Conservation of cofitness between CSW01_12770 and CSW01_13680 in Vibrio cholerae E7946 ATCC 55056

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12770 ABC transporter permease 1.0 CSW01_13680 DNA helicase RecG 0.74 6
Pectobacterium carotovorum WPP14 0.79 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG low > 75
Serratia liquefaciens MT49 0.79 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 IAI46_24905 ATP-dependent DNA helicase RecG low > 87
Dickeya dianthicola ME23 0.78 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG low > 74
Rahnella sp. WP5 0.77 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG low > 89
Enterobacter sp. TBS_079 0.77 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_3248 ABC transport permease subunit 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 76
Pantoea sp. MT58 0.76 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.70 IAI47_00500 ATP-dependent DNA helicase RecG low > 76
Escherichia coli BW25113 0.76 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) low > 76
Escherichia coli ECRC101 0.76 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG low > 87
Escherichia coli ECRC102 0.76 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG low > 74
Erwinia tracheiphila SCR3 0.76 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG low > 73
Escherichia coli BL21 0.76 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein 0.68 ECD_03509 ATP-dependent DNA helicase low > 61
Escherichia coli Nissle 1917 0.76 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.39 32
Escherichia coli ECRC62 0.76 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG low > 75
Escherichia coli ECOR38 0.76 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG low > 88
Escherichia coli ECRC99 0.76 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_13785 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13516_RS17430 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.70 PagCFBP13516_RS00485 recG ATP-dependent DNA helicase RecG 0.72 45
Escherichia coli ECRC98 0.76 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG low > 87
Escherichia coli ECRC100 0.76 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG low > 79
Escherichia coli ECOR27 0.76 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG low > 75
Escherichia fergusonii Becca 0.76 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE 0.68 EFB2_00136 ATP-dependent DNA helicase RecG low > 86
Klebsiella pneumoniae MRSN742743 0.76 GJGHJB_00504 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 GJGHJB_00114 recG ATP-dependent DNA helicase RecG low > 83
Klebsiella pneumoniae MKP103 0.76 KDGMDA_06040 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG low > 94
Klebsiella michiganensis M5al 0.75 BWI76_RS25225 ABC transporter permease 0.68 BWI76_RS27440 DNA helicase RecG low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF2938 Uncharacterized ABC transporter, permease component YrbE 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 78
Erwinia amylovora T8 0.75 OLJFJH_07110 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG low > 58
Alteromonas macleodii MIT1002 0.73 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE 0.64 MIT1002_00111 ATP-dependent DNA helicase RecG low > 70
Shewanella amazonensis SB2B 0.71 Sama_3080 hypothetical protein (RefSeq) 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) low > 62
Shewanella oneidensis MR-1 0.70 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file) 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.69 Shewana3_0679 hypothetical protein (RefSeq) 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) low > 73
Shewanella loihica PV-4 0.68 Shew_3303 hypothetical protein (RefSeq) 0.65 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) low > 60
Marinobacter adhaerens HP15 0.68 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component 0.55 HP15_309 DNA helicase, ATP-dependent, RecG low > 73
Pseudomonas aeruginosa PA14 0.67 IKLFDK_01810 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG low > 98
Pseudomonas aeruginosa MRSN321 0.67 PFGADD_04658 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 PFGADD_05596 recG ATP-dependent DNA helicase RecG low > 99
Pseudomonas aeruginosa PUPa3 0.67 NPBIFN_04717 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 NPBIFN_05672 recG ATP-dependent DNA helicase RecG
Pseudomonas segetis P6 0.67 ACVTMO_RS19085 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.57 ACVTMO_RS00200 recG ATP-dependent DNA helicase RecG low > 75
Pseudomonas sp. S08-1 0.66 OH686_08505 Phospholipid ABC transporter permease protein MlaE 0.56 OH686_13505 ATP-dependent DNA helicase RecG low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_4140 Protein of unknown function DUF140 0.55 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_4140 Protein of unknown function DUF140 0.55 Psyr_0201 ATP-dependent DNA helicase RecG low > 86
Pseudomonas stutzeri RCH2 0.66 Psest_3306 conserved hypothetical integral membrane protein 0.57 Psest_4192 ATP-dependent DNA helicase RecG
Pseudomonas sp. SVBP6 0.66 COO64_RS04320 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG low > 91
Pseudomonas sp. BP01 0.65 JOY50_RS11165 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG low > 84
