Conservation of cofitness between CSW01_03860 and CSW01_05940 in Vibrio cholerae E7946 ATCC 55056

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03860 protein translocase subunit SecD 1.0 CSW01_05940 anthranilate phosphoribosyltransferase 0.69 4
Rahnella sp. WP5 0.67 EX31_RS22105 protein translocase subunit SecD 0.66 EX31_RS09965 anthranilate phosphoribosyltransferase — —
Serratia liquefaciens MT49 0.66 IAI46_04850 protein translocase subunit SecD 0.60 IAI46_14030 anthranilate phosphoribosyltransferase — —
Pantoea sp. MT58 0.65 IAI47_14795 protein translocase subunit SecD 0.63 IAI47_09180 anthranilate phosphoribosyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_16280 secD protein translocase subunit SecD 0.61 IJEDHG_23500 Anthranilate phosphoribosyltransferase — —
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS10400 protein translocase subunit SecD 0.66 PagCFBP13505_RS07005 anthranilate phosphoribosyltransferase — —
Dickeya dadantii 3937 0.62 DDA3937_RS05480 protein translocase subunit SecD 0.63 DDA3937_RS10475 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola ME23 0.62 DZA65_RS05865 protein translocase subunit SecD 0.63 DZA65_RS10955 anthranilate phosphoribosyltransferase — —
Dickeya dianthicola 67-19 0.62 HGI48_RS05540 protein translocase subunit SecD 0.63 HGI48_RS10475 anthranilate phosphoribosyltransferase — —
Erwinia amylovora T8 0.61 OLJFJH_18115 protein translocase subunit SecD 0.65 OLJFJH_13485 Anthranilate phosphoribosyltransferase — —
Shewanella amazonensis SB2B 0.61 Sama_2191 secD preprotein translocase subunit SecD (RefSeq) 0.48 Sama_2131 trpD anthranilate phosphoribosyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.60 MIT1002_02811 preprotein translocase subunit SecD 0.54 MIT1002_01428 Anthranilate synthase component II low > 70
Shewanella loihica PV-4 0.60 Shew_2335 secD preprotein translocase subunit SecD (RefSeq) 0.50 Shew_2253 anthranilate phosphoribosyltransferase (RefSeq) — —
Shewanella sp. ANA-3 0.60 Shewana3_1437 secD preprotein translocase subunit SecD (RefSeq) 0.48 Shewana3_1518 trpD anthranilate phosphoribosyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.59 SO3111 secD-2 protein-export membrane protein SecD (NCBI ptt file) 0.49 SO3021 trpD anthranilate phosphoribosyltransferase (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.48 Psest_1244 protein-export membrane protein, SecD/SecF family 0.33 Psest_3648 anthranilate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.47 COO64_RS03860 secD protein translocase subunit SecD 0.28 COO64_RS22415 trpD anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa PUPa3 0.47 DQ20_RS43285 secD;go_component=cell protein translocase subunit SecD 0.28 DQ20_RS36170 trpD;go_function=anthranilate anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa MRSN321 0.47 DY961_RS13815 secD;go_component=cell protein translocase subunit SecD 0.28 DY961_RS23195 trpD;go_function=anthranilate anthranilate phosphoribosyltransferase — —
Pseudomonas aeruginosa PA14 0.47 IKLFDK_19675 Protein translocase subunit SecD 0.28 IKLFDK_22175 Anthranilate phosphoribosyltransferase — —
Pseudomonas sp. BP01 0.46 JOY50_RS22855 secD protein translocase subunit SecD 0.30 JOY50_RS18235 trpD anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_4880 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.26 PfGW456L13_1221 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_3196 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.26 Pf6N2E2_4825 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas putida KT2440 0.46 PP_0835 Sec Translocation Complex SecD subunit 0.31 PP_0421 Anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.30 Psyr_4580 anthranilate phosphoribosyltransferase — —
Marinobacter adhaerens HP15 0.46 HP15_1481 preprotein translocase subunit SecD 0.30 HP15_3290 anthranilate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1230 SecD/SecF/SecDF export membrane protein:SecD export membrane protein 0.30 Psyr_4580 anthranilate phosphoribosyltransferase — —
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04799 Protein translocase subunit SecD 0.26 GEMAOFIL_05263 Anthranilate phosphoribosyltransferase — —
Pseudomonas orientalis W4I3 0.45 QF045_RS25455 protein translocase subunit SecD 0.26 QF045_RS00110 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS24890 protein translocase subunit SecD 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.45 PS417_23235 preprotein translocase subunit SecD 0.26 PS417_25715 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS24890 protein translocase subunit SecD 0.26 PFLU_RS27370 anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_3008 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.26 Pf1N1B4_2548 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Pseudomonas segetis P6 0.45 MPMX49_01500 Protein translocase subunit SecD 0.31 MPMX49_00891 Anthranilate phosphoribosyltransferase — —
Pseudomonas sp. RS175 0.45 PFR28_00279 Protein translocase subunit SecD 0.26 PFR28_04044 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_06680 preprotein translocase subunit SecD 0.25 AO356_14435 anthranilate phosphoribosyltransferase — —
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2518 protein-export membrane protein, SecD/SecF family 0.46 B158DRAFT_2427 anthranilate phosphoribosyltransferase — —
Acinetobacter radioresistens SK82 0.45 MPMX26_00436 Protein translocase subunit SecD 0.33 MPMX26_00984 Anthranilate phosphoribosyltransferase — —
