Conservation of cofitness between DZA65_RS17455 and DZA65_RS00935 in Dickeya dianthicola ME23

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS17455 nicotinamide-nucleotide amidase 1.0 DZA65_RS00935 N-acetyl-gamma-glutamyl-phosphate reductase 0.61 2
Dickeya dianthicola 67-19 0.99 HGI48_RS16360 nicotinamide-nucleotide amidase 0.98 HGI48_RS00875 N-acetyl-gamma-glutamyl-phosphate reductase low > 71
Dickeya dadantii 3937 0.95 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.99 DDA3937_RS20350 N-acetyl-gamma-glutamyl-phosphate reductase low > 74
Pectobacterium carotovorum WPP14 0.69 HER17_RS05040 nicotinamide-nucleotide amidase 0.89 HER17_RS20630 N-acetyl-gamma-glutamyl-phosphate reductase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.77 GFF2344 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 78
Escherichia coli BW25113 0.61 b2700 ygaD competence damage-inducible protein A (NCBI) 0.77 b3958 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.77 OHPLBJKB_04092 N-acetyl-gamma-glutamyl-phosphate reductase low > 74
Escherichia coli ECRC62 0.61 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.77 BNILDI_05795 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.76 ECOLIN_RS22845 N-acetyl-gamma-glutamyl-phosphate reductase low > 55
Rahnella sp. WP5 0.61 EX31_RS07805 nicotinamide-nucleotide amidase 0.85 EX31_RS14190 N-acetyl-gamma-glutamyl-phosphate reductase low > 89
Escherichia coli BL21 0.61 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.77 ECD_03843 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding low > 61
Escherichia coli ECRC101 0.61 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.76 MCAODC_04085 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.27 44
Enterobacter asburiae PDN3 0.61 EX28DRAFT_2786 amidohydrolase, PncC family 0.79 EX28DRAFT_4420 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 76
Escherichia coli ECRC100 0.61 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.76 OKFHMN_13585 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 79
Escherichia coli ECRC98 0.61 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.76 JDDGAC_17210 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 87
Escherichia coli ECRC102 0.61 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.76 NIAGMN_11335 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 80
Serratia liquefaciens MT49 0.61 IAI46_03835 nicotinamide-nucleotide amidase 0.84 IAI46_24515 N-acetyl-gamma-glutamyl-phosphate reductase 0.56 13
Escherichia coli ECRC99 0.61 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.76 KEDOAH_14575 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Enterobacter sp. TBS_079 0.61 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.78 MPMX20_04522 N-acetyl-gamma-glutamyl-phosphate reductase low > 85
Escherichia fergusonii Becca 0.61 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.76 EFB2_04656 N-acetyl-gamma-glutamyl-phosphate reductase low > 86
Escherichia coli ECOR27 0.61 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.77 NOLOHH_05730 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 76
Escherichia coli ECOR38 0.61 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.76 HEPCGN_12230 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 88
Pantoea sp. MT58 0.60 IAI47_04295 nicotinamide-nucleotide amidase 0.81 IAI47_00905 N-acetyl-gamma-glutamyl-phosphate reductase low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS22185 hypothetical protein 0.80 BWI76_RS00845 N-acetyl-gamma-glutamyl-phosphate reductase low > 92
Klebsiella pneumoniae MKP103 0.59 KDGMDA_02855 nicotinamide-nucleotide amidase 0.79 KDGMDA_09365 N-acetyl-gamma-glutamyl-phosphate reductase 0.23 82
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS16675 nicotinamide-nucleotide amidase 0.81 PagCFBP13505_RS18435 N-acetyl-gamma-glutamyl-phosphate reductase low > 74
Erwinia tracheiphila SCR3 0.58 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.79 LU632_RS19615 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_01630 pncC nicotinamide-nucleotide amidase 0.80 IJEDHG_13045 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 61
Erwinia amylovora T8 0.56 OLJFJH_09570 nicotinamide-nucleotide amidase 0.13 OLJFJH_15175 N-acetyl-gamma-glutamyl-phosphate reductase low > 58
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.19 Xcc-8004.2322.1 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 74
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_03735 pncC damage-inducible protein CinA 0.17 OKGIIK_09435 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 53
