| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_02659 | | glycine cleavage system transcriptional activator; autorepressor | 1.0 | ECD_02179 | | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent | 0.77 | 3 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_08010 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.95 | KEDOAH_05200 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
| Escherichia coli ECRC62 | 1.00 | BNILDI_10505 | gcvA | glycine cleavage system transcriptional regulator GcvA | 1.00 | BNILDI_13535 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_20120 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.95 | OKFHMN_22995 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 80 |
| Escherichia fergusonii Becca | 1.00 | EFB2_01109 | | Glycine cleavage system transcriptional activator | 0.95 | EFB2_01603 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS15650 | | glycine cleavage system transcriptional regulator GcvA | 0.97 | ECOLIN_RS13125 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 55 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_12000 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.99 | NOLOHH_14620 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Escherichia coli BW25113 | 1.00 | b2808 | gcvA | DNA-binding transcriptional dual regulator (NCBI) | 0.99 | b2253 | arnB | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) | low | > 76 |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_19375 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.99 | HEPCGN_22210 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 87 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_17890 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.95 | NIAGMN_20765 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_10645 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.95 | MCAODC_14035 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 87 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_23785 | gcvA | glycine cleavage system transcriptional regulator GcvA | 0.95 | JDDGAC_26960 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00923 | | Glycine cleavage system transcriptional activator | 1.00 | OHPLBJKB_01458 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.99 | GFF4865 | | Glycine cleavage system transcriptional activator GcvA | 0.84 | GFF1858 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.98 | EX28DRAFT_2883 | | Transcriptional regulator | 0.81 | EX28DRAFT_4082 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | low | > 76 |
| Enterobacter sp. TBS_079 | 0.97 | MPMX20_03671 | | Glycine cleavage system transcriptional activator | 0.81 | MPMX20_04380 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 85 |
| Klebsiella michiganensis M5al | 0.97 | BWI76_RS22955 | | transcriptional regulator GcvA | 0.79 | BWI76_RS26485 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 92 |
| Pantoea sp. MT58 | 0.93 | IAI47_04025 | | transcriptional regulator GcvA | 0.71 | IAI47_21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.93 | LU632_RS06255 | | transcriptional regulator GcvA | 0.78 | LU632_RS16495 | arnB | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Dickeya dadantii 3937 | 0.93 | DDA3937_RS05050 | | transcriptional regulator GcvA | 0.78 | DDA3937_RS21390 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 74 |
| Dickeya dianthicola ME23 | 0.93 | DZA65_RS05390 | | transcriptional regulator GcvA | 0.77 | DZA65_RS22610 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.93 | HGI48_RS05050 | | transcriptional regulator GcvA | 0.77 | HGI48_RS21625 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.92 | HER17_RS16415 | | transcriptional regulator GcvA | 0.72 | HER17_RS06520 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 75 |
| Serratia liquefaciens MT49 | 0.91 | IAI46_20340 | | transcriptional regulator GcvA | 0.71 | IAI46_11015 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | 0.35 | 53 |
| Rahnella sp. WP5 | 0.89 | EX31_RS13110 | | transcriptional regulator GcvA | 0.70 | EX31_RS14020 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 89 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_2894 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.27 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.70 | SO1533 | | glycine cleavage system transcriptional activator, putative (NCBI ptt file) | 0.24 | SO3270 | | polysaccharide biosynthesis protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.70 | Shew_2764 | | DNA-binding transcriptional activator GcvA (RefSeq) | 0.25 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_01520 | | Gcv operon activator | 0.25 | MIT1002_01078 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | low | > 70 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS20105 | | transcriptional regulator | 0.30 | AZOBR_RS33710 | | putative aminotransferase | low | > 97 |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A3368 | | Transcriptional Regulator, LysR family (NCBI) | 0.31 | Rru_A2746 | | DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) | low | > 58 |
| Pseudomonas fluorescens FW300-N2E2 | 0.38 | Pf6N2E2_1560 | | Glycine cleavage system transcriptional activator GcvA | 0.27 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.38 | ABIE53_001336 | | LysR family glycine cleavage system transcriptional activator | 0.32 | ABIE53_002021 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.38 | A4249_RS09680 | | transcriptional regulator GcvA | 0.19 | A4249_RS13795 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.38 | CCNA_01174 | | LysR-family transcriptional regulator | 0.30 | CCNA_00234 | | WecE-family cell wall biogenesis enzyme | low | > 67 |
| Caulobacter crescentus NA1000 | 0.38 | CCNA_01174 | | LysR-family transcriptional regulator | 0.30 | CCNA_00234 | | WecE-family cell wall biogenesis enzyme | low | > 66 |
