| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Marinobacter adhaerens HP15 | 1.0 | HP15_1490 | | conserved hypothetical protein | 1.0 | HP15_1004 | | 3-methylcrotonyl CoA carboxylase, beta subunit | 0.44 | 4 |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_1259 | | 23S rRNA m2A2503 methyltransferase | 0.75 | Psest_1083 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 67 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.71 | Psyr_1245 | | 23S rRNA m(2)A-2503 methyltransferase | 0.77 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.71 | Psyr_1245 | | 23S rRNA m(2)A-2503 methyltransferase | 0.77 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.70 | PfGW456L13_4865 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.78 | PfGW456L13_2590 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.70 | OH686_17515 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase | 0.76 | OH686_00850 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.70 | AO353_15875 | | 23S rRNA (adenine(2503)-C2)-methyltransferase | 0.77 | AO353_20345 | | methylcrotonoyl-CoA carboxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.70 | Pf6N2E2_3181 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.78 | Pf6N2E2_2192 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.70 | Pf1N1B4_857 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.79 | Pf1N1B4_3986 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | — | — |
| Pseudomonas simiae WCS417 | 0.70 | PS417_23160 | | 50S rRNA methyltransferase | 0.77 | PS417_17020 | | methylcrotonoyl-CoA carboxylase | — | — |
| Pseudomonas sp. RS175 | 0.70 | PFR28_00294 | | Dual-specificity RNA methyltransferase RlmN | 0.77 | PFR28_01259 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS24815 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.77 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS24815 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.77 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.70 | AO356_06605 | | 23S rRNA (adenine(2503)-C2)-methyltransferase | 0.77 | AO356_01585 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 104 |
| Pseudomonas putida KT2440 | 0.68 | PP_0850 | | Dual-specificity RNA methyltransferase RlmN | 0.77 | PP_4065 | | methylcrotonyl-CoA carboxylase biotin-containing subunit beta | low | > 96 |
| Kangiella aquimarina DSM 16071 | 0.60 | B158DRAFT_1149 | | 23S rRNA m2A2503 methyltransferase | 0.77 | B158DRAFT_2509 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | — | — |
| Acinetobacter radioresistens SK82 | 0.60 | MPMX26_00426 | | Dual-specificity RNA methyltransferase RlmN | 0.76 | MPMX26_00631 | | Propionyl-CoA carboxylase beta chain | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.57 | LRK54_RS00070 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.71 | LRK54_RS15255 | | methylcrotonoyl-CoA carboxylase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.57 | LRK55_RS18065 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.71 | LRK55_RS14970 | | carboxyl transferase domain-containing protein | low | > 63 |
| Lysobacter sp. OAE881 | 0.57 | ABIE51_RS09415 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.69 | ABIE51_RS13160 | | carboxyl transferase domain-containing protein | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.57 | ABZR87_RS10900 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.75 | ABZR87_RS06280 | | carboxyl transferase domain-containing protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.57 | RS_RS06070 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.74 | RS_RS01320 | | methylcrotonoyl-CoA carboxylase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS18115 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.75 | RPSI07_RS22835 | | methylcrotonoyl-CoA carboxylase | low | > 81 |
| Ralstonia solanacearum IBSBF1503 | 0.56 | RALBFv3_RS15260 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.74 | RALBFv3_RS10480 | | methylcrotonoyl-CoA carboxylase | — | — |
| Ralstonia solanacearum UW163 | 0.56 | UW163_RS12725 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.74 | UW163_RS03100 | | methylcrotonoyl-CoA carboxylase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.56 | OKGIIK_07140 | rlmN | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.73 | OKGIIK_04015 | | Methylcrotonoyl-CoA carboxylase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.56 | Xcc-8004.2737.1 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.69 | Xcc-8004.319.1 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.56 | ABZR86_RS05455 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.72 | ABZR86_RS20580 | | carboxyl transferase domain-containing protein | low | > 74 |
| Dechlorosoma suillum PS | 0.56 | Dsui_3145 | | 23S rRNA m2A2503 methyltransferase | 0.75 | Dsui_0980 | | acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS13155 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.74 | RR42_RS26905 | | methylcrotonoyl-CoA carboxylase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS05965 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.73 | QEN71_RS12865 | | carboxyl transferase domain-containing protein | low | > 153 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS14810 | | 50S rRNA methyltransferase | 0.74 | HSERO_RS23455 | | methylcrotonoyl-CoA carboxylase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_00514 | | 23S rRNA m(2)A-2503 methyltransferase | 0.74 | H281DRAFT_01345 | | 3-methylcrotonyl-CoA carboxylase beta subunit | — | — |
| Shewanella amazonensis SB2B | 0.54 | Sama_2368 | | hypothetical protein (RefSeq) | 0.78 | Sama_1361 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.43 | 54 |
| Shewanella sp. ANA-3 | 0.54 | Shewana3_1226 | | hypothetical protein (RefSeq) | 0.78 | Shewana3_1671 | | carboxyl transferase (RefSeq) | low | > 73 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS12590 | | dual-specificity RNA methyltransferase RlmN | 0.74 | BPHYT_RS23265 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_002744 | | 23S rRNA (adenine2503-C2)-methyltransferase | 0.74 | ABIE53_005466 | | 3-methylcrotonyl-CoA carboxylase beta subunit | low | > 113 |