Rhodanobacter denitrificans MT42 0.52 LRK55_RS14690 CinA family protein 0.18 LRK55_RS02140 N-acetyl-gamma-glutamyl-phosphate reductase low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS14975 CinA family protein 0.18 LRK54_RS02385 N-acetyl-gamma-glutamyl-phosphate reductase low > 59
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS00655 CinA family protein 0.19 ABZR86_RS08700 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) low > 74
Lysobacter sp. OAE881 0.51 ABIE51_RS07790 CinA family protein 0.19 ABIE51_RS13385 N-acetyl-gamma-glutamyl-phosphate reductase 0.62 34
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS13645 CinA family protein 0.18 LRK53_RS07560 N-acetyl-gamma-glutamyl-phosphate reductase low > 59
Pseudomonas sp. BP01 0.48 JOY50_RS23775 CinA family protein 0.33 JOY50_RS18290 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 84
Ralstonia solanacearum GMI1000 0.47 RS_RS13860 CinA family protein 0.17 RS_RS00700 N-acetyl-gamma-glutamyl-phosphate reductase — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS01580 CinA family protein 0.16 ABZR87_RS05600 N-acetyl-gamma-glutamyl-phosphate reductase low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS07710 CinA family protein 0.17 UW163_RS03490 N-acetyl-gamma-glutamyl-phosphate reductase — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS05915 CinA family protein 0.17 RALBFv3_RS10090 N-acetyl-gamma-glutamyl-phosphate reductase low > 76
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_02870 CinA family protein 0.67 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase low > 62
Ralstonia solanacearum PSI07 0.47 RPSI07_RS11330 CinA family protein 0.17 RPSI07_RS23280 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas orientalis W4I3 0.46 QF045_RS08725 nicotinamide-nucleotide amidohydrolase family protein 0.32 QF045_RS00050 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas sp. S08-1 0.46 OH686_18200 Nicotinamide-nucleotide amidase 0.32 OH686_15195 N-acetyl-gamma-glutamyl-phosphate reductase low > 80
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_06305 nicotinamide-nucleotide amidase 0.15 H281DRAFT_05840 N-acetyl-gamma-glutamyl-phosphate reductase 0.30 44
Pseudomonas putida KT2440 0.46 PP_1628 NMN amidohydrolase 0.33 PP_0432 N-acetyl-gamma-glutamyl-phosphate reductase 1 low > 96
Pseudomonas simiae WCS417 0.46 PS417_05810 damage-inducible protein CinA 0.32 PS417_25660 N-acetyl-gamma-glutamyl-phosphate reductase — —
Paraburkholderia graminis OAS925 0.46 ABIE53_003546 nicotinamide-nucleotide amidase 0.15 ABIE53_000020 N-acetyl-gamma-glutamyl-phosphate reductase low > 113
Pseudomonas aeruginosa PUPa3 0.46 DQ20_RS42240 CinA family protein 0.33 DQ20_RS36110 argC;go_function=N-acetyl-gamma-glutamyl-phosphate N-acetyl-gamma-glutamyl-phosphate reductase low > 101
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_01332 Nicotinamide-nucleotide amidohydrolase PncC 0.31 GEMAOFIL_05252 N-acetyl-gamma-glutamyl-phosphate reductase low > 96
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS05880 CinA family protein 0.31 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas aeruginosa PA14 0.46 IKLFDK_18470 damage-inducible protein CinA 0.33 IKLFDK_22115 N-acetyl-gamma-glutamyl-phosphate reductase low > 98
Pseudomonas aeruginosa MRSN321 0.46 DY961_RS14890 CinA family protein 0.33 DY961_RS23255 argC;go_function=N-acetyl-gamma-glutamyl-phosphate N-acetyl-gamma-glutamyl-phosphate reductase low > 100
Pseudomonas fluorescens SBW25 0.46 PFLU_RS05880 CinA family protein 0.31 PFLU_RS27315 N-acetyl-gamma-glutamyl-phosphate reductase — —
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS16895 competence damage-inducible protein A 0.15 BPHYT_RS18340 n-acetyl-gamma-glutamyl-phosphate reductase low > 109
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS27055 CinA family protein 0.15 QEN71_RS28485 N-acetyl-gamma-glutamyl-phosphate reductase low > 153
Pseudomonas stutzeri RCH2 0.45 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.31 Psest_3639 N-acetyl-gamma-glutamyl-phosphate reductase, common form — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17625 damage-inducible protein CinA 0.15 RR42_RS01210 n-acetyl-gamma-glutamyl-phosphate reductase low > 128
Pseudomonas segetis P6 0.45 ACVTMO_RS16505 CinA family protein 0.32 ACVTMO_RS04475 argC N-acetyl-gamma-glutamyl-phosphate reductase — —
Desulfovibrio vulgaris Hildenborough JW710 0.45 DVU1033 cinA competence/damage-inducible protein CinA protein, truncation (TIGR) 0.29 DVU0492 argC N-acetyl-gamma-glutamyl-phosphate reductase (TIGR) low > 55
Marinobacter adhaerens HP15 0.45 HP15_1046 competence damage-inducible protein A 0.31 HP15_352 N-acetyl-gamma-glutamyl-phosphate reductase low > 73
Pseudomonas sp. SVBP6 0.44 COO64_RS19925 CinA family protein 0.33 COO64_RS22350 argC N-acetyl-gamma-glutamyl-phosphate reductase low > 93