Pseudomonas fluorescens FW300-N2E2 0.65 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-)
Pseudomonas putida KT2440 0.65 PP_0959 phospholipid ABC transporter 0.56 PP_5310 junction-specific ATP-dependent DNA helicase low > 96
Pseudomonas fluorescens FW300-N2C3 0.65 AO356_07000 ABC transporter permease 0.55 AO356_12380 ATP-dependent DNA helicase RecG low > 104
Pseudomonas sp. DMC3 0.65 GFF1835 Intermembrane phospholipid transport system permease protein MlaE 0.55 GFF427 ATP-dependent DNA helicase RecG low > 89
Pseudomonas sp. RS175 0.64 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE 0.55 PFR28_04435 ATP-dependent DNA helicase RecG low > 88
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-)
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_05145 ABC transporter permease 0.55 AO353_09320 ATP-dependent DNA helicase RecG low > 101
Pseudomonas protegens RBAN4 0.64 FABNJH_04785 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 FABNJH_30625 recG ATP-dependent DNA helicase RecG
Pseudomonas simiae WCS417 0.63 PS417_04380 ABC transporter permease 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.24 21
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_01082 Intermembrane phospholipid transport system permease protein MlaE 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG low > 96
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-)
Pseudomonas orientalis W4I3 0.62 QF045_RS07370 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 QF045_RS02225 ATP-dependent DNA helicase RecG low > 93
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Pseudomonas fluorescens SBW25 0.62 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG low > 109
Acinetobacter radioresistens SK82 0.59 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG low > 36
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS18965 ABC transporter permease 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG low > 128
Acinetobacter baumannii LAC-4 0.56 RR41_RS02035 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG
Ralstonia solanacearum GMI1000 0.56 RS_RS14840 ABC transporter permease 0.45 RS_RS13565 DNA helicase RecG
Paraburkholderia graminis OAS925 0.56 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG low > 113
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.61 42
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG low > 103
Methylophilus sp. DMC18 0.55 GFF1552 Intermembrane phospholipid transport system permease protein MlaE 0.45 GFF2125 ATP-dependent DNA helicase RecG
Ralstonia solanacearum UW163 0.55 UW163_RS06720 ABC transporter permease 0.45 UW163_RS07950 DNA helicase RecG
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS06895 ABC transporter permease 0.45 RALBFv3_RS05675 DNA helicase RecG
Variovorax sp. OAS795 0.55 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG low > 91
Acidovorax sp. GW101-3H11 0.55 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 79
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10340 ABC transporter permease 0.45 RPSI07_RS11625 DNA helicase RecG 0.59 51
Variovorax sp. SCN45 0.54 GFF5335 Phospholipid ABC transporter permease protein MlaE 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.77 55
Dechlorosoma suillum PS 0.53 Dsui_1399 conserved hypothetical integral membrane protein 0.42 Dsui_0311 ATP-dependent DNA helicase RecG low > 51
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS17760 ABC transporter permease 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG low > 109
Castellaniella sp019104865 MT123 0.51 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF1324 Uncharacterized ABC transporter, permease component YrbE 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 90
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG low > 74
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG low > 59
Rhodanobacter sp000427505 FW510-R12 0.50 LRK53_RS16775 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG low > 63
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG low > 53
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS20395 ABC transporter permease 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) low > 74
Lysobacter sp. OAE881 0.39 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG low > 62
Magnetospirillum magneticum AMB-1 0.29 AMB_RS10570 ABC transporter permease 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG
Azospirillum sp. SherDot2 0.29 MPMX19_06141 Intermembrane phospholipid transport system permease protein MlaE 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG
Rhodospirillum rubrum S1H 0.29 Rru_A0408 Protein of unknown function DUF140 (NCBI) 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI)
Azospirillum brasilense Sp245 0.29 AZOBR_RS08345 ABC transporter permease 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG low > 97
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03809 organic solvent resistance transport system permease 0.33 CCNA_01504 ATP-dependent DNA helicase recG low > 67
Caulobacter crescentus NA1000 0.27 CCNA_03809 organic solvent resistance transport system permease 0.33 CCNA_01504 ATP-dependent DNA helicase recG low > 66

Not shown: 2 genomes with orthologs for CSW01_12770 only; 24 genomes with orthologs for CSW01_13680 only