Conservation of cofitness between CSW01_00850 and CSW01_09240 in Vibrio cholerae E7946 ATCC 55056

94 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00850 multidrug resistance protein 1.0 CSW01_09240 Holliday junction branch migration DNA helicase RuvB 0.58 20
Shewanella sp. ANA-3 0.72 Shewana3_0371 acriflavin resistance protein (RefSeq) 0.77 Shewana3_1957 ruvB Holliday junction DNA helicase RuvB (RefSeq) — —
Shewanella amazonensis SB2B 0.71 Sama_3269 putative multidrug resistance protein (RefSeq) 0.76 Sama_1839 ruvB Holliday junction DNA helicase RuvB (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.49 Rru_A3699 Acriflavin resistance protein (NCBI) 0.61 Rru_A1089 Holliday junction DNA helicase RuvB (NCBI) — —
Azospirillum brasilense Sp245 0.49 AZOBR_RS31320 acriflavine resistance protein B 0.59 AZOBR_RS09050 Holliday junction DNA helicase RuvB — —
Magnetospirillum magneticum AMB-1 0.48 AMB_RS17260 acriflavine resistance protein B 0.59 AMB_RS16245 Holliday junction branch migration DNA helicase RuvB — —
Rhodopseudomonas palustris CGA009 0.48 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit 0.60 TX73_005665 Holliday junction branch migration DNA helicase RuvB — —
Pseudomonas segetis P6 0.48 MPMX49_03771 Multidrug efflux pump subunit AcrB 0.74 MPMX49_01685 Holliday junction ATP-dependent DNA helicase RuvB low > 75
Azospirillum sp. SherDot2 0.48 MPMX19_05610 Efflux pump membrane transporter BepE 0.60 MPMX19_00698 Holliday junction ATP-dependent DNA helicase RuvB — —
Pseudomonas simiae WCS417 0.47 PS417_22755 acriflavine resistance protein B 0.75 PS417_22445 ATP-dependent DNA helicase RuvB low > 88
Pseudomonas fluorescens SBW25 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit 0.75 PFLU_RS24085 Holliday junction branch migration DNA helicase RuvB low > 109
Pseudomonas sp. RS175 0.47 PFR28_03330 Multidrug efflux pump subunit AcrB 0.75 PFR28_03412 Holliday junction ATP-dependent DNA helicase RuvB low > 88
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_18440 acriflavine resistance protein B 0.74 AO356_18025 ATP-dependent DNA helicase RuvB low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein 0.74 Pf6N2E2_5537 Holliday junction DNA helicase RuvB — —
Pseudomonas sp. S08-1 0.47 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.75 OH686_19135 Holliday junction DNA helicase RuvB low > 80
Pseudomonas sp. BP01 0.47 JOY50_RS14955 multidrug efflux RND transporter permease subunit 0.73 JOY50_RS01815 ruvB Holliday junction branch migration DNA helicase RuvB low > 84
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein 0.75 Pf1N1B4_637 Holliday junction DNA helicase RuvB — —
Pseudomonas putida KT2440 0.46 PP_0906 putative Multidrug efflux RND transporter 0.73 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB low > 96
Pseudomonas sp. SVBP6 0.46 COO64_RS12055 multidrug efflux RND transporter permease subunit 0.74 COO64_RS20100 ruvB Holliday junction branch migration DNA helicase RuvB low > 93
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_04000 acriflavine resistance protein B 0.75 AO353_03580 ATP-dependent DNA helicase RuvB low > 101
Pseudomonas aeruginosa PUPa3 0.46 DQ20_RS57065 mexW;inference=COORDINATES multidrug efflux RND transporter permease subunit MexW 0.75 DQ20_RS45195 ruvB;go_function=DNA Holliday junction branch migration DNA helicase RuvB low > 101
Pseudomonas aeruginosa PA14 0.46 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW 0.75 IKLFDK_04375 Holliday junction branch migration DNA helicase RuvB — —
Pseudomonas aeruginosa MRSN321 0.46 DY961_RS24615 mexW;inference=COORDINATES multidrug efflux RND transporter permease subunit MexW 0.75 DY961_RS07595 ruvB;go_function=DNA Holliday junction branch migration DNA helicase RuvB low > 100
Pseudomonas sp. DMC3 0.46 GFF5069 Multidrug efflux pump subunit AcrB 0.75 GFF5184 Holliday junction ATP-dependent DNA helicase RuvB low > 89
Marinobacter adhaerens HP15 0.46 HP15_3262 multidrug resistance protein 0.75 HP15_2040 Holliday junction ATP-dependent DNA helicase RuvB — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein 0.75 PfGW456L13_1853 Holliday junction DNA helicase RuvB low > 87
Pseudomonas stutzeri RCH2 0.45 Psest_1153 Cation/multidrug efflux pump 0.74 Psest_1497 Holliday junction DNA helicase, RuvB subunit — —
Variovorax sp. SCN45 0.45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system 0.70 GFF2090 Holliday junction ATP-dependent DNA helicase RuvB (EC 3.6.4.12) low > 127
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS26025 efflux RND transporter permease subunit 0.73 QEN71_RS26800 Holliday junction branch migration DNA helicase RuvB — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS29560 acriflavine resistance protein B 0.72 BPHYT_RS16620 holliday junction ATP-dependent DNA helicase RuvB — —
