| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 1.0 | GFF1663 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 1.0 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.37 | 19 |
| Escherichia coli ECRC99 | 0.98 | KEDOAH_01950 | cheY | chemotaxis regulatory protein CheY | 0.96 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.98 | OHPLBJKB_01846 | | Chemotaxis protein CheY | 0.96 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | low | > 73 |
| Escherichia coli BW25113 | 0.98 | b1882 | cheY | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | 0.96 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.98 | NIAGMN_01905 | cheY | chemotaxis regulatory protein CheY | 0.96 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECOR27 | 0.98 | NOLOHH_16595 | cheY | chemotaxis regulatory protein CheY | 0.96 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli ECRC101 | 0.98 | MCAODC_19250 | cheY | chemotaxis regulatory protein CheY | 0.96 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC100 | 0.98 | OKFHMN_26155 | cheY | chemotaxis regulatory protein CheY | 0.96 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC62 | 0.98 | BNILDI_15385 | cheY | chemotaxis regulatory protein CheY | 0.96 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli BL21 | 0.98 | ECD_01853 | | chemotaxis regulator transmitting signal to flagellar motor component | 0.96 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | — | — |
| Escherichia coli ECRC98 | 0.98 | JDDGAC_00730 | cheY | chemotaxis regulatory protein CheY | 0.96 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia fergusonii Becca | 0.98 | EFB2_02061 | | Chemotaxis protein CheY | 0.96 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | low | > 86 |
| Escherichia coli ECOR38 | 0.98 | HEPCGN_04575 | cheY | chemotaxis regulatory protein CheY | 0.96 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 87 |
| Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS10750 | | chemotaxis response regulator CheY | 0.96 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | — | — |
| Enterobacter sp. TBS_079 | 0.97 | MPMX20_02786 | | Chemotaxis protein CheY | 0.98 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | low | > 85 |
| Enterobacter asburiae PDN3 | 0.97 | EX28DRAFT_0674 | | Response regulator receiver domain | 0.98 | EX28DRAFT_4424 | | Transcriptional regulator | — | — |
| Serratia liquefaciens MT49 | 0.93 | IAI46_16010 | | chemotaxis response regulator CheY | 0.89 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.93 | HER17_RS08125 | | chemotaxis response regulator CheY | 0.90 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Dickeya dadantii 3937 | 0.92 | DDA3937_RS13520 | | chemotaxis response regulator CheY | 0.90 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Pantoea sp. MT58 | 0.92 | IAI47_08335 | | chemotaxis response regulator CheY | 0.90 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | low | > 76 |
| Dickeya dianthicola ME23 | 0.91 | DZA65_RS14050 | | chemotaxis protein CheY | 0.91 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Dickeya dianthicola 67-19 | 0.91 | HGI48_RS13565 | | chemotaxis response regulator CheY | 0.91 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | low | > 71 |
| Rahnella sp. WP5 | 0.91 | EX31_RS11355 | | chemotaxis protein CheY | 0.89 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.90 | LU632_RS13520 | cheY | chemotaxis response regulator CheY | 0.88 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Dechlorosoma suillum PS | 0.81 | Dsui_1719 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.35 | Dsui_0823 | | transcriptional regulator | 0.32 | 39 |
| Castellaniella sp019104865 MT123 | 0.78 | ABCV34_RS05810 | | chemotaxis response regulator CheY | 0.36 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Herbaspirillum seropedicae SmR1 | 0.78 | HSERO_RS10130 | | chemotaxis protein CheY | 0.36 | HSERO_RS18935 | | LysR family transcriptional regulator | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.78 | QEN71_RS28980 | | chemotaxis response regulator CheY | 0.34 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Variovorax sp. SCN45 | 0.77 | GFF5768 | | Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY | 0.33 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.77 | H281DRAFT_05748 | | response regulator receiver protein | 0.35 | H281DRAFT_04673 | | transcriptional regulator, LysR family | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.77 | ABIE53_000118 | | two-component system chemotaxis response regulator CheY | 0.34 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.76 | BPHYT_RS18965 | | chemotaxis protein CheY | 0.34 | BPHYT_RS03470 | | LysR family transcriptional regulator | low | > 109 |
| Cupriavidus basilensis FW507-4G11 | 0.76 | RR42_RS35780 | | chemotaxis protein CheY | 0.35 | RR42_RS17385 | | LysR family transcriptional regulator | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS17995 | | chemotaxis response regulator CheY | 0.35 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.74 | RPSI07_RS06225 | | chemotaxis protein CheY | 0.34 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.73 | RS_RS23890 | | chemotaxis protein CheY | 0.34 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | low | > 80 |
| Ralstonia solanacearum IBSBF1503 | 0.73 | RALBFv3_RS17420 | | chemotaxis protein CheY | 0.34 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | low | > 76 |
| Shewanella oneidensis MR-1 | 0.73 | SO3209 | cheY-3 | chemotaxis protein CheY (NCBI ptt file) | 0.26 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | low | > 76 |
| Ralstonia solanacearum UW163 | 0.73 | UW163_RS21730 | | chemotaxis protein CheY | 0.34 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | — | — |
| Shewanella loihica PV-4 | 0.73 | Shew_1384 | | response regulator receiver protein (RefSeq) | 0.25 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.73 | Shewana3_1360 | | response regulator receiver protein (RefSeq) | 0.26 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.73 | Sama_2279 | | response regulator receiver protein (RefSeq) | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.72 | MIT1002_01104 | | Chemotaxis protein CheY | 0.27 | MIT1002_01120 | | Morphology and auto-aggregation control protein | low | > 70 |
