Conservation of cofitness between CSW01_13390 and CSW01_01035 in Vibrio cholerae E7946 ATCC 55056

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13390 phosphoenolpyruvate carboxylase 1.0 CSW01_01035 gamma-glutamyltransferase 0.43 20
Dickeya dianthicola 67-19 0.66 HGI48_RS00850 phosphoenolpyruvate carboxylase 0.23 HGI48_RS14025 gamma-glutamyltransferase low > 71
Dickeya dadantii 3937 0.66 DDA3937_RS20360 phosphoenolpyruvate carboxylase 0.23 DDA3937_RS14030 gamma-glutamyltransferase low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS20655 phosphoenolpyruvate carboxylase 0.22 HER17_RS00330 gamma-glutamyltransferase low > 75
Dickeya dianthicola ME23 0.65 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.23 DZA65_RS14700 gamma-glutamyltransferase low > 75
Serratia liquefaciens MT49 0.65 IAI46_24525 phosphoenolpyruvate carboxylase 0.23 IAI46_04820 gamma-glutamyltransferase low > 87
Klebsiella pneumoniae MKP103 0.64 KDGMDA_09355 phosphoenolpyruvate carboxylase 0.25 KDGMDA_07150 gamma-glutamyltransferase low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.26 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 78
Klebsiella michiganensis M5al 0.64 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.26 BWI76_RS26275 gamma-glutamyltransferase low > 92
Pantoea sp. MT58 0.64 IAI47_00895 phosphoenolpyruvate carboxylase 0.25 IAI47_01620 gamma-glutamyltransferase low > 76
Escherichia coli ECRC101 0.64 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.25 MCAODC_07330 ggt gamma-glutamyltransferase low > 87
Escherichia coli ECRC100 0.64 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.26 OKFHMN_16800 ggt gamma-glutamyltransferase low > 79
Escherichia coli ECRC99 0.64 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase 0.26 KEDOAH_11340 ggt gamma-glutamyltransferase — —
Escherichia coli ECRC98 0.64 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase 0.26 JDDGAC_20430 ggt gamma-glutamyltransferase low > 87
Escherichia coli ECRC102 0.64 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase 0.26 NIAGMN_14570 ggt gamma-glutamyltransferase low > 80
Enterobacter asburiae PDN3 0.63 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.26 EX28DRAFT_4279 gamma-glutamyltranspeptidase low > 76
Escherichia coli BW25113 0.63 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.26 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) low > 76
Escherichia coli Nissle 1917 0.63 ECOLIN_RS22835 phosphoenolpyruvate carboxylase 0.26 ECOLIN_RS19715 gamma-glutamyltransferase low > 55
Escherichia coli ECOR38 0.63 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase 0.26 HEPCGN_15620 ggt gamma-glutamyltransferase low > 88
Escherichia coli BL21 0.63 ECD_03841 phosphoenolpyruvate carboxylase 0.26 ECD_03296 gamma-glutamyltranspeptidase low > 61
Escherichia fergusonii Becca 0.63 EFB2_04658 Phosphoenolpyruvate carboxylase 0.26 EFB2_00375 Glutathione hydrolase proenzyme low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase 0.26 OHPLBJKB_00256 Glutathione hydrolase proenzyme low > 74
Escherichia coli ECRC62 0.63 BNILDI_05785 ppc phosphoenolpyruvate carboxylase 0.26 BNILDI_02915 ggt gamma-glutamyltransferase low > 75
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13505_RS18445 phosphoenolpyruvate carboxylase 0.25 PagCFBP13505_RS18135 gamma-glutamyltransferase low > 74
Escherichia coli ECOR27 0.63 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.26 NOLOHH_08590 ggt gamma-glutamyltransferase low > 76
Enterobacter sp. TBS_079 0.63 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.25 MPMX20_04323 Glutathione hydrolase proenzyme low > 85
Rahnella sp. WP5 0.63 EX31_RS14200 phosphoenolpyruvate carboxylase 0.23 EX31_RS22075 gamma-glutamyltransferase low > 89
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_13035 ppc phosphoenolpyruvate carboxylase 0.24 IJEDHG_08020 ggt gamma-glutamyltransferase low > 61
Erwinia tracheiphila SCR3 0.62 LU632_RS19625 ppc phosphoenolpyruvate carboxylase 0.24 LU632_RS19180 ggt gamma-glutamyltransferase low > 73
Erwinia amylovora T8 0.62 OLJFJH_06110 Phosphoenolpyruvate carboxylase 0.25 OLJFJH_04300 gamma-glutamyltransferase low > 58