Xanthobacter sp. DMC5 0.40 GFF2738 Efflux pump membrane transporter BepE 0.60 GFF76 Holliday junction ATP-dependent DNA helicase RuvB — —
Dechlorosoma suillum PS 0.35 Dsui_1555 cation/multidrug efflux pump 0.74 Dsui_0484 Holliday junction DNA helicase, RuvB subunit — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein 0.70 GFF1665 Holliday junction DNA helicase RuvB — —
Acidovorax sp. GW101-3H11 0.34 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein 0.70 Ac3H11_4685 Holliday junction DNA helicase RuvB — —
Desulfovibrio vulgaris Hildenborough JW710 0.25 DVU0061 multidrug resistance protein, putative (TIGR) 0.58 DVU2255 ruvB Holliday junction DNA helicase RuvB (TIGR) low > 55
Acinetobacter baumannii LAC-4 0.25 RR41_RS03865 multidrug efflux RND transporter permease subunit AdeJ 0.69 RR41_RS04685 Holliday junction branch migration DNA helicase RuvB — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 0.56 Synpcc7942_0835 ruvB Holliday junction DNA helicase B — —
Acinetobacter radioresistens SK82 0.24 MPMX26_00689 Multidrug resistance protein MexB 0.68 MPMX26_02186 Holliday junction ATP-dependent DNA helicase RuvB low > 36
Methylophilus sp. DMC18 0.24 GFF1649 Efflux pump membrane transporter BepE 0.74 GFF2327 Holliday junction ATP-dependent DNA helicase RuvB low > 43
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.79 EX28DRAFT_0696 Holliday junction DNA helicase subunit RuvB — —
Klebsiella michiganensis M5al 0.24 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.80 BWI76_RS18145 Holliday junction branch migration DNA helicase RuvB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB 0.79 GFF1639 Holliday junction DNA helicase RuvB — —
Escherichia coli ECRC62 0.24 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD 0.79 BNILDI_15520 ruvB Holliday junction branch migration DNA helicase RuvB low > 75
Escherichia coli BW25113 0.24 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) 0.79 b1860 ruvB Holliday junction DNA helicase B (NCBI) low > 76
Escherichia coli ECOR38 0.24 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD 0.79 HEPCGN_04695 ruvB Holliday junction branch migration DNA helicase RuvB low > 88
Escherichia fergusonii Becca 0.24 EFB2_01418 Multidrug efflux pump subunit AcrB 0.79 EFB2_02082 Holliday junction ATP-dependent DNA helicase RuvB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01261 Multidrug efflux pump subunit AcrB 0.79 OHPLBJKB_01868 Holliday junction ATP-dependent DNA helicase RuvB — —
Escherichia coli BL21 0.24 ECD_02361 aminoglycoside/multidrug efflux system 0.79 ECD_01831 ATP-dependent DNA helicase, component of RuvABC resolvasome — —
Escherichia coli ECRC102 0.24 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD 0.79 NIAGMN_01775 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC99 0.24 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD 0.79 KEDOAH_01820 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC100 0.24 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD 0.79 OKFHMN_26285 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC98 0.24 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD 0.79 JDDGAC_00860 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECRC101 0.24 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD 0.79 MCAODC_19120 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli ECOR27 0.24 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD 0.79 NOLOHH_16730 ruvB Holliday junction branch migration DNA helicase RuvB — —
Escherichia coli Nissle 1917 0.24 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD 0.79 ECOLIN_RS10360 Holliday junction branch migration DNA helicase RuvB — —
Enterobacter sp. TBS_079 0.24 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.80 MPMX20_02766 Holliday junction ATP-dependent DNA helicase RuvB low > 85
Klebsiella pneumoniae MKP103 0.24 KDGMDA_14835 acriflavine resistance protein B 0.80 KDGMDA_25410 Holliday junction branch migration DNA helicase RuvB low > 95
Paraburkholderia graminis OAS925 0.24 ABIE53_005788 multidrug efflux pump 0.72 ABIE53_003495 Holliday junction DNA helicase RuvB low > 113
Pseudomonas orientalis W4I3 0.24 QF045_RS16760 efflux RND transporter permease subunit 0.75 QF045_RS24610 Holliday junction branch migration DNA helicase RuvB 0.74 14
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) 0.59 DvMF_3205 ruvB Holliday junction DNA helicase RuvB (RefSeq) low > 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.75 Psyr_1410 Holliday junction DNA helicase RuvB low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.75 Psyr_1410 Holliday junction DNA helicase RuvB low > 86
Bosea sp. OAE506 0.23 ABIE41_RS01595 efflux RND transporter permease subunit 0.61 ABIE41_RS09480 Holliday junction branch migration DNA helicase RuvB — —
