Conservation of cofitness between PS417_03830 and PS417_07515 in Pseudomonas simiae WCS417

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_03830 protein disaggregation chaperone 1.0 PS417_07515 aconitate hydratase 0.53 8
Pseudomonas fluorescens SBW25 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 0.94 PFLU_RS07595 aconitate hydratase AcnA low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS03880 ATP-dependent chaperone ClpB 0.94 PFLU_RS07595 aconitate hydratase AcnA low > 109
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_5129 ClpB protein 0.90 Pf6N2E2_2301 Aconitate hydratase (EC 4.2.1.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15935 ATP-dependent chaperone ClpB 0.89 AO356_02385 aconitate hydratase low > 104
Pseudomonas sp. RS175 0.97 PFR28_03746 Chaperone protein ClpB 0.89 PFR28_01099 Aconitate hydratase A low > 88
Pseudomonas fluorescens GW456-L13 0.96 PfGW456L13_1495 ClpB protein 0.88 PfGW456L13_4052 Aconitate hydratase (EC 4.2.1.3) low > 87
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_2824 ClpB protein 0.89 Pf1N1B4_3888 Aconitate hydratase (EC 4.2.1.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14230 ATP-dependent chaperone ClpB 0.89 AO353_00565 aconitate hydratase low > 101
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.86 Psyr_3404 aconitase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_0728 AAA ATPase, central region:Clp, N terminal:Clp, N terminal 0.86 Psyr_3404 aconitase low > 86
Pseudomonas putida KT2440 0.93 PP_0625 Chaperone protein ClpB 0.81 PP_2112 aconitate hydratase 1 low > 96
Pseudomonas stutzeri RCH2 0.90 Psest_0711 ATP-dependent chaperone ClpB 0.71 Psest_2521 aconitate hydratase 1 low > 67
Pseudomonas sp. S08-1 0.89 OH686_16420 ATP-dependent chaperone protein ClpB 0.79 OH686_02100 aconitate hydratase 1 low > 80
Marinobacter adhaerens HP15 0.75 HP15_529 protein disaggregation chaperone 0.73 HP15_3433 Aconitate hydratase (EC 4.2.1.3) (from data) low > 73
Lysobacter sp. OAE881 0.72 ABIE51_RS04925 ATP-dependent chaperone ClpB 0.60 ABIE51_RS11535 aconitate hydratase AcnA low > 62
Xanthomonas campestris pv. campestris strain 8004 0.71 Xcc-8004.1382.1 ClpB protein 0.60 Xcc-8004.2894.1 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) low > 74
Alteromonas macleodii MIT1002 0.71 MIT1002_02677 Heat shock protein F84.1 0.56 MIT1002_00380 Aconitate hydratase 1 low > 70
Enterobacter sp. TBS_079 0.70 MPMX20_03461 Chaperone protein ClpB 0.67 MPMX20_02499 Aconitate hydratase A low > 85
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_2535 ATP-dependent chaperone ClpB 0.52 B158DRAFT_0799 aconitate hydratase 1 low > 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF4184 ClpB protein 0.67 GFF2709 Aconitate hydratase (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) low > 78
Escherichia coli ECRC102 0.70 NIAGMN_19035 clpB ATP-dependent chaperone ClpB 0.67 NIAGMN_26745 acnA aconitate hydratase AcnA — —
Pantoea sp. MT58 0.70 IAI47_04435 ATP-dependent chaperone ClpB 0.67 IAI47_09250 aconitate hydratase AcnA low > 76
Escherichia fergusonii Becca 0.70 EFB2_01298 Chaperone protein ClpB 0.67 EFB2_02649 Aconitate hydratase A low > 86
Escherichia coli ECRC62 0.70 BNILDI_11745 clpB ATP-dependent chaperone ClpB 0.67 BNILDI_18390 acnA aconitate hydratase AcnA — —
Escherichia coli ECRC101 0.70 OKFHMN_21265 clpB ATP-dependent chaperone ClpB 0.67 OKFHMN_02575 acnA aconitate hydratase AcnA — —
Escherichia coli ECRC98 0.70 JDDGAC_24930 clpB ATP-dependent chaperone ClpB 0.67 JDDGAC_05120 acnA aconitate hydratase AcnA — —
Escherichia coli ECRC99 0.70 KEDOAH_06955 clpB ATP-dependent chaperone ClpB 0.67 KEDOAH_26190 acnA aconitate hydratase AcnA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_01114 Chaperone protein ClpB 0.67 OHPLBJKB_02406 Aconitate hydratase A low > 73
Escherichia coli BW25113 0.70 b2592 clpB protein disaggregation chaperone (NCBI) 0.67 b1276 acnA aconitate hydratase (NCBI) low > 76
Escherichia coli BL21 0.70 ECD_02482 protein disaggregation chaperone 0.67 ECD_01253 aconitate hydratase 1; aconitase A low > 60
Escherichia coli Nissle 1917 0.70 ECOLIN_RS14665 ATP-dependent chaperone ClpB 0.67 ECOLIN_RS07705 aconitate hydratase AcnA — —
Escherichia coli ECRC101 0.70 MCAODC_11795 clpB ATP-dependent chaperone ClpB 0.67 MCAODC_15690 acnA aconitate hydratase AcnA — —
Escherichia coli ECOR27 0.70 NOLOHH_12940 clpB ATP-dependent chaperone ClpB 0.67 NOLOHH_20240 acnA aconitate hydratase AcnA low > 57
Escherichia coli ECOR38 0.70 HEPCGN_20390 clpB ATP-dependent chaperone ClpB 0.67 HEPCGN_25625 acnA aconitate hydratase AcnA low > 85
Klebsiella michiganensis M5al 0.70 BWI76_RS21440 ATP-dependent chaperone ClpB 0.67 BWI76_RS11940 aconitate hydratase 1 low > 92
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.66 EX28DRAFT_0949 aconitate hydratase 1 low > 76
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS10940 ATP-dependent chaperone ClpB 0.59 ABZR86_RS02165 aconitate hydratase AcnA low > 74
Rhodanobacter sp. FW510-T8 0.70 OKGIIK_01800 clpB ATP-dependent chaperone ClpB 0.58 OKGIIK_06455 acnA aconitate hydratase AcnA — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS05410 ATP-dependent chaperone ClpB 0.65 HER17_RS09315 aconitate hydratase AcnA 0.53 61
Rhodanobacter denitrificans MT42 0.70 LRK55_RS04735 ATP-dependent chaperone ClpB 0.57 LRK55_RS00560 aconitate hydratase AcnA — —
Rhodanobacter denitrificans FW104-10B01 0.69 LRK54_RS04955 ATP-dependent chaperone ClpB 0.57 LRK54_RS00785 aconitate hydratase AcnA — —
Dickeya dianthicola ME23 0.69 DZA65_RS17320 ATP-dependent chaperone ClpB 0.62 DZA65_RS13065 aconitate hydratase AcnA low > 75
Dickeya dianthicola 67-19 0.69 HGI48_RS16225 ATP-dependent chaperone ClpB 0.62 HGI48_RS12610 aconitate hydratase AcnA low > 71
Rahnella sp. WP5 0.69 EX31_RS07560 ATP-dependent chaperone ClpB 0.69 EX31_RS09885 aconitate hydratase AcnA low > 89
Dickeya dadantii 3937 0.69 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.63 DDA3937_RS12555 aconitate hydratase AcnA low > 74
Serratia liquefaciens MT49 0.69 IAI46_03995 ATP-dependent chaperone ClpB 0.68 IAI46_13950 aconitate hydratase AcnA low > 86
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS22370 ATP-dependent chaperone ClpB 0.51 QEN71_RS17535 aconitate hydratase AcnA low > 153
Paraburkholderia graminis OAS925 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB 0.42 ABIE53_004758 aconitate hydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.51 H281DRAFT_06606 aconitase — —
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.50 BPHYT_RS33980 aconitate hydratase low > 109
Acinetobacter radioresistens SK82 0.66 MPMX26_01096 Chaperone protein ClpB 0.72 MPMX26_00480 Aconitate hydratase A — —
Dechlorosoma suillum PS 0.66 Dsui_2161 ATP-dependent chaperone ClpB 0.49 Dsui_2347 aconitate hydratase 1 low > 51
Ralstonia solanacearum UW163 0.65 UW163_RS13360 ATP-dependent chaperone ClpB 0.50 UW163_RS11035 aconitate hydratase AcnA — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS00030 ATP-dependent chaperone ClpB 0.50 RALBFv3_RS02690 aconitate hydratase AcnA — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS10545 protein disaggregation chaperone 0.50 HSERO_RS14940 aconitate hydratase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3942 ClpB protein 0.50 GFF3382 Aconitate hydratase (EC 4.2.1.3) 0.49 66
Ralstonia solanacearum PSI07 0.64 RPSI07_RS17450 ATP-dependent chaperone ClpB 0.50 RPSI07_RS14625 aconitate hydratase AcnA — —
Ralstonia solanacearum GMI1000 0.64 RS_RS06695 chaperone protein ClpB 0.50 RS_RS10065 aconitate hydratase AcnA 0.50 12
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS12455 protein disaggregation chaperone 0.49 RR42_RS14490 aconitate hydratase 0.28 102
Ralstonia sp. UNC404CL21Col 0.64 ABZR87_RS11485 ATP-dependent chaperone ClpB 0.50 ABZR87_RS14605 aconitate hydratase AcnA low > 80
Acidovorax sp. GW101-3H11 0.64 Ac3H11_1474 ClpB protein 0.49 Ac3H11_1140 2-methylisocitrate dehydratase (EC 4.2.1.99) (from data) low > 79
Variovorax sp. SCN45 0.64 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.49 GFF3909 Aconitate hydratase (EC 4.2.1.3) low > 127
Variovorax sp. OAS795 0.64 ABID97_RS10930 ATP-dependent chaperone ClpB 0.50 ABID97_RS08550 aconitate hydratase AcnA low > 91
Castellaniella sp019104865 MT123 0.62 ABCV34_RS06205 ATP-dependent chaperone ClpB 0.57 ABCV34_RS13800 aconitate hydratase AcnA low > 48
Azospirillum sp. SherDot2 0.60 MPMX19_02442 Chaperone protein ClpB 0.64 MPMX19_02045 Aconitate hydratase A low > 112
Azospirillum brasilense Sp245 0.59 AZOBR_RS18950 ATPase AAA 0.63 AZOBR_RS02985 aconitate hydratase low > 97
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_1434 ATP-dependent chaperone ClpB 0.60 Ga0059261_3296 aconitate hydratase 1 — —
Rhodospirillum rubrum S1H 0.58 Rru_A0753 Chaperone clpB (NCBI) 0.63 Rru_A3511 Aconitate hydratase 1 (NCBI) — —
Magnetospirillum magneticum AMB-1 0.58 AMB_RS07865 ATP-dependent chaperone ClpB 0.49 AMB_RS18485 aconitate hydratase AcnA low > 64
Rhizobium sp. OAE497 0.58 ABIE40_RS17260 ATP-dependent chaperone ClpB 0.60 ABIE40_RS18275 aconitate hydratase AcnA — —
Bosea sp. OAE506 0.57 ABIE41_RS23785 ATP-dependent chaperone ClpB 0.62 ABIE41_RS04965 aconitate hydratase AcnA — —
Agrobacterium fabrum C58 0.57 Atu4177 ATP-dependent Clp protease, ATP-binding subunit 0.60 Atu2685 aconitate hydratase 0.30 10
Sinorhizobium meliloti 1021 0.57 SMc02433 ATP-dependent protease 0.60 SMc03846 aconitate hydratase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS11010 ATP-dependent chaperone ClpB 0.60 A4249_RS12770 aconitate hydratase AcnA — —
Caulobacter crescentus NA1000 0.56 CCNA_00922 ClpB protein 0.61 CCNA_03781 aconitate hydratase — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_00922 ClpB protein 0.61 CCNA_03781 aconitate hydratase — —
Dinoroseobacter shibae DFL-12 0.56 Dshi_0617 ATPase AAA-2 domain protein (RefSeq) 0.60 Dshi_1851 aconitate hydratase 1 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.56 PGA1_c32440 chaperone protein ClpB 0.59 PGA1_c18830 aconitate hydratase AcnA — —
Rhodopseudomonas palustris CGA009 0.56 TX73_023005 ATP-dependent chaperone ClpB 0.60 TX73_001045 aconitate hydratase AcnA — —
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_0567 ATP-dependent chaperone ClpB (RefSeq) 0.07 DvMF_3021 aconitate hydratase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.54 Rv0384c Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) 0.54 Rv1475c Probable iron-regulated aconitate hydratase Acn (citrate hydro-lyase) (aconitase) — —
Bifidobacterium breve UCC2003 0.52 BBR_RS19700 ATP-dependent chaperone ClpB 0.53 BBR_RS16600 aconitate hydratase AcnA 0.91 7
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_0754 ATP-dependent chaperone ClpB 0.53 Echvi_4039 aconitate hydratase 1 low > 79

Not shown: 18 genomes with orthologs for PS417_03830 only; 0 genomes with orthologs for PS417_07515 only