| Ralstonia solanacearum GMI1000 | 0.36 | RS_RS13815 | | transcriptional regulator GcvA | 0.30 | RS_RS06630 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS22095 | | transcriptional regulator GcvA | 0.31 | RALBFv3_RS15850 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS22635 | | transcriptional regulator GcvA | 0.31 | UW163_RS13295 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.36 | ABZR87_RS01495 | | transcriptional regulator GcvA | 0.30 | ABZR87_RS11420 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.36 | ABZR86_RS20860 | | transcriptional regulator GcvA | 0.21 | ABZR86_RS18520 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 74 |
| Ralstonia solanacearum PSI07 | 0.35 | RPSI07_RS11375 | | transcriptional regulator GcvA | 0.32 | RPSI07_RS17515 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS11810 | | LysR family transcriptional regulator | 0.32 | BPHYT_RS08930 | | aminotransferase DegT | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_02051 | | LysR family transcriptional regulator, glycine cleavage system transcriptional activator | 0.33 | H281DRAFT_00805 | | dTDP-4-amino-4,6-dideoxygalactose transaminase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.34 | Ga0059261_4130 | | Transcriptional regulator | 0.22 | Ga0059261_3110 | | Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS01310 | | transcriptional regulator GcvA | 0.32 | QEN71_RS22430 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS26815 | | LysR family transcriptional regulator | 0.36 | RR42_RS15735 | | pyridoxal phosphate-dependent aminotransferase | low | > 128 |
| Magnetospirillum magneticum AMB-1 | 0.32 | AMB_RS04220 | | transcriptional regulator GcvA | 0.30 | AMB_RS00560 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Variovorax sp. SCN45 | 0.32 | GFF1355 | | Transcriptional regulator, LysR family | 0.22 | GFF6876 | | Aminotransferase, DegT/DnrJ/EryC1/StrS family | low | > 127 |
| Pseudomonas fluorescens FW300-N2C3 | 0.32 | AO356_15125 | | LysR family transcriptional regulator | 0.24 | AO356_03400 | | aminotransferase DegT | low | > 104 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_01927 | | Glycine cleavage system transcriptional activator | 0.19 | MPMX26_00061 | | GDP-perosamine synthase | — | — |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS29015 | | transcriptional regulator GcvA | 0.40 | ABID97_RS02145 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS07925 | | LysR family transcriptional regulator | 0.32 | HSERO_RS10435 | | aminotransferase DegT | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.31 | Pf1N1B4_72 | | Transcriptional regulator, LysR family | 0.29 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 87 |
| Pseudomonas simiae WCS417 | 0.31 | PS417_14890 | | LysR family transcriptional regulator | 0.31 | PS417_27245 | | aminotransferase DegT | low | > 88 |
| Acidovorax sp. GW101-3H11 | 0.31 | Ac3H11_902 | | Glycine cleavage system transcriptional activator | 0.19 | Ac3H11_1545 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | — | — |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS16910 | | LysR family transcriptional regulator | 0.31 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_4953 | | Glycine cleavage system transcriptional activator | 0.26 | PfGW456L13_4370 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS16910 | | LysR family transcriptional regulator | 0.31 | PFLU_RS28905 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.30 | Psyr_3521 | | transcriptional regulator, LysR family | 0.63 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.30 | Psyr_3521 | | transcriptional regulator, LysR family | 0.63 | Psyr_2689 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 86 |
| Sinorhizobium meliloti 1021 | 0.30 | SMa0179 | | LysR family transcriptional regulator | 0.18 | SM_b21248 | | aminotransferase | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_15505 | | LysR family transcriptional regulator | 0.69 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | low | > 101 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.30 | DVU1402 | | transcriptional regulator, LysR family (TIGR) | 0.32 | DVU3010 | lpsC | aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) | low | > 55 |
| Pseudomonas stutzeri RCH2 | 0.29 | Psest_2739 | | Transcriptional regulator | 0.29 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | — | — |
| Pseudomonas sp. RS175 | 0.29 | PFR28_04727 | | Glycine cleavage system transcriptional activator | 0.29 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.29 | LRK54_RS06630 | | transcriptional regulator GcvA | 0.20 | LRK54_RS05160 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.29 | LRK55_RS06375 | | transcriptional regulator GcvA | 0.20 | LRK55_RS04940 | | DegT/DnrJ/EryC1/StrS family aminotransferase | low | > 63 |
| Phaeobacter inhibens DSM 17395 | 0.28 | PGA1_c15720 | | putative glycine cleavage system transcriptional activator | 0.23 | PGA1_c05070 | | putative pyridoxal-phosphate-dependent aminotransferase | low | > 62 |
| Marinobacter adhaerens HP15 | 0.28 | HP15_1669 | | transcriptional regulator, LysR family protein | 0.28 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | — | — |
| Dechlorosoma suillum PS | 0.27 | Dsui_2033 | | transcriptional regulator | 0.27 | Dsui_0082 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_3068 | | transcriptional regulator, LysR family (RefSeq) | 0.14 | Dshi_2228 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | low | > 64 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.1418.1 | | Glycine cleavage system transcriptional activator | 0.21 | Xcc-8004.4490.1 | | Lipopolysaccharide biosynthesis protein RffA | — | — |
| Rhodopseudomonas palustris CGA009 | 0.22 | TX73_013680 | | LysR substrate-binding domain-containing protein | 0.20 | TX73_020615 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.20 | OKGIIK_16180 | | Biotin transporter BioY | 0.35 | OKGIIK_10755 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | low | > 52 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.11 | CA265_RS22285 | | LysR family transcriptional regulator | 0.24 | CA265_RS01760 | | aminotransferase DegT | low | > 88 |