Conservation of cofitness between Psest_2317 and Psest_2490 in Pseudomonas stutzeri RCH2

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2317 Uncharacterized protein conserved in bacteria 1.0 Psest_2490 succinyl-CoA synthetase, alpha subunit 0.36 2
Pseudomonas sp. S08-1 0.90 OH686_01665 Phosphoenolpyruvate synthase regulatory protein 0.95 OH686_01950 Succinyl-CoA ligase [ADP-forming] alpha chain
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_2089 Protein of unknown function DUF299 0.93 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_2089 Protein of unknown function DUF299 0.93 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit
Pseudomonas sp. RS175 0.88 PFR28_01037 Phosphoenolpyruvate synthase regulatory protein 0.92 PFR28_03092 Succinate--CoA ligase [ADP-forming] subunit alpha
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_00875 transcriptional regulator 0.91 AO353_01815 succinyl-CoA synthetase subunit alpha
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_02830 transcriptional regulator 0.92 AO356_19715 succinyl-CoA synthetase subunit alpha
Pseudomonas fluorescens FW300-N2E2 0.87 Pf6N2E2_2391 FIG137360: hypothetical protein 0.92 Pf6N2E2_5859 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_3824 FIG137360: hypothetical protein 0.91 Pf1N1B4_3685 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 0.50 26
Pseudomonas putida KT2440 0.87 PP_2081 putative phosphoenolpyruvate synthase regulatory protein 0.95 PP_4185 succinyl-CoA synthetase alpha subunit
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS22635 kinase/pyrophosphorylase 0.91 PFLU_RS08975 succinate--CoA ligase subunit alpha
Pseudomonas simiae WCS417 0.87 PS417_21025 PEP synthetase regulatory protein 0.92 PS417_08915 succinyl-CoA synthetase subunit alpha
Pseudomonas fluorescens SBW25 0.87 PFLU_RS22635 kinase/pyrophosphorylase 0.91 PFLU_RS08975 succinate--CoA ligase subunit alpha
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4113 FIG137360: hypothetical protein 0.91 PfGW456L13_4265 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Marinobacter adhaerens HP15 0.69 HP15_2230 phosphotransferase YdiA 0.85 HP15_1525 succinyl-CoA synthetase, alpha subunit
Acinetobacter radioresistens SK82 0.56 MPMX26_01167 Phosphoenolpyruvate synthase regulatory protein 0.74 MPMX26_00755 Succinate--CoA ligase [ADP-forming] subunit alpha
Kangiella aquimarina DSM 16071 0.55 B158DRAFT_1552 Uncharacterized protein conserved in bacteria 0.88 B158DRAFT_1427 succinyl-CoA synthetase, alpha subunit
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS07245 pyruvate, water dikinase regulatory protein 0.72 ABZR86_RS11020 succinate--CoA ligase subunit alpha
Rahnella sp. WP5 0.51 EX31_RS13940 kinase/pyrophosphorylase 0.85 EX31_RS23455 succinate--CoA ligase subunit alpha low > 89
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS00470 kinase/pyrophosphorylase 0.52 RALBFv3_RS12030 succinate--CoA ligase subunit alpha
Ralstonia solanacearum UW163 0.51 UW163_RS13800 kinase/pyrophosphorylase 0.52 UW163_RS01605 succinate--CoA ligase subunit alpha
Dechlorosoma suillum PS 0.51 Dsui_2678 hypothetical protein 0.52 Dsui_1446 succinyl-CoA synthetase, alpha subunit low > 51
Ralstonia solanacearum GMI1000 0.51 RS_RS07125 phosphoenolpyruvate synthase regulatory protein 0.52 RS_RS02780 succinate--CoA ligase subunit alpha
Ralstonia solanacearum PSI07 0.51 RPSI07_RS17020 kinase/pyrophosphorylase 0.52 RPSI07_RS21240 succinate--CoA ligase subunit alpha
Alteromonas macleodii MIT1002 0.51 MIT1002_01815 Phosphoenolpyruvate synthase regulatory protein 0.88 MIT1002_01951 Succinyl-CoA ligase [ADP-forming] subunit alpha
Shewanella amazonensis SB2B 0.51 Sama_2073 hypothetical protein (RefSeq) 0.88 Sama_1430 succinyl-CoA synthetase alpha chain (RefSeq)
Shewanella oneidensis MR-1 0.51 SO2645 conserved hypothetical protein (NCBI ptt file) 0.86 SO1933 sucD succinyl-CoA synthase, alpha subunit (NCBI ptt file)
Shewanella sp. ANA-3 0.51 Shewana3_1735 hypothetical protein (RefSeq) 0.87 Shewana3_1713 succinyl-CoA synthetase (ADP-forming) alpha subunit (RefSeq)
