Conservation of cofitness between CSW01_12830 and CSW01_03815 in Vibrio cholerae E7946 ATCC 55056

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12830 RNase adaptor protein RapZ 1.0 CSW01_03815 peroxidase 0.59 20
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS09365 RNase adapter RapZ 0.30 PagCFBP13505_RS00890 alkyl hydroperoxide reductase subunit C low > 74
Pectobacterium carotovorum WPP14 0.60 HER17_RS20075 RNase adapter RapZ 0.74 HER17_RS16005 peroxiredoxin C low > 75
Dickeya dadantii 3937 0.60 DDA3937_RS01515 RNase adapter RapZ 0.76 DDA3937_RS05455 peroxiredoxin C — —
Dickeya dianthicola ME23 0.60 DZA65_RS01495 RNase adapter RapZ 0.76 DZA65_RS05840 peroxiredoxin C low > 75
Pantoea sp. MT58 0.60 IAI47_17200 RNase adapter RapZ 0.30 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Dickeya dianthicola 67-19 0.60 HGI48_RS01430 RNase adapter RapZ 0.76 HGI48_RS05515 peroxiredoxin C — —
Erwinia tracheiphila SCR3 0.60 LU632_RS21295 rapZ RNase adapter RapZ 0.77 LU632_RS18475 peroxiredoxin C low > 74
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3259 Predicted P-loop-containing kinase 0.76 EX28DRAFT_2568 Peroxiredoxin low > 76
Klebsiella michiganensis M5al 0.60 BWI76_RS25280 RNase adaptor protein RapZ 0.75 BWI76_RS06285 peroxiredoxin low > 92
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_13725 rapZ RNase adapter RapZ 0.77 IJEDHG_16310 ahpC peroxiredoxin low > 61
Rahnella sp. WP5 0.60 EX31_RS12385 RNase adapter RapZ 0.77 EX31_RS22080 peroxiredoxin C low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2949 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.75 GFF4302 Alkyl hydroperoxide reductase subunit C-like protein low > 78
Klebsiella pneumoniae MKP103 0.60 KDGMDA_06095 RNase adapter RapZ 0.75 KDGMDA_14380 peroxiredoxin low > 95
Enterobacter sp. TBS_079 0.60 MPMX20_04111 RNase adapter protein RapZ 0.76 MPMX20_00994 Alkyl hydroperoxide reductase C low > 85
Serratia liquefaciens MT49 0.60 IAI46_22485 RNase adapter RapZ 0.76 IAI46_04825 peroxiredoxin C low > 86
Escherichia coli ECRC101 0.60 MCAODC_08445 rapZ RNase adapter RapZ 0.29 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C low > 88
Escherichia coli ECRC98 0.60 JDDGAC_21550 rapZ RNase adapter RapZ 0.29 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C low > 87
Escherichia coli Nissle 1917 0.60 ECOLIN_RS18440 RNase adapter RapZ 0.29 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C low > 55
Escherichia coli BW25113 0.60 b3205 yhbJ hypothetical protein (NCBI) 0.29 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Escherichia coli ECOR27 0.60 NOLOHH_09725 rapZ RNase adapter RapZ 0.29 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 76
Escherichia coli ECRC100 0.60 OKFHMN_17925 rapZ RNase adapter RapZ 0.29 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C low > 79
Escherichia fergusonii Becca 0.60 EFB2_00618 RNase adapter protein RapZ 0.29 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli ECRC62 0.60 BNILDI_01810 rapZ RNase adapter RapZ 0.29 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C low > 75
Escherichia coli ECRC102 0.60 NIAGMN_15685 rapZ RNase adapter RapZ 0.29 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C low > 80
Escherichia coli ECOR38 0.60 HEPCGN_16800 rapZ RNase adapter RapZ 0.29 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C low > 88
Escherichia coli BL21 0.60 ECD_03070 adaptor protein for GlmZ/GlmY sRNA decay, glucosamine-6-phosphate-regulated; NTPase 0.29 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 61
Escherichia coli ECRC99 0.60 KEDOAH_10225 rapZ RNase adapter RapZ 0.29 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00495 RNase adapter protein RapZ 0.29 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 74
Erwinia amylovora T8 0.59 OLJFJH_07055 RNase adapter RapZ 0.75 OLJFJH_18155 peroxiredoxin low > 58