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_11990 acrB acriflavine resistance protein B 0.66 OKGIIK_01850 ruvB Holliday junction branch migration DNA helicase RuvB — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 0.59 CCNA_03344 Holliday junction DNA helicase RuvB — —
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS11745 efflux RND transporter permease subunit 0.67 ABZR86_RS10830 Holliday junction branch migration DNA helicase RuvB low > 74
Caulobacter crescentus NA1000 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 0.59 CCNA_03344 Holliday junction DNA helicase RuvB low > 66
Pseudomonas lactucae CFBP13502 0.23 GEMAOFIL_03223 multidrug efflux RND transporter permease subunit OqxB9 0.75 GEMAOFIL_04641 Holliday junction ATP-dependent DNA helicase RuvB low > 96
Rahnella sp. WP5 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.82 EX31_RS11670 Holliday junction branch migration DNA helicase RuvB — —
Serratia liquefaciens MT49 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD 0.81 IAI46_14620 Holliday junction branch migration DNA helicase RuvB — —
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS23055 multidrug transporter 0.71 HSERO_RS02095 Holliday junction DNA helicase RuvB low > 78
Rhodanobacter denitrificans MT42 0.23 LRK55_RS11630 efflux RND transporter permease subunit 0.67 LRK55_RS04680 Holliday junction branch migration DNA helicase RuvB — —
Cellulophaga baltica 18 0.23 M666_RS00650 efflux RND transporter permease subunit 0.58 M666_RS07660 Holliday junction branch migration DNA helicase RuvB low > 67
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS11905 efflux RND transporter permease subunit 0.67 LRK54_RS04900 Holliday junction branch migration DNA helicase RuvB — —
Pantoea agglomerans CFBP13505 P0401 0.23 PagCFBP13505_RS19855 multidrug efflux RND transporter permease AcrD 0.81 PagCFBP13505_RS02330 Holliday junction branch migration DNA helicase RuvB — —
Paraburkholderia bryophila 376MFSha3.1 0.23 H281DRAFT_04170 multidrug efflux pump 0.72 H281DRAFT_04255 Holliday junction DNA helicase subunit RuvB — —
Pectobacterium carotovorum WPP14 0.23 HER17_RS01560 multidrug efflux RND transporter permease AcrD 0.81 HER17_RS11840 Holliday junction branch migration DNA helicase RuvB low > 75
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.77 B158DRAFT_1136 Holliday junction DNA helicase subunit RuvB low > 40
Pantoea sp. MT58 0.23 IAI47_05310 multidrug efflux RND transporter permease AcrD 0.80 IAI47_08450 Holliday junction branch migration DNA helicase RuvB low > 76
Dickeya dadantii 3937 0.23 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.81 DDA3937_RS10085 Holliday junction branch migration DNA helicase RuvB — —
Erwinia amylovora T8 0.22 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB 0.81 OLJFJH_12860 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS09795 efflux RND transporter permease subunit 0.71 ABZR87_RS07620 Holliday junction branch migration DNA helicase RuvB low > 80
Variovorax sp. OAS795 0.22 ABID97_RS17350 efflux RND transporter permease subunit 0.69 ABID97_RS24875 Holliday junction branch migration DNA helicase RuvB — —
Dickeya dianthicola ME23 0.22 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.81 DZA65_RS10530 Holliday junction branch migration DNA helicase RuvB — —
Dickeya dianthicola 67-19 0.22 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.81 HGI48_RS10115 Holliday junction branch migration DNA helicase RuvB — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS32420 multidrug efflux RND transporter permease subunit 0.73 RR42_RS02700 ATP-dependent DNA helicase RuvB — —
Ralstonia solanacearum GMI1000 0.22 RS_RS00045 multidrug efflux RND transporter permease subunit 0.71 RS_RS02485 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit 0.71 RALBFv3_RS11665 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia solanacearum UW163 0.22 UW163_RS04135 multidrug efflux RND transporter permease subunit 0.71 UW163_RS01920 Holliday junction branch migration DNA helicase RuvB — —
Rhodanobacter sp000427505 FW510-R12 0.22 LRK53_RS07935 multidrug efflux RND transporter permease subunit 0.67 LRK53_RS05130 Holliday junction branch migration DNA helicase RuvB — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter 0.71 RPSI07_RS21555 Holliday junction branch migration DNA helicase RuvB — —
Erwinia tracheiphila SCR3 0.22 LU632_RS18185 efflux RND transporter permease subunit 0.81 LU632_RS13410 ruvB Holliday junction branch migration DNA helicase RuvB — —
Erwinia tracheiphila HP pepo 2.2 0.21 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter 0.81 IJEDHG_22140 ruvB Holliday junction branch migration DNA helicase RuvB — —
Castellaniella sp019104865 MT123 0.20 ABCV34_RS14620 multidrug efflux RND transporter permease subunit 0.71 ABCV34_RS07990 Holliday junction branch migration DNA helicase RuvB — —

Not shown: 0 genomes with orthologs for CSW01_00850 only; 27 genomes with orthologs for CSW01_09240 only