Conservation of cofitness between CSW01_00260 and CSW01_00650 in Vibrio cholerae E7946 ATCC 55056

91 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 1.0 CSW01_00650 tyrosine recombinase XerC 0.78 1
Alteromonas macleodii MIT1002 0.46 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.45 MIT1002_00157 Tyrosine recombinase XerC low > 70
Pseudomonas stutzeri RCH2 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.40 Psest_3767 tyrosine recombinase XerC — —
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.38 Pf6N2E2_4416 Tyrosine recombinase XerC — —
Pseudomonas sp. S08-1 0.37 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.38 OH686_13785 tyrosine recombinase XerC — —
Pseudomonas sp. BP01 0.37 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 JOY50_RS22610 xerC tyrosine recombinase XerC — —
Pseudomonas sp. RS175 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.38 PFR28_04378 Tyrosine recombinase XerC — —
Pseudomonas putida KT2440 0.36 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.39 PP_5230 Tyrosine recombinase XerC — —
Pseudomonas sp. SVBP6 0.36 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 COO64_RS01270 xerC tyrosine recombinase XerC low > 93
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase 0.37 GEMAOFIL_05657 Tyrosine recombinase XerC — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.38 AO356_12725 recombinase XerC — —
Pseudomonas segetis P