Conservation of cofitness between CSW01_03330 and CSW01_17810 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03330 transcription elongation factor GreA 1.0 CSW01_17810 cobyric acid synthase CobQ 0.59 1
Shewanella sp. ANA-3 0.71 Shewana3_1017 transcription elongation factor GreA (RefSeq) 0.60 Shewana3_3275 cobyric acid synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO1191 greA transcription elongation factor GreA (NCBI ptt file) 0.60 SO1038 cobQ cobyric acid synthase CobQ (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.71 Shew_2837 transcription elongation factor GreA (RefSeq) 0.59 Shew_0717 cobyric acid synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.69 Sama_0951 GreA/GreB family elongation factor (RefSeq) 0.55 Sama_0765 cobyric acid synthase (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2922 Transcription elongation factor GreA 0.43 GFF3966 Cobyric acid synthase (EC 6.3.5.10) low > 78
Klebsiella michiganensis M5al 0.66 BWI76_RS25160 transcription elongation factor GreA 0.43 BWI76_RS23010 cobyric acid synthase CobQ low > 92
Pseudomonas aeruginosa PA14 0.65 IKLFDK_29820 transcription elongation factor GreA 0.62 IKLFDK_06055 cobyric acid synthase low > 101
Pseudomonas stutzeri RCH2 0.61 Psest_0969 transcription elongation factor GreA 0.60 Psest_3008 cobyric acid synthase CobQ low > 67
Pseudomonas sp. RS175 0.59 PFR28_00078 Transcription elongation factor GreA 0.59 PFR28_03204 Cobyric acid synthase — —
Pseudomonas sp. S08-1 0.58 OH686_17085 Transcription elongation factor GreA 0.60 OH686_04965 cobyric acid synthase CobQ low > 80
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_07475 transcription elongation factor GreA 0.58 AO356_19160 cobyric acid synthase — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3363 Transcription elongation factor GreA 0.59 Pf6N2E2_5742 Cobyric acid synthase (EC 6.3.5.10) — —
Pseudomonas sp. BP01 0.57 JOY50_RS26770 greA transcription elongation factor GreA 0.62 JOY50_RS27965 cobyric acid synthase low > 84
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_02941 transcription elongation factor greA 0.44 CCNA_01827 cobyric acid synthase CobQ low > 67
Pseudomonas putida KT2440 0.56 PP_4722 Transcription elongation factor GreA 0.62 PP_1677 Adenosyl-cobyric acid synthase low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4190 transcription elongation factor GreA 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) — —
Caulobacter crescentus NA1000 0.56 CCNA_02941 transcription elongation factor greA 0.44 CCNA_01827 cobyric acid synthase CobQ low > 66
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4190 transcription elongation factor GreA 0.61 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) — —
Pseudomonas simiae WCS417 0.56 PS417_24035 transcription elongation factor GreA 0.59 PS417_20040 cobyric acid synthase — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1171 Transcription elongation factor GreA 0.59 Pf1N1B4_3711 Cobyric acid synthase (EC 6.3.5.10) — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS14135 transcription elongation factor GreA 0.57 ABZR87_RS00040 cobyric acid synthase low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_05625 transcription elongation factor GreA 0.59 AO353_02615 cobyric acid synthase low > 101
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_5098 Transcription elongation factor GreA 0.60 PfGW456L13_4238 Cobyric acid synthase (EC 6.3.5.10) — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS25875 transcription elongation factor GreA 0.58 PFLU_RS22005 cobyric acid synthase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS25875 transcription elongation factor GreA 0.58 PFLU_RS22005 cobyric acid synthase low > 109
Pseudomonas sp. SVBP6 0.55 COO64_RS15235 greA transcription elongation factor GreA 0.60 COO64_RS07225 cobyric acid synthase low > 93
Ralstonia solanacearum PSI07 0.55 RPSI07_RS15260 transcription elongation factor GreA 0.57 RPSI07_RS12925 cobyric acid synthase low > 81
Pseudomonas sp. DMC3 0.55 GFF4978 Transcription elongation factor GreA 0.60 GFF2552 Cobyric acid synthase low > 89
Ralstonia solanacearum UW163 0.55 UW163_RS15495 transcription elongation factor GreA 0.56 UW163_RS09225 cobyric acid synthase — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_3076 transcription elongation factor GreA (RefSeq) 0.36 Dshi_2096 cobyric acid synthase CobQ (RefSeq) — —
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS02185 transcription elongation factor GreA 0.56 RALBFv3_RS04445 cobyric acid synthase low > 76
Ralstonia solanacearum GMI1000 0.54 RS_RS07635 transcription elongation factor GreA 0.57 RS_RS12000 cobyric acid synthase — —
