Conservation of cofitness between CSW01_13305 and CSW01_05940 in Vibrio cholerae E7946 ATCC 55056

74 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13305 shikimate kinase 1.0 CSW01_05940 anthranilate phosphoribosyltransferase 0.64 5
Serratia liquefaciens MT49 0.83 IAI46_23705 shikimate kinase AroK 0.60 IAI46_14030 anthranilate phosphoribosyltransferase — —
Erwinia amylovora T8 0.82 OLJFJH_04095 shikimate kinase AroK 0.65 OLJFJH_13485 Anthranilate phosphoribosyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.82 IJEDHG_12030 aroK shikimate kinase AroK 0.61 IJEDHG_23500 Anthranilate phosphoribosyltransferase — —
Pantoea sp. MT58 0.81 IAI47_01890 shikimate kinase AroK 0.63 IAI47_09180 anthranilate phosphoribosyltransferase — —
Rahnella sp. WP5 0.81 EX31_RS04725 shikimate kinase AroK 0.66 EX31_RS09965 anthranilate phosphoribosyltransferase 0.78 49
Shewanella sp. ANA-3 0.79 Shewana3_3894 aroK shikimate kinase I (RefSeq) 0.48 Shewana3_1518 trpD anthranilate phosphoribosyltransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.79 SO0286 aroK shikimate kinase (NCBI ptt file) 0.49 SO3021 trpD anthranilate phosphoribosyltransferase (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.79 Sama_3368 aroK shikimate kinase I (RefSeq) 0.48 Sama_2131 trpD anthranilate phosphoribosyltransferase (RefSeq) — —
Shewanella loihica PV-4 0.78 Shew_0213 shikimate kinase I (RefSeq) 0.50 Shew_2253 anthranilate phosphoribosyltransferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.75 MIT1002_00448 Shikimate kinase 1 0.54 MIT1002_01428 Anthranilate synthase component II — —
Dickeya dianthicola ME23 0.75 DZA65_RS20765 shikimate kinase AroK 0.63 DZA65_RS10955 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.75 HGI48_RS19680 shikimate kinase AroK 0.63 HGI48_RS10475 anthranilate phosphoribosyltransferase — —
Dickeya dadantii 3937 0.75 DDA3937_RS19550 shikimate kinase AroK 0.63 DDA3937_RS10475 anthranilate phosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0763 shikimate kinase (EC 2.7.1.71) 0.46 B158DRAFT_2427 anthranilate phosphoribosyltransferase — —
Pseudomonas segetis P6 0.54 ACVTMO_RS21000 aroK shikimate kinase AroK 0.31 ACVTMO_RS04415 trpD anthranilate phosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.54 Psest_3714 Shikimate kinase 0.33 Psest_3648 anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_0408 shikimate kinase 0.30 Psyr_4580 anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_0408 shikimate kinase 0.30 Psyr_4580 anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_28335 Shikimate kinase 0.28 IKLFDK_22175 Anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa MRSN321 0.52 PFGADD_05278 aroK Shikimate kinase 0.28 PFGADD_00644 trpD Anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa PUPa3 0.52 NPBIFN_05354 aroK Shikimate kinase 0.28 NPBIFN_00647 trpD Anthranilate phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.52 MPMX26_02811 Shikimate kinase 1 0.33 MPMX26_00984 Anthranilate phosphoribosyltransferase — —
Acinetobacter baumannii LAC-4 0.52 RR41_RS01580 shikimate kinase AroK 0.33 RR41_RS05610 anthranilate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.52 COO64_RS13070 aroK shikimate kinase AroK 0.28 COO64_RS22415 trpD anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_09390 shikimate kinase 0.25 AO356_14435 anthranilate phosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.51 HP15_479 shikimate kinase I 0.30 HP15_3290 anthranilate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.51 PS417_01980 shikimate kinase 0.26 PS417_25715 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.51 PFLU_RS02025 shikimate kinase AroK 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas orientalis W4I3 0.51 QF045_RS05045 shikimate kinase AroK 0.26 QF045_RS00110 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12500 shikimate kinase 0.26 AO353_07215 anthranilate phosphoribosyltransferase 0.48 50
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS02025 shikimate kinase AroK 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas sp. BP01 0.51 JOY50_RS09300 aroK shikimate kinase AroK 0.30 JOY50_RS18235 trpD anthranilate phosphoribosyltransferase — —
Pseudomonas putida KT2440 0.50 PP_5079 Shikimate kinase 0.31 PP_0421 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_276 Shikimate kinase I (EC 2.7.1.71) 0.26 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.77 31