Variovorax sp. SCN45 0.44 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.13 GFF4146 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 127
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_05675 damage-inducible protein CinA 0.32 AO356_14490 N-acetyl-gamma-glutamyl-phosphate reductase low > 104
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.12 GFF2503 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) — —
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.31 PfGW456L13_1233 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 87
Pseudomonas sp. DMC3 0.44 GFF2110 Nicotinamide-nucleotide amidohydrolase PncC 0.31 GFF5 N-acetyl-gamma-glutamyl-phosphate reductase low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1377 CinA, C-terminal 0.31 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.32 Pf6N2E2_4836 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 103
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1377 CinA, C-terminal 0.31 Psyr_4569 N-acetyl-gamma-glutamyl-phosphate reductase — —
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS16840 competence damage-inducible protein A 0.30 HSERO_RS19210 N-acetyl-gamma-glutamyl-phosphate reductase low > 78
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.31 Pf1N1B4_2559 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) — —
Pseudomonas sp. RS175 0.43 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.31 PFR28_04033 N-acetyl-gamma-glutamyl-phosphate reductase low > 88
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_16800 damage-inducible protein CinA 0.31 AO353_07155 N-acetyl-gamma-glutamyl-phosphate reductase low > 101
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_1530 competence/damage-inducible protein CinA C-terminal domain 0.16 B158DRAFT_1979 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 40
Alteromonas macleodii MIT1002 0.42 MIT1002_00954 Nicotinamide-nucleotide amidohydrolase PncC 0.48 MIT1002_00471 N-acetyl-gamma-glutamyl-phosphate reductase low > 70
Methylophilus sp. DMC18 0.41 GFF839 Nicotinamide-nucleotide amidohydrolase PncC 0.31 GFF2784 N-acetyl-gamma-glutamyl-phosphate reductase — —
Magnetospirillum magneticum AMB-1 0.41 AMB_RS12830 CinA family protein 0.31 AMB_RS09075 N-acetyl-gamma-glutamyl-phosphate reductase — —
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS09765 CinA family protein 0.21 HMPREF1078_RS10580 N-acetyl-gamma-glutamyl-phosphate reductase low > 61
Azospirillum brasilense Sp245 0.40 AZOBR_RS14405 competence damage-inducible protein A 0.30 AZOBR_RS07795 N-acetyl-gamma-glutamyl-phosphate reductase — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS16315 CinA family protein 0.20 HMPREF1181_RS03450 N-acetyl-gamma-glutamyl-phosphate reductase — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS10110 CinA family protein 0.31 ABCV34_RS10590 N-acetyl-gamma-glutamyl-phosphate reductase — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.13 Ac3H11_2950 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) low > 79
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS04795 CinA family protein 0.12 A4249_RS05920 N-acetyl-gamma-glutamyl-phosphate reductase low > 48
Azospirillum sp. SherDot2 0.37 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.30 MPMX19_03843 N-acetyl-gamma-glutamyl-phosphate reductase — —
Xanthobacter sp. DMC5 0.37 GFF852 Nicotinamide-nucleotide amidohydrolase PncC 0.28 GFF1325 N-acetyl-gamma-glutamyl-phosphate reductase — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14740 competence/damage-inducible protein CinA C-terminal domain 0.24 PGA1_c17050 N-acetyl-gamma-glutamyl-phosphate reductase ArgC low > 62
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS04115 CinA family protein 0.20 HMPREF1058_RS08840 N-acetyl-gamma-glutamyl-phosphate reductase low > 67
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS17105 CinA family protein 0.20 ABI39_RS02970 N-acetyl-gamma-glutamyl-phosphate reductase low > 72
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_1920 amidohydrolase, PncC family 0.12 Ga0059261_0351 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) low > 68
Dinoroseobacter shibae DFL-12 0.32 Dshi_1579 CinA domain protein (RefSeq) 0.27 Dshi_1759 N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) — —
Bosea sp. OAE506 0.27 ABIE41_RS16805 CinA family protein 0.18 ABIE41_RS15755 N-acetyl-gamma-glutamyl-phosphate reductase low > 77
Bifidobacterium breve UCC2003 0.22 BBR_RS16545 CinA family protein 0.19 BBR_RS13885 N-acetyl-gamma-glutamyl-phosphate reductase low > 34

Not shown: 6 genomes with orthologs for DZA65_RS17455 only; 23 genomes with orthologs for DZA65_RS00935 only