Shewanella oneidensis MR-1 0.56 SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) 0.26 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_3906 phosphoenolpyruvate carboxylase (RefSeq) 0.25 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_0254 phosphoenolpyruvate carboxylase (RefSeq) 0.25 Sama_1566 gamma-glutamyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_0200 phosphoenolpyruvate carboxylase (RefSeq) 0.27 Shew_2158 gamma-glutamyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.51 MIT1002_03491 Phosphoenolpyruvate carboxylase 0.42 MIT1002_02259 Gamma-glutamyltranspeptidase precursor low > 70
Pseudomonas sp. RS175 0.50 PFR28_00368 Phosphoenolpyruvate carboxylase 0.40 PFR28_03672 Glutathione hydrolase proenzyme low > 88
Marinobacter adhaerens HP15 0.49 HP15_795 phosphoenolpyruvate carboxylase 0.25 HP15_1357 gamma-glutamyltranspeptidase periplasmic precursor low > 73
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS14540 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase 0.22 DY961_RS19040 ggt;go_process=glutathione gamma-glutamyltransferase low > 100
Pseudomonas aeruginosa PA14 0.49 IKLFDK_18825 phosphoenolpyruvate carboxylase 0.22 IKLFDK_06365 gamma-glutamyltransferase low > 98
Pseudomonas aeruginosa PUPa3 0.49 DQ20_RS42585 ppc;go_function=phosphoenolpyruvate phosphoenolpyruvate carboxylase 0.22 DQ20_RS53165 ggt;go_process=glutathione gamma-glutamyltransferase low > 101
Pseudomonas orientalis W4I3 0.49 QF045_RS08910 phosphoenolpyruvate carboxylase 0.38 QF045_RS06425 gamma-glutamyltransferase low > 93
Pseudomonas stutzeri RCH2 0.49 Psest_1557 Phosphoenolpyruvate carboxylase 0.21 Psest_1413 gamma-glutamyltranspeptidase low > 67
Pseudomonas fluorescens SBW25 0.49 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.37 PFLU_RS03510 gamma-glutamyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.37 PFLU_RS03510 gamma-glutamyltransferase low > 109
Pseudomonas sp. SVBP6 0.49 COO64_RS19495 ppc phosphoenolpyruvate carboxylase 0.22 COO64_RS02790 ggt gamma-glutamyltransferase low > 93
Pseudomonas fluorescens FW300-N1B4 0.49 Pf1N1B4_3051 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.39 Pf1N1B4_2898 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 87
Pseudomonas simiae WCS417 0.49 PS417_06060 phosphoenolpyruvate carboxylase 0.38 PS417_03410 gamma-glutamyltransferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_16310 phosphoenolpyruvate carboxylase 0.38 AO353_14670 gamma-glutamyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_06185 phosphoenolpyruvate carboxylase 0.38 AO356_16305 gamma-glutamyltransferase low > 104
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_01382 Phosphoenolpyruvate carboxylase 0.37 GEMAOFIL_00899 Glutathione hydrolase proenzyme low > 96
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.39 PfGW456L13_1563 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 87
Pseudomonas sp. DMC3 0.48 GFF2023 Phosphoenolpyruvate carboxylase 0.39 GFF4505 Glutathione hydrolase proenzyme low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_1318 Phosphoenolpyruvate carboxylase 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_1318 Phosphoenolpyruvate carboxylase 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 low > 86
Pseudomonas putida KT2440 0.48 PP_1505 Phosphoenolpyruvate carboxylase 0.39 PP_3535 putative gamma-glutamyltransferase low > 96
Pseudomonas sp. S08-1 0.48 OH686_06795 Phosphoenolpyruvate carboxylase 0.12 OH686_14140 gamma-glutamyltransferase low > 80
Pseudomonas sp. BP01 0.47 JOY50_RS26030 ppc phosphoenolpyruvate carboxylase 0.39 JOY50_RS27455 ggt gamma-glutamyltransferase low > 84
Acinetobacter baumannii LAC-4 0.46 RR41_RS00155 phosphoenolpyruvate carboxylase 0.31 RR41_RS14735 gamma-glutamyltransferase low > 55
Azospirillum sp. SherDot2 0.25 MPMX19_06050 Phosphoenolpyruvate carboxylase 0.28 MPMX19_05752 Glutathione hydrolase proenzyme low > 112
Rhodopseudomonas palustris CGA009 0.25 TX73_009115 phosphoenolpyruvate carboxylase 0.24 TX73_000130 gamma-glutamyltransferase low > 86
Xanthobacter sp. DMC5 0.24 GFF2267 Phosphoenolpyruvate carboxylase 0.16 GFF3143 Glutathione hydrolase-like YwrD proenzyme — —
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS16140 phosphoenolpyruvate carboxylase 0.23 ABZR87_RS19795 gamma-glutamyltransferase low > 80
Ralstonia solanacearum GMI1000 0.23 RS_RS11840 phosphoenolpyruvate carboxylase 0.36 RS_RS14630 gamma-glutamyltransferase family protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.37 GFF3824 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 90
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4314.1 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.19 Xcc-8004.2158.1 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 74