Pseudomonas sp. RS175 0.48 PFR28_05012 Shikimate kinase 1 0.26 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3755 Shikimate kinase I (EC 2.7.1.71) 0.26 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_00629 Shikimate kinase 1 0.26 GEMAOFIL_05263 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1538 Shikimate kinase I (EC 2.7.1.71) 0.26 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas sp. DMC3 0.47 GFF3099 Shikimate kinase 1 0.26 GFF17 Anthranilate phosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS12700 shikimate kinase 0.27 ABCV34_RS10305 anthranilate phosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS28040 shikimate kinase 0.33 QEN71_RS27560 anthranilate phosphoribosyltransferase 0.93 11
Paraburkholderia graminis OAS925 0.46 ABIE53_003741 shikimate kinase 0.34 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_05614 shikimate kinase 0.34 H281DRAFT_05713 anthranilate phosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS17890 shikimate kinase 0.33 BPHYT_RS17400 anthranilate phosphoribosyltransferase 0.85 8
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS19010 shikimate kinase 0.35 RR42_RS18305 anthranilate phosphoribosyltransferase 0.58 40
Dechlorosoma suillum PS 0.45 Dsui_1094 shikimate kinase 0.35 Dsui_0169 anthranilate phosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS04305 shikimate kinase 0.31 LRK54_RS11565 anthranilate phosphoribosyltransferase 0.57 19
Rhodanobacter denitrificans MT42 0.45 LRK55_RS04080 shikimate kinase 0.31 LRK55_RS11295 anthranilate phosphoribosyltransferase 0.50 12
Methylophilus sp. DMC18 0.44 GFF2235 Shikimate kinase 1 0.30 GFF2047 Anthranilate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS02595 shikimate kinase 0.32 ABZR87_RS02155 anthranilate phosphoribosyltransferase 0.91 7
Ralstonia solanacearum PSI07 0.42 RPSI07_RS10295 shikimate kinase 0.34 RPSI07_RS02570 anthranilate phosphoribosyltransferase low > 81
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS06940 shikimate kinase 0.33 RALBFv3_RS20295 anthranilate phosphoribosyltransferase low > 76
Ralstonia solanacearum UW163 0.41 UW163_RS06675 shikimate kinase 0.33 UW163_RS18880 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS14885 shikimate kinase 0.34 RS_RS20385 Anthranilate phosphoribosyltransferase 2 low > 80
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.1616.1 Shikimate kinase I (EC 2.7.1.71) 0.30 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.56 11
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1332 Shikimate kinase I (EC 2.7.1.71) 0.33 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.91 13
Variovorax sp. OAS795 0.35 ABID97_RS23260 shikimate kinase 0.34 ABID97_RS05275 anthranilate phosphoribosyltransferase — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS19870 shikimate kinase 0.33 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Rhodopseudomonas palustris CGA009 0.34 TX73_002615 shikimate kinase 0.37 TX73_014980 anthranilate phosphoribosyltransferase — —
Agrobacterium fabrum C58 0.34 Atu3626 shikimate kinase 0.32 Atu1687 anthranilate phosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14090 shikimate kinase AroK 0.36 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Bosea sp. OAE506 0.33 ABIE41_RS06090 shikimate kinase 0.33 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Rhizobium sp. OAE497 0.33 ABIE40_RS17675 shikimate kinase 0.35 ABIE40_RS09545 anthranilate phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_3449 Shikimate kinase I (EC 2.7.1.71) 0.34 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.97 3
Synechocystis sp000284455 PCC 6803 0.32 SGL_RS03075 shikimate kinase 0.33 SGL_RS07485 anthranilate phosphoribosyltransferase — —
Sinorhizobium meliloti 1021 0.32 SMc00695 shikimate kinase 0.35 SMc00235 anthranilate phosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS04170 shikimate kinase 0.36 A4249_RS06170 anthranilate phosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.31 Dshi_1609 Shikimate kinase (RefSeq) 0.35 Dshi_1799 anthranilate phosphoribosyltransferase (RefSeq) — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03103 shikimate kinase 0.36 CCNA_01975 anthranilate phosphoribosyltransferase low > 67
Caulobacter crescentus NA1000 0.30 CCNA_03103 shikimate kinase (EC 2.7.1.71) (from data) 0.36 CCNA_01975 anthranilate phosphoribosyltransferase 0.92 12
Variovorax sp. SCN45 0.30 GFF5324 Shikimate kinase I (EC 2.7.1.71) 0.34 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Rhodospirillum rubrum S1H 0.30 Rru_A3740 Shikimate kinase (NCBI) 0.33 Rru_A1896 Anthranilate phosphoribosyl transferase (NCBI) — —
Desulfovibrio vulgaris Hildenborough JW710 0.28 DVU0892 aroK-1 shikimate kinase (TIGR) 0.28 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) 0.81 1
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_1410 Shikimate kinase (RefSeq) 0.27 DvMF_1744 anthranilate phosphoribosyltransferase (RefSeq) — —

Not shown: 26 genomes with orthologs for CSW01_13305 only; 20 genomes with orthologs for CSW01_05940 only