Rhodanobacter denitrificans MT42 0.51 LRK55_RS16590 pyruvate, water dikinase regulatory protein 0.72 LRK55_RS04760 succinate--CoA ligase subunit alpha low > 63
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS16875 kinase/pyrophosphorylase 0.72 LRK54_RS04980 succinate--CoA ligase subunit alpha
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS06500 pyruvate, water dikinase regulatory protein 0.63 QEN71_RS20400 succinate--CoA ligase subunit alpha 0.40 17
Serratia liquefaciens MT49 0.51 IAI46_11110 kinase/pyrophosphorylase 0.86 IAI46_06290 succinate--CoA ligase subunit alpha low > 86
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_07965 ppsR phosphoenolpyruvate synthase regulatory protein 0.72 OKGIIK_01765 sucD succinate--CoA ligase subunit alpha
Shewanella loihica PV-4 0.50 Shew_1548 hypothetical protein (RefSeq) 0.87 Shew_1658 succinyl-CoA synthetase, alpha subunit (RefSeq)
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS11795 PEP synthetase regulatory protein 0.65 RR42_RS31380 succinate--CoA ligase low > 128
Pantoea sp. MT58 0.50 IAI47_10910 kinase/pyrophosphorylase 0.84 IAI47_13730 succinate--CoA ligase subunit alpha
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS11920 pyruvate, water dikinase regulatory protein 0.52 ABZR87_RS07985 succinate--CoA ligase subunit alpha
Acidovorax sp. GW101-3H11 0.50 Ac3H11_207 FIG137360: hypothetical protein 0.52 Ac3H11_1251 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Pectobacterium carotovorum WPP14 0.50 HER17_RS08880 kinase/pyrophosphorylase 0.85 HER17_RS14915 succinate--CoA ligase subunit alpha low > 75
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS10960 PEP synthetase regulatory protein 0.52 HSERO_RS03285 succinyl-CoA synthetase subsunit alpha low > 78
Dickeya dianthicola ME23 0.50 DZA65_RS13345 kinase/pyrophosphorylase 0.84 DZA65_RS06860 succinate--CoA ligase subunit alpha low > 75
Paraburkholderia graminis OAS925 0.50 ABIE53_002487 regulator of PEP synthase PpsR (kinase-PPPase family) 0.51 ABIE53_003444 succinyl-CoA synthetase alpha subunit 0.27 27
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00626 hypothetical protein 0.51 H281DRAFT_04204 succinyl-CoA synthetase (ADP-forming) alpha subunit
Dickeya dianthicola 67-19 0.50 HGI48_RS12880 kinase/pyrophosphorylase 0.84 HGI48_RS06515 succinate--CoA ligase subunit alpha low > 71
Dickeya dadantii 3937 0.49 DDA3937_RS12810 kinase/pyrophosphorylase 0.84 DDA3937_RS06475 succinate--CoA ligase subunit alpha low > 74
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS12060 hypothetical protein 0.51 BPHYT_RS16340 succinyl-CoA synthetase subunit alpha low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF3919 FIG137360: hypothetical protein 0.52 GFF2505 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Lysobacter sp. OAE881 0.49 ABIE51_RS09530 pyruvate, water dikinase regulatory protein 0.69 ABIE51_RS04865 succinate--CoA ligase subunit alpha
Escherichia coli ECRC101 0.49 OKFHMN_27140 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 OKFHMN_06910 sucD succinate--CoA ligase subunit alpha
Escherichia coli ECOR27 0.49 NOLOHH_17660 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 NOLOHH_23300 sucD succinate--CoA ligase subunit alpha
Escherichia coli BW25113 0.49 b1703 ydiA hypothetical protein (NCBI) 0.86 b0729 sucD succinyl-CoA synthetase subunit alpha (NCBI) low > 76
Escherichia coli ECRC102 0.49 NIAGMN_00925 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 NIAGMN_04960 sucD succinate--CoA ligase subunit alpha
Escherichia coli ECOR38 0.49 HEPCGN_05505 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 HEPCGN_01320 sucD succinate--CoA ligase subunit alpha low > 85
Escherichia coli ECRC98 0.49 JDDGAC_01715 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 JDDGAC_10565 sucD succinate--CoA ligase subunit alpha
Escherichia coli ECRC101 0.49 MCAODC_18270 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 MCAODC_26130 sucD succinate--CoA ligase subunit alpha