Pseudomonas sp. DMC3 0.44 GFF4357 Protein translocase subunit SecD 0.26 GFF17 Anthranilate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_15800 preprotein translocase subunit SecD 0.26 AO353_07215 anthranilate phosphoribosyltransferase — —
Dechlorosoma suillum PS 0.44 Dsui_3325 protein-export membrane protein, SecD/SecF family 0.35 Dsui_0169 anthranilate phosphoribosyltransferase — —
Acinetobacter baumannii LAC-4 0.43 RR41_RS02915 protein translocase subunit SecD 0.33 RR41_RS05610 anthranilate phosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS26650 protein translocase subunit SecD 0.33 QEN71_RS27560 anthranilate phosphoribosyltransferase — —
Variovorax sp. SCN45 0.43 GFF5485 Protein translocase subunit SecD 0.34 GFF5891 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Ralstonia solanacearum UW163 0.43 UW163_RS07930 protein translocase subunit SecD 0.33 UW163_RS18880 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS05695 protein translocase subunit SecD 0.33 RALBFv3_RS20295 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.43 RPSI07_RS11605 protein translocase subunit SecD 0.34 RPSI07_RS02570 anthranilate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.42 RS_RS13585 protein translocase subunit SecD 0.34 RS_RS20385 Anthranilate phosphoribosyltransferase 2 — —
Methylophilus sp. DMC18 0.42 GFF1742 Protein translocase subunit SecD 0.30 GFF2047 Anthranilate phosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04668 preprotein translocase subunit SecD 0.34 H281DRAFT_05713 anthranilate phosphoribosyltransferase — —
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03420 preprotein translocase subunit SecD 0.33 BPHYT_RS17400 anthranilate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS01290 protein translocase subunit SecD 0.32 ABZR87_RS02155 anthranilate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.41 ABID97_RS01850 protein translocase subunit SecD 0.34 ABID97_RS05275 anthranilate phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_4414 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.34 Ac3H11_771 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09530 protein translocase subunit SecD 0.31 ABZR86_RS12070 anthranilate phosphoribosyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.2170.1 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.30 Xcc-8004.621.1 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS17410 preprotein translocase subunit SecD 0.35 RR42_RS18305 anthranilate phosphoribosyltransferase — —
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS06220 preprotein translocase subunit SecD 0.28 HSERO_RS19445 anthranilate phosphoribosyltransferase — —
Lysobacter sp. OAE881 0.39 ABIE51_RS15010 protein translocase subunit SecD 0.30 ABIE51_RS04180 anthranilate phosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15355 protein translocase subunit SecD 0.27 ABCV34_RS10305 anthranilate phosphoribosyltransferase — —
Paraburkholderia graminis OAS925 0.39 ABIE53_000829 preprotein translocase subunit SecD 0.34 ABIE53_003642 anthranilate phosphoribosyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF2568 Protein-export membrane protein SecD (TC 3.A.5.1.1) 0.33 GFF3110 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) — —
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS03120 protein translocase subunit SecD 0.31 LRK54_RS11565 anthranilate phosphoribosyltransferase — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS02870 protein translocase subunit SecD 0.31 LRK55_RS11295 anthranilate phosphoribosyltransferase — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0541 secD preprotein translocase subunit SecD (RefSeq) 0.27 DvMF_1744 anthranilate phosphoribosyltransferase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.28 TX73_014660 protein translocase subunit SecD 0.37 TX73_014980 anthranilate phosphoribosyltransferase — —
Xanthobacter sp. DMC5 0.27 GFF561 Protein translocase subunit SecD 0.35 GFF953 Anthranilate phosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.26 PGA1_c18920 protein-export membrane protein SecD 0.36 PGA1_c16890 anthranilate phosphoribosyltransferase TrpD — —
Magnetospirillum magneticum AMB-1 0.26 AMB_RS12645 protein translocase subunit SecD 0.33 AMB_RS14410 anthranilate phosphoribosyltransferase — —
Desulfovibrio vulgaris Hildenborough JW710 0.26 DVU1819 secD protein-export membrane protein SecD (TIGR) 0.28 DVU0467 trpD anthranilate phosphoribosyltransferase (TIGR) — —
Azospirillum sp. SherDot2 0.25 MPMX19_01164 Protein translocase subunit SecD 0.36 MPMX19_01015 Anthranilate phosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.24 CCNA_02070 protein translocase subunit secD 0.36 CCNA_01975 anthranilate phosphoribosyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_02070 protein translocase subunit secD 0.36 CCNA_01975 anthranilate phosphoribosyltransferase — —
Bosea sp. OAE506 0.23 ABIE41_RS15040 protein translocase subunit SecD 0.33 ABIE41_RS17420 anthranilate phosphoribosyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3559 protein-export membrane protein, SecD/SecF family 0.24 Ga0059261_0929 anthranilate phosphoribosyltransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS04665 protein translocase subunit SecD 0.36 A4249_RS06170 anthranilate phosphoribosyltransferase — —

Not shown: 23 genomes with orthologs for CSW01_03860 only; 23 genomes with orthologs for CSW01_05940 only