0.27 OHPLBJKB_02423 Tryptophan synthase alpha chain
Escherichia coli ECOR27 0.70 NOLOHH_22025 ihfB integration host factor subunit beta 0.27 NOLOHH_20335 trpA tryptophan synthase subunit alpha
Escherichia coli ECRC101 0.70 OKFHMN_05465 ihfB integration host factor subunit beta 0.27 OKFHMN_02675 trpA tryptophan synthase subunit alpha
Escherichia coli Nissle 1917 0.70 ECOLIN_RS04830 integration host factor subunit beta 0.27 ECOLIN_RS07595 tryptophan synthase subunit alpha
Escherichia fergusonii Becca 0.70 EFB2_03152 Integration host factor subunit beta 0.27 EFB2_02666 Tryptophan synthase alpha chain
Klebsiella michiganensis M5al 0.70 BWI76_RS09785 integration host factor subunit beta 0.27 BWI76_RS11840 tryptophan synthase subunit alpha
Serratia liquefaciens MT49 0.70 IAI46_08655 integration host factor subunit beta 0.25 IAI46_14045 tryptophan synthase subunit alpha
Rhodanobacter denitrificans MT42 0.70 LRK55_RS17895 integration host factor subunit beta 0.40 LRK55_RS01460 tryptophan synthase subunit alpha
Escherichia coli ECRC98 0.70 JDDGAC_09075 ihfB integration host factor subunit beta 0.27 JDDGAC_05220 trpA tryptophan synthase subunit alpha
Escherichia coli BW25113 0.70 b0912 ihfB integration host factor subunit beta (NCBI) 0.27 b1260 trpA tryptophan synthase subunit alpha (NCBI) 0.40 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF3669 Integration host factor beta subunit 0.28 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 78
Escherichia coli ECOR38 0.70 HEPCGN_23060 ihfB integration host factor subunit beta 0.27 HEPCGN_25515 trpA tryptophan synthase subunit alpha
Escherichia coli BL21 0.70 ECD_00916 integration host factor (IHF), DNA-binding protein, beta subunit 0.27 ECD_01234 tryptophan synthase, alpha subunit
Escherichia coli ECRC62 0.70 BNILDI_20280 ihfB integration host factor subunit beta 0.27 BNILDI_18480 trpA tryptophan synthase subunit alpha
Escherichia coli ECRC102 0.70 NIAGMN_03185 ihfB integration host factor subunit beta 0.27 NIAGMN_26845 trpA tryptophan synthase subunit alpha
Rahnella sp. WP5 0.69 EX31_RS18235 integration host factor subunit beta 0.27 EX31_RS09980 tryptophan synthase subunit alpha
Enterobacter asburiae PDN3 0.69 EX28DRAFT_2024 integration host factor, beta subunit 0.26 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20)
Enterobacter sp. TBS_079 0.69 MPMX20_01570 Integration host factor subunit beta 0.27 MPMX20_02514 Tryptophan synthase alpha chain low > 85
Marinobacter adhaerens HP15 0.69 HP15_1367 integration host factor, beta subunit 0.43 HP15_1826 tryptophan synthase, alpha subunit
Rhodanobacter sp. FW510-T8 0.69 OKGIIK_07260 ihfB integration host factor subunit beta 0.40 OKGIIK_04850 trpA tryptophan synthase subunit alpha
Vibrio cholerae E7946 ATCC 55056 0.68 CSW01_09575 integration host factor subunit beta 0.28 CSW01_05925 tryptophan synthase subunit alpha
Xanthomonas campestris pv. campestris strain 8004 0.68 Xcc-8004.2382.1 Integration host factor beta subunit 0.35 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20)
Erwinia tracheiphila SCR3 0.67 LU632_RS09810 ihfB integration host factor subunit beta 0.24 LU632_RS12775 trpA tryptophan synthase subunit alpha
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS05560 integration host factor subunit beta 0.40 ABZR86_RS07995 tryptophan synthase subunit alpha
Pantoea sp. MT58 0.67 IAI47_12845 integration host factor subunit beta 0.26 IAI47_09165 tryptophan synthase subunit alpha
Lysobacter sp. OAE881 0.66 ABIE51_RS09350 integration host factor subunit beta 0.40 ABIE51_RS08265 tryptophan synthase subunit alpha
Acinetobacter radioresistens SK82 0.59 MPMX26_01237 Integration host factor subunit beta 0.43 MPMX26_02611 Tryptophan synthase alpha chain
Dechlorosoma suillum PS 0.59 Dsui_1944 integration host factor, beta subunit 0.43 Dsui_3191 tryptophan synthase, alpha subunit
Castellaniella sp019104865 MT123 0.58 ABCV34_RS07085 integration host factor subunit beta 0.37 ABCV34_RS08430 tryptophan synthase subunit alpha
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS18405 integration host factor subunit beta 0.45 HSERO_RS16470 tryptophan synthase subunit alpha