Lysobacter sp. OAE881 0.54 ABIE51_RS11610 transcription elongation factor GreA 0.60 ABIE51_RS04965 cobyric acid synthase low > 62
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS13505 transcription elongation factor GreA 0.57 RR42_RS16075 cobyric acid synthase — —
Methylophilus sp. DMC18 0.53 GFF313 Transcription elongation factor GreA 0.61 GFF1471 Cobyric acid synthase low > 43
Phaeobacter inhibens DSM 17395 0.53 PGA1_c03290 transcription elongation factor GreA 0.39 PGA1_c24000 cobyric acid synthase CobQ — —
Paraburkholderia graminis OAS925 0.53 ABIE53_003003 transcription elongation factor GreA 0.56 ABIE53_001255 adenosylcobyric acid synthase low > 113
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS14185 transcription elongation factor GreA 0.56 BPHYT_RS04900 cobyric acid synthase low > 109
Azospirillum sp. SherDot2 0.52 MPMX19_02300 Transcription elongation factor GreA 0.44 MPMX19_01025 Cobyric acid synthase — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS04785 transcription elongation factor GreA 0.56 QEN71_RS25095 cobyric acid synthase low > 153
Agrobacterium fabrum C58 0.52 Atu2182 transcription elongation facto 0.41 Atu2808 cobyric acid synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_04404 GreA/GreB family elongation factor 0.56 H281DRAFT_00146 adenosylcobyric acid synthase (glutamine-hydrolysing) low > 103
Sinorhizobium meliloti 1021 0.51 SMc01218 transcription elongation factor GreA 0.42 SMc04309 cobyric acid synthase — —
Acidovorax sp. GW101-3H11 0.50 Ac3H11_437 Transcription elongation factor GreA 0.30 Ac3H11_999 Cobyric acid synthase (EC 6.3.5.10) low > 79
Dechlorosoma suillum PS 0.50 Dsui_3063 transcription elongation factor GreA 0.54 Dsui_0542 cobyric acid synthase CobQ low > 51
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4897 Transcription elongation factor GreA 0.31 GFF3998 Cobyric acid synthase (EC 6.3.5.10) low > 90
Bosea sp. OAE506 0.50 ABIE41_RS11905 transcription elongation factor GreA 0.37 ABIE41_RS03845 cobyric acid synthase — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS06930 transcription elongation factor GreA 0.57 HSERO_RS13230 cobyric acid synthase — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_0008 transcription elongation factor GreA 0.38 Ga0059261_0630 adenosylcobyric acid synthase (glutamine-hydrolysing) (EC 6.3.5.10) — —
Azospirillum brasilense Sp245 0.50 AZOBR_RS12900 transcription elongation factor GreA 0.47 AZOBR_RS09845 cobyric acid synthase — —
Rhodospirillum rubrum S1H 0.49 Rru_A2887 GreA/GreB family elongation factor (NCBI) 0.43 Rru_A3381 Cobyric acid synthase CobQ (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.49 TX73_021095 transcription elongation factor GreA 0.41 TX73_010800 cobyric acid synthase — —
Xanthobacter sp. DMC5 0.49 GFF4682 Transcription elongation factor GreA 0.38 GFF372 Cobyric acid synthase — —
Magnetospirillum magneticum AMB-1 0.49 AMB_RS03610 transcription elongation factor GreA 0.41 AMB_RS01485 cobyric acid synthase — —
Variovorax sp. SCN45 0.48 GFF374 Transcription elongation factor GreA 0.32 GFF426 Cobyric acid synthase (EC 6.3.5.10) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS17070 transcription elongation factor GreA 0.31 ABID97_RS17340 cobyric acid synthase low > 91
Desulfovibrio vulgaris Hildenborough JW710 0.46 DVU3245 greA transcription elongation factor GreA (TIGR) 0.37 DVU0816 cobQ cobyric acid synthase CobQ (TIGR) low > 55
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_07290 greA transcription elongation factor GreA 0.57 OKGIIK_05500 cobyric acid synthase low > 52
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS05595 transcription elongation factor GreA 0.58 ABZR86_RS10900 cobyric acid synthase low > 74
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0383 greA transcription elongation factor GreA (RefSeq) 0.35 DvMF_2864 cobyric acid synthase (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS04145 transcription elongation factor GreA 0.37 ABI39_RS15660 cobyric acid synthase low > 72
Phocaeicola vulgatus CL09T03C04 0.35 HMPREF1058_RS12565 transcription elongation factor GreA 0.37 HMPREF1058_RS01395 cobyric acid synthase — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS17725 transcription elongation factor GreA 0.39 HMPREF1078_RS00930 cobyric acid synthase low > 61
Mycobacterium tuberculosis H37Rv 0.24 Rv1080c Probable transcription elongation factor GreA (transcript cleavage factor GreA) 0.35 Rv0255c Probable cobyric acid synthase CobQ1 — —

Not shown: 42 genomes with orthologs for CSW01_03330 only; 6 genomes with orthologs for CSW01_17810 only