Alteromonas macleodii MIT1002 0.57 MIT1002_00824 glmZ(sRNA)-inactivating NTPase 0.81 MIT1002_01241 putative peroxiredoxin low > 70
Shewanella amazonensis SB2B 0.57 Sama_3091 hypothetical protein (RefSeq) 0.83 Sama_2094 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen (RefSeq) low > 62
Shewanella sp. ANA-3 0.56 Shewana3_0669 hypothetical protein (RefSeq) 0.81 Shewana3_2541 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq) low > 73
Shewanella loihica PV-4 0.55 Shew_3314 hypothetical protein (RefSeq) 0.80 Shew_1516 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq) — —
Marinobacter adhaerens HP15 0.49 HP15_2445 protein yhbJ 0.29 HP15_3622 peroxiredoxin low > 73
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3270 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.71 Pf6N2E2_5586 Alkyl hydroperoxide reductase subunit C-like protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_07050 glmZ(sRNA)-inactivating NTPase 0.70 AO356_18305 alkyl hydroperoxide reductase low > 104
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1083 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.70 Pf1N1B4_746 Alkyl hydroperoxide reductase subunit C-like protein — —
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_05195 glmZ(sRNA)-inactivating NTPase 0.69 AO353_04125 alkyl hydroperoxide reductase low > 101
Pseudomonas sp. DMC3 0.47 GFF1825 RNase adapter protein RapZ 0.71 GFF5096 Alkyl hydroperoxide reductase C low > 89
Pseudomonas sp. S08-1 0.47 OH686_08560 RNase adapter protein RapZ 0.29 OH686_18680 peroxiredoxin low > 80
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_5017 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.70 PfGW456L13_1745 Alkyl hydroperoxide reductase subunit C-like protein low > 87
Pseudomonas lactucae CFBP13502 0.47 GEMAOFIL_01072 RNase adapter protein RapZ 0.69 GEMAOFIL_01311 Alkyl hydroperoxide reductase C low > 93
Pseudomonas sp. SVBP6 0.47 COO64_RS04270 rapZ RNase adapter RapZ 0.70 COO64_RS16850 peroxiredoxin low > 93
Pseudomonas sp. RS175 0.47 PFR28_00170 RNase adapter protein RapZ 0.69 PFR28_03357 Alkyl hydroperoxide reductase C low > 88
Pseudomonas aeruginosa PA14 0.46 IKLFDK_01755 RNase adapter RapZ 0.70 IKLFDK_18015 alkyl hydroperoxide reductase low > 100
Pseudomonas segetis P6 0.46 MPMX49_03861 RNase adapter protein RapZ 0.70 MPMX49_01443 Alkyl hydroperoxide reductase C low > 75
Pseudomonas fluorescens SBW25 0.46 PFLU_RS04385 RNase adapter RapZ 0.69 PFLU_RS05705 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS04385 RNase adapter RapZ 0.69 PFLU_RS05705 peroxiredoxin low > 109
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_2077 Predicted P-loop-containing kinase 0.80 B158DRAFT_1235 Peroxiredoxin low > 40
Pseudomonas putida KT2440 0.46 PP_0949 putative ATP-binding protein UPF0042 0.74 PP_1084 putative peroxiredoxin low > 96
Pseudomonas simiae WCS417 0.46 PS417_04330 glmZ(sRNA)-inactivating NTPase 0.69 PS417_05620 alkyl hydroperoxide reductase — —
Pseudomonas sp. BP01 0.45 JOY50_RS11115 rapZ RNase adapter RapZ 0.74 JOY50_RS14915 peroxiredoxin low > 84
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF828 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.30 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 90
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 0.34 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_4150 Uncharacterized P-loop ATPase protein UPF0042 0.34 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS19535 nucleotide-binding protein 0.33 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Methylophilus sp. DMC18 0.44 GFF2266 RNase adapter protein RapZ 0.28 GFF2285 Alkyl hydroperoxide reductase C low > 43
Pseudomonas stutzeri RCH2 0.44 Psest_3316 Predicted P-loop-containing kinase 0.29 Psest_1133 peroxiredoxin — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_3459 Hypothetical ATP-binding protein UPF0042, contains P-loop 0.28 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) — —