Paraburkholderia graminis OAS925 0.56 ABIE53_003151 integration host factor subunit beta 0.39 ABIE53_004811 tryptophan synthase alpha chain
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_03919 integration host factor subunit beta 0.36 H281DRAFT_06065 tryptophan synthase, alpha chain
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS14880 integration host factor subunit beta 0.37 BPHYT_RS33865 tryptophan synthase alpha chain low > 109
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS04100 integration host factor subunit beta 0.37 QEN71_RS17655 tryptophan synthase subunit alpha
Variovorax sp. SCN45 0.54 GFF6178 Integration host factor beta subunit 0.40 GFF3882 Tryptophan synthase alpha chain (EC 4.2.1.20)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5347 Integration host factor beta subunit 0.42 GFF3354 Tryptophan synthase alpha chain (EC 4.2.1.20)
Variovorax sp. OAS795 0.53 ABID97_RS09495 integration host factor subunit beta 0.39 ABID97_RS08425 tryptophan synthase subunit alpha
Magnetospirillum magneticum AMB-1 0.53 AMB_RS20265 integration host factor subunit beta 0.58 AMB_RS20300 tryptophan synthase subunit alpha
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2578 Integration host factor beta subunit 0.44 Ac3H11_1535 Tryptophan synthase alpha chain (EC 4.2.1.20)
Rhodopseudomonas palustris CGA009 0.51 TX73_000345 integration host factor subunit beta 0.60 TX73_000365 tryptophan synthase subunit alpha
Azospirillum brasilense Sp245 0.50 AZOBR_RS03110 integration host factor subunit beta 0.56 AZOBR_RS00520 tryptophan synthase subunit alpha low > 97
Rhodospirillum rubrum S1H 0.50 Rru_A0292 Integration host factor, beta subunit (NCBI) 0.50 Rru_A3428 Tryptophan synthase (NCBI)
Bosea sp. OAE506 0.50 ABIE41_RS00295 integration host factor subunit beta 0.59 ABIE41_RS03930 tryptophan synthase subunit alpha
Azospirillum sp. SherDot2 0.49 MPMX19_02383 Integration host factor subunit beta 0.57 MPMX19_02737 Tryptophan synthase alpha chain
Phaeobacter inhibens DSM 17395 0.49 PGA1_c04840 integration host factor subunit beta 0.58 PGA1_c04930 tryptophan synthase alpha chain
Dinoroseobacter shibae DFL-12 0.48 Dshi_1027 integration host factor, beta subunit (RefSeq) 0.57 Dshi_0952 tryptophan synthase, alpha subunit (RefSeq)
Agrobacterium fabrum C58 0.47 Atu0338 integration host factor, beta subunit 0.56 Atu0019 tryptophan synthase alpha subunit
Caulobacter crescentus NA1000 0.47 CCNA_03701 integration host factor beta-subunit 0.48 CCNA_03657 tryptophan synthase alpha chain low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_03701 integration host factor beta-subunit 0.48 CCNA_03657 tryptophan synthase alpha chain low > 67
Sinorhizobium meliloti 1021 0.47 SMc01134 integration host factor subunit beta 0.56 SMc02765 tryptophan synthase subunit alpha
Rhizobium sp. OAE497 0.47 ABIE40_RS01835 integration host factor subunit beta 0.56 ABIE40_RS19340 tryptophan synthase subunit alpha
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS10895 integration host factor subunit beta 0.49 A4249_RS11320 tryptophan synthase subunit alpha
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_3896 integration host factor, beta subunit 0.47 Ga0059261_0239 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 68
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_2799 histone family protein DNA-binding protein (RefSeq) 0.30 DvMF_1740 trpA tryptophan synthase subunit alpha (RefSeq) low > 51
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_14990 integration host factor subunit beta 0.27 CA264_05085 tryptophan synthase subunit alpha
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_1249 Bacterial nucleoid DNA-binding protein 0.28 Echvi_2511 tryptophan synthase, alpha subunit
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS22675 integration host factor subunit beta 0.25 CA265_RS05025 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS20435 HU family DNA-binding protein 0.27 ABZR88_RS10660 tryptophan synthase subunit alpha

Not shown: 0 genomes with orthologs for PS417_08155 only; 18 genomes with orthologs for PS417_00180 only