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS14670 phosphoenolpyruvate carboxylase 0.28 HSERO_RS05455 gamma-glutamyltranspeptidase low > 78
Ralstonia solanacearum PSI07 0.23 RPSI07_RS13100 phosphoenolpyruvate carboxylase 0.39 RPSI07_RS10545 gamma-glutamyltransferase family protein low > 81
Acidovorax sp. GW101-3H11 0.23 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.42 Ac3H11_4929 Gamma-glutamyltranspeptidase (EC 2.3.2.2) low > 79
Ralstonia solanacearum UW163 0.23 UW163_RS09420 phosphoenolpyruvate carboxylase 0.38 UW163_RS06945 gamma-glutamyltransferase family protein — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS04250 phosphoenolpyruvate carboxylase 0.38 RALBFv3_RS06680 gamma-glutamyltransferase family protein low > 76
Rhodanobacter sp. FW510-T8 0.22 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase 0.19 OKGIIK_02600 ggt gamma-glutamyltransferase low > 53
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 0.21 H281DRAFT_01608 gamma-glutamyltransferase 1 Threonine peptidase. MEROPS family T03 low > 103
Paraburkholderia graminis OAS925 0.22 ABIE53_001314 phosphoenolpyruvate carboxylase 0.21 ABIE53_004289 gamma-glutamyltranspeptidase/glutathione hydrolase low > 113
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS05225 phosphoenolpyruvate carboxylase 0.22 BPHYT_RS21360 gamma-glutamyltranspeptidase low > 109
Synechocystis sp000284455 PCC 6803 0.22 SGL_RS11290 phosphoenolpyruvate carboxylase 0.14 SGL_RS10660 gamma-glutamyltransferase — —
Variovorax sp. SCN45 0.22 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.24 GFF3077 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) low > 127
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2719 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.32 Ga0059261_3349 Gamma-glutamyltransferase low > 68
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS15905 phosphoenolpyruvate carboxylase 0.40 RR42_RS26175 gamma-glutamyltransferase low > 128
Variovorax sp. OAS795 0.22 ABID97_RS08220 phosphoenolpyruvate carboxylase 0.24 ABID97_RS09895 gamma-glutamyltransferase low > 91
Dyella japonica UNC79MFTsu3.2 0.21 ABZR86_RS11555 phosphoenolpyruvate carboxylase 0.19 ABZR86_RS20010 gamma-glutamyltransferase low > 74
Lysobacter sp. OAE881 0.21 ABIE51_RS18965 phosphoenolpyruvate carboxylase 0.20 ABIE51_RS15105 gamma-glutamyltransferase low > 62
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS24955 phosphoenolpyruvate carboxylase 0.21 QEN71_RS14675 gamma-glutamyltransferase low > 153
Castellaniella sp019104865 MT123 0.21 ABCV34_RS14805 phosphoenolpyruvate carboxylase 0.26 ABCV34_RS11415 gamma-glutamyltransferase low > 48
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS12075 phosphoenolpyruvate carboxylase 0.19 LRK54_RS13360 gamma-glutamyltransferase low > 59
Rhodanobacter denitrificans MT42 0.21 LRK55_RS11810 phosphoenolpyruvate carboxylase 0.19 LRK55_RS13100 gamma-glutamyltransferase low > 63
Rhodanobacter sp000427505 FW510-R12 0.21 LRK53_RS16490 phosphoenolpyruvate carboxylase 0.19 LRK53_RS15220 gamma-glutamyltransferase low > 59
Sphingobium sp. HT1-2 0.21 GFF5056 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.36 GFF978 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) low > 95
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS12510 phosphoenolpyruvate carboxylase 0.35 A4249_RS14305 gamma-glutamyltransferase family protein 0.89 25
Caulobacter crescentus NA1000 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.34 CCNA_00565 gamma-glutamyltranspeptidase low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01560 phosphoenolpyruvate carboxylase 0.34 CCNA_00565 gamma-glutamyltranspeptidase low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.12 Echvi_3727 Phosphoenolpyruvate carboxylase 0.22 Echvi_3948 gamma-glutamyltranspeptidase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.12 CA264_05530 phosphoenolpyruvate carboxylase 0.24 CA264_13180 gamma-glutamyltransferase low > 74
Cellulophaga baltica 18 0.12 M666_RS09030 phosphoenolpyruvate carboxylase 0.26 M666_RS15495 gamma-glutamyltransferase low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS21350 phosphoenolpyruvate carboxylase 0.24 CA265_RS17620 gamma-glutamyltransferase low > 88

Not shown: 8 genomes with orthologs for CSW01_13390 only; 10 genomes with orthologs for CSW01_01035 only