Lysobacter sp. OAE881 0.44 ABIE51_RS15975 RNase adapter RapZ 0.33 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C low > 62
Ralstonia solanacearum GMI1000 0.43 RS_RS01995 RNase adaptor protein RapZ 0.29 RS_RS18335 peroxiredoxin low > 80
Variovorax sp. SCN45 0.43 GFF2356 RNase adapter protein RapZ 0.29 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Ralstonia solanacearum PSI07 0.43 RPSI07_RS22155 RNase adapter RapZ 0.29 RPSI07_RS00930 peroxiredoxin low > 81
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS07035 RNase adapter RapZ 0.29 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C 0.55 35
Ralstonia solanacearum UW163 0.43 UW163_RS02435 RNase adapter RapZ 0.28 UW163_RS22815 peroxiredoxin — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS11145 RNase adapter RapZ 0.28 RALBFv3_RS22270 peroxiredoxin low > 76
Variovorax sp. OAS795 0.42 ABID97_RS23710 RNase adapter RapZ 0.29 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS19800 RNase adapter RapZ 0.33 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C low > 74
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_01931 UPF0042 nucleotide-binding protein 0.32 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.1658.1 hypothetical protein 0.28 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 74
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_02250 rapZ RNase adapter RapZ 0.31 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C low > 52
Acinetobacter radioresistens SK82 0.41 MPMX26_00547 RNase adapter protein RapZ 0.31 MPMX26_02009 Alkyl hydroperoxide reductase C low > 36
Acinetobacter baumannii LAC-4 0.41 RR41_RS16040 RNase adapter RapZ 0.33 RR41_RS10170 peroxiredoxin — —
Paraburkholderia graminis OAS925 0.41 ABIE53_000714 UPF0042 nucleotide-binding protein 0.33 ABIE53_005904 peroxiredoxin low > 113
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS02060 nucleotide-binding protein 0.25 RR42_RS32715 peroxidase low > 128
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14330 RNase adapter RapZ 0.31 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Dechlorosoma suillum PS 0.40 Dsui_0990 putative P-loop-containing kinase 0.69 Dsui_1253 peroxiredoxin low > 51
Rhodospirillum rubrum S1H 0.39 Rru_A3448 Uncharacterized P-loop ATPase protein UPF0042 (NCBI) 0.57 Rru_A2897 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) low > 58
Azospirillum brasilense Sp245 0.39 AZOBR_RS30485 nucleotide-binding protein 0.31 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C low > 97
Azospirillum sp. SherDot2 0.38 MPMX19_02622 Nucleotide-binding protein 0.30 MPMX19_05835 Alkyl hydroperoxide reductase C low > 112
Magnetospirillum magneticum AMB-1 0.37 AMB_RS22235 RNase adaptor protein RapZ 0.56 AMB_RS03415 peroxiredoxin — —
Phaeobacter inhibens DSM 17395 0.35 PGA1_c01180 Predicted P-loop-containing kinase 0.19 PGA1_c33020 peroxiredoxin low > 62
Desulfovibrio vulgaris Miyazaki F 0.35 DvMF_0424 hypothetical protein (RefSeq) 0.27 DvMF_0219 Peroxiredoxin (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.33 DVU1631 conserved hypothetical protein (TIGR) 0.68 DVU2247 ahpC alkyl hydroperoxide reductase C (Dmitry Rodionov) low > 55
Bifidobacterium breve UCC2003 0.33 BBR_RS15525 RNase adapter RapZ 0.28 BBR_RS10460 peroxiredoxin low > 34
Fusobacterium nucleatum SB010 0.32 HUW76_06700 RNase adapter RapZ 0.33 HUW76_10130 peroxiredoxin low > 35
Sphingobium sp. HT1-2 0.32 GFF3820 RNase adapter protein RapZ 0.31 GFF184 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 95
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_0917 Predicted P-loop-containing kinase 0.32 Ga0059261_0155 peroxiredoxin low > 68

Not shown: 8 genomes with orthologs for CSW01_12830 only; 18 genomes with orthologs for CSW01_03815 only