Castellaniella sp019104865 MT123 0.49 ABCV34_RS04030 pyruvate, water dikinase regulatory protein 0.53 ABCV34_RS04430 succinate--CoA ligase subunit alpha
Escherichia fergusonii Becca 0.49 EFB2_02288 Phosphoenolpyruvate synthase regulatory protein 0.86 EFB2_03377 Succinate--CoA ligase [ADP-forming] subunit alpha low > 86
Escherichia coli Nissle 1917 0.49 ECOLIN_RS09520 posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 ECOLIN_RS03885 succinate--CoA ligase subunit alpha
Escherichia coli ECRC62 0.49 BNILDI_16450 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 BNILDI_21295 sucD succinate--CoA ligase subunit alpha
Escherichia coli BL21 0.49 ECD_01672 PEP synthase kinase and PEP synthase pyrophosphorylase 0.86 ECD_00688 succinyl-CoA synthetase, NAD(P)-binding, alpha subunit
Escherichia coli ECRC99 0.49 KEDOAH_00970 ppsR posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR 0.86 KEDOAH_21055 sucD succinate--CoA ligase subunit alpha
Variovorax sp. SCN45 0.48 GFF2819 Phosphoenolpyruvate synthase regulatory protein 0.52 GFF5406 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3537 FIG137360: hypothetical protein 0.87 GFF4642 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) low > 78
Variovorax sp. OAS795 0.48 ABID97_RS10810 pyruvate, water dikinase regulatory protein 0.53 ABID97_RS24470 succinate--CoA ligase subunit alpha
Enterobacter sp. TBS_079 0.48 MPMX20_01921 Phosphoenolpyruvate synthase regulatory protein 0.86 MPMX20_01357 Succinate--CoA ligase [ADP-forming] subunit alpha low > 85
Erwinia tracheiphila SCR3 0.48 LU632_RS11015 kinase/pyrophosphorylase 0.84 LU632_RS16080 sucD succinate--CoA ligase subunit alpha
Klebsiella michiganensis M5al 0.48 BWI76_RS17070 phosphoenolpyruvate synthase regulatory protein 0.87 BWI76_RS08430 succinate--CoA ligase subunit alpha 0.35 4
Enterobacter asburiae PDN3 0.47 EX28DRAFT_1705 Uncharacterized protein conserved in bacteria 0.86 EX28DRAFT_2263 succinyl-CoA synthetase, alpha subunit 0.70 1
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.2415.1 FIG137360: hypothetical protein 0.68 Xcc-8004.1356.1 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_19045 phosphoenolpyruvate synthase regulatory protein 0.86 CSW01_10415 succinate--CoA ligase subunit alpha low > 62
Magnetospirillum magneticum AMB-1 0.20 AMB_RS23020 kinase/pyrophosphorylase 0.65 AMB_RS20035 succinate--CoA ligase subunit alpha
Azospirillum sp. SherDot2 0.20 MPMX19_02558 Putative pyruvate, phosphate dikinase regulatory protein 0.62 MPMX19_00105 Succinate--CoA ligase [ADP-forming] subunit alpha
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS13670 kinase/pyrophosphorylase 0.51 A4249_RS14425 succinate--CoA ligase subunit alpha
Agrobacterium fabrum C58 0.20 Atu0001 hypothetical protein 0.56 Atu2637 succinyl-CoA synthetase alpha chain
Azospirillum brasilense Sp245 0.20 AZOBR_RS01755 hypothetical protein 0.61 AZOBR_RS14070 succinyl-CoA synthetase subsunit alpha low > 97
Bosea sp. OAE506 0.19 ABIE41_RS04660 pyruvate, water dikinase regulatory protein 0.62 ABIE41_RS08970 succinate--CoA ligase subunit alpha
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_2196 Uncharacterized protein conserved in bacteria 0.63 Ga0059261_1340 succinyl-CoA synthetase, alpha subunit
Caulobacter crescentus NA1000 0.19 CCNA_00001 ATP/GTP-binding protein 0.64 CCNA_00341 succinyl-CoA synthetase alpha chain
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00001 ATP/GTP-binding protein 0.64 CCNA_00341 succinyl-CoA synthetase alpha chain
Rhodopseudomonas palustris CGA009 0.19 TX73_001550 kinase/pyrophosphorylase 0.63 TX73_000985 succinate--CoA ligase subunit alpha
Rhodospirillum rubrum S1H 0.18 Rru_A3615 Protein of unknown function DUF299 (NCBI) 0.64 Rru_A1212 Succinyl-CoA ligase, alpha subunit (NCBI)
Rhizobium sp. OAE497 0.18 ABIE40_RS19240 pyruvate, water dikinase regulatory protein 0.57 ABIE40_RS17990 succinate--CoA ligase subunit alpha
Sinorhizobium meliloti 1021 0.17 SMc02793 hypothetical protein 0.57 SMc02481 succinyl-CoA synthetase subunit alpha

Not shown: 0 genomes with orthologs for Psest_2317 only; 13 genomes with orthologs for Psest_2490 only