| Vibrio cholerae E7946 ATCC 55056 | 0.70 | CSW01_10330 | | chemotaxis protein CheY | 0.65 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.69 | GFF1435 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.30 | GFF2803 | | Hydrogen peroxide-inducible genes activator | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_2572 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.36 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | low | > 103 |
| Lysobacter sp. OAE881 | 0.68 | ABIE51_RS16870 | | chemotaxis response regulator CheY | 0.40 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | low | > 62 |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_03725 | | histidine kinase | 0.34 | AO356_12385 | | LysR family transcriptional regulator | low | > 104 |
| Dyella japonica UNC79MFTsu3.2 | 0.67 | ABZR86_RS20270 | | chemotaxis response regulator CheY | 0.41 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_3436 | | Response regulator receiver | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_3436 | | Response regulator receiver | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.67 | Xcc-8004.2833.1 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.42 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | low | > 74 |
| Marinobacter adhaerens HP15 | 0.67 | HP15_2301 | | response regulator receiver domain protein (CheY-) | 0.34 | HP15_308 | | oxidative stress regulatory protein OxyR | low | > 73 |
| Pseudomonas sp. S08-1 | 0.67 | OH686_02725 | | Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY | 0.35 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.67 | AO353_18790 | | histidine kinase | 0.34 | AO353_09315 | | LysR family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.66 | PfGW456L13_4330 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.34 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.66 | Psest_1741 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | 0.36 | Psest_4191 | | Transcriptional regulator | low | > 67 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS21655 | | response regulator | 0.35 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.66 | Pf1N1B4_3627 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.34 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | 0.39 | 12 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_19690 | | histidine kinase | 0.35 | PS417_27865 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS21655 | | response regulator | 0.35 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Rhodanobacter denitrificans FW104-10B01 | 0.66 | LRK54_RS13585 | | chemotaxis response regulator CheY | 0.42 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.66 | LRK55_RS13325 | | chemotaxis response regulator CheY | 0.42 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | low | > 63 |
| Pseudomonas sp. RS175 | 0.65 | PFR28_00853 | | Chemotaxis protein CheY | 0.34 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | low | > 88 |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_02835 | cheY | chemotaxis response regulator CheY | 0.42 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | low | > 52 |
| Pseudomonas putida KT2440 | 0.64 | PP_4340 | | response regulator for chemotactic signal transduction | 0.36 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | low | > 96 |
| Acidovorax sp. GW101-3H11 | 0.61 | Ac3H11_1387 | | Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY | 0.33 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | low | > 79 |
| Azospirillum brasilense Sp245 | 0.59 | AZOBR_RS12415 | | chemotaxis protein CheY | 0.36 | AZOBR_RS31340 | | LysR family transcriptional regulator | low | > 97 |
| Magnetospirillum magneticum AMB-1 | 0.59 | AMB_RS17710 | | response regulator | 0.30 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | low | > 64 |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_01605 | | Chemotaxis protein CheY | 0.35 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | low | > 112 |
| Rhodospirillum rubrum S1H | 0.57 | Rru_A2837 | | Response regulator receiver domain protein (CheY) (NCBI) | 0.37 | Rru_A0334 | | Transcriptional Regulator, LysR family (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.56 | TX73_006030 | | response regulator | 0.34 | TX73_002235 | | LysR substrate-binding domain-containing protein | low | > 86 |
| Caulobacter crescentus NA1000 | 0.55 | CCNA_00628 | | chemotaxis protein cheY | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.55 | CCNA_00628 | | chemotaxis protein cheY | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | — | — |
| Bosea sp. OAE506 | 0.53 | ABIE41_RS23275 | | response regulator | 0.30 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | low | > 77 |
| Sphingomonas koreensis DSMZ 15582 | 0.43 | Ga0059261_1116 | | Response regulator receiver domain | 0.30 | Ga0059261_0159 | | Transcriptional regulator | low | > 68 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.41 | A4249_RS15585 | | response regulator | 0.26 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | low | > 48 |
| Sinorhizobium meliloti 1021 | 0.33 | SMc03006 | | chemotaxis regulator protein | 0.34 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | low | > 103 |
| Rhizobium sp. OAE497 | 0.33 | ABIE40_RS02870 | | chemotaxis response regulator CheY1 | 0.30 | ABIE40_RS29270 | | LysR substrate-binding domain-containing protein | — | — |
| Agrobacterium fabrum C58 | 0.32 | Atu0516 | | chemotaxis receiver protein | 0.33 | Atu4641 | | LysR family transcriptional regulator | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.32 | PGA1_262p02090 | | response regulator receiver domain-containing protein | 0.31 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.28 | CA264_00200 | | response regulator | 0.30 | CA264_13765 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
Not shown: 2 genomes with orthologs for GFF1663 only; 13 genomes with orthologs for GFF2347 only