| Shewanella oneidensis MR-1 | 0.54 | SO3315 | | conserved hypothetical protein TIGR00048 (NCBI ptt file) | 0.78 | SO1896 | pccB-1 | 3-methylcrotonyl CoA carboxylase, beta subunit (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.54 | MIT1002_02791 | | Dual-specificity RNA methyltransferase RlmN | 0.74 | MIT1002_01668 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 70 |
| Variovorax sp. OAS795 | 0.53 | ABID97_RS14210 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.70 | ABID97_RS25130 | | carboxyl transferase domain-containing protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_1791 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.73 | Ac3H11_3010 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | — | — |
| Variovorax sp. SCN45 | 0.53 | GFF992 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase @ tRNA (adenine(37)-C(2))-methyltransferase (EC 2.1.1.192) | 0.71 | GFF2008 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.73 | 18 |
| Shewanella loihica PV-4 | 0.53 | Shew_1287 | | hypothetical protein (RefSeq) | 0.78 | Shew_2571 | | propionyl-CoA carboxylase (RefSeq) | low | > 60 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.53 | GFF4866 | | Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) | 0.73 | GFF1715 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.51 | ABCV34_RS02610 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.70 | ABCV34_RS12355 | | carboxyl transferase domain-containing protein | 0.77 | 23 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS00800 | | 50S rRNA methyltransferase | 0.76 | AZOBR_RS22295 | | methylcrotonoyl-CoA carboxylase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.45 | MPMX19_02413 | | Dual-specificity RNA methyltransferase RlmN | 0.75 | MPMX19_03938 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 112 |
| Caulobacter crescentus NA1000 | 0.44 | CCNA_00133 | | radical SAM family enzyme | 0.68 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 66 |
| Magnetospirillum magneticum AMB-1 | 0.44 | AMB_RS05715 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.74 | AMB_RS03475 | | methylcrotonoyl-CoA carboxylase | low | > 64 |
| Caulobacter crescentus NA1000 Δfur | 0.44 | CCNA_00133 | | radical SAM family enzyme | 0.68 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.43 | A4249_RS12865 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.69 | A4249_RS03795 | | carboxyl transferase domain-containing protein | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.43 | PGA1_c36240 | | ribosomal RNA large subunit methyltransferase N | 0.69 | PGA1_c10320 | | methylcrotonoyl-CoA carboxylase beta chain | — | — |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_002060 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.69 | TX73_013115 | | carboxyl transferase domain-containing protein | low | > 86 |
| Dinoroseobacter shibae DFL-12 | 0.41 | Dshi_3311 | | radical SAM enzyme, Cfr family (RefSeq) | 0.66 | Dshi_1300 | | Propionyl-CoA carboxylase (RefSeq) | low | > 64 |
| Sphingomonas koreensis DSMZ 15582 | 0.41 | Ga0059261_1407 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase | 0.68 | Ga0059261_4055 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | 0.30 | 41 |
| Agrobacterium fabrum C58 | 0.41 | Atu2673 | | hypothetical protein | 0.73 | Atu3478 | | 3-methylcrotonoyl-CoA carboxylase beta subunit | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.41 | SMc03831 | | hypothetical protein | 0.72 | SM_b21122 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 103 |
| Rhizobium sp. OAE497 | 0.41 | ABIE40_RS18200 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.72 | ABIE40_RS20780 | | carboxyl transferase domain-containing protein | low | > 107 |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS04880 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.70 | ABIE41_RS14815 | | carboxyl transferase domain-containing protein | low | > 77 |
| Bacteroides ovatus ATCC 8483 | 0.35 | BACOVA_05204 | | 23S rRNA m2A2503 methyltransferase | 0.23 | BACOVA_01463 | | carboxyl transferase domain protein | low | > 94 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.35 | Echvi_0755 | | 23S rRNA m2A2503 methyltransferase | 0.44 | Echvi_0113 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 79 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.34 | BT4372 | | conserved hypothetical protein (NCBI ptt file) | 0.23 | BT1917 | | propionyl-CoA carboxylase beta chain (NCBI ptt file) | low | > 81 |
| Bacteroides stercoris CC31F | 0.34 | HMPREF1181_RS05775 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.22 | HMPREF1181_RS13215 | | acyl-CoA carboxylase subunit beta | — | — |
| Phocaeicola dorei CL03T12C01 | 0.33 | ABI39_RS12945 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.23 | ABI39_RS12425 | | acyl-CoA carboxylase subunit beta | low | > 72 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.33 | CA265_RS19115 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase | 0.47 | CA265_RS10640 | | methylcrotonoyl-CoA carboxylase | low | > 88 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.33 | CA264_15910 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.46 | CA264_20625 | | methylcrotonoyl-CoA carboxylase | low | > 74 |
| Phocaeicola vulgatus CL09T03C04 | 0.33 | HMPREF1058_RS17025 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.22 | HMPREF1058_RS16505 | | acyl-CoA carboxylase subunit beta | low | > 67 |
| Fusobacterium nucleatum SB010 | 0.31 | HUW76_07445 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.14 | HUW76_02535 | | glutaconyl-CoA decarboxylase subunit alpha | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.31 | ABZR88_RS00655 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.45 | ABZR88_RS10315 | | acyl-CoA carboxylase subunit beta | low | > 71 |
| Parabacteroides merdae CL09T00C40 | 0.31 | HMPREF1078_RS14530 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.26 | HMPREF1078_RS00210 | | acyl-CoA carboxylase subunit beta | low | > 61 |
| Bifidobacterium breve UCC2003 | 0.28 | BBR_RS16105 | | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | 0.23 | BBR_RS19375 | | acyl-CoA carboxylase subunit beta | low | > 34 |
Not shown: 29 genomes with orthologs for HP15_1490 only; 2 genomes with orthologs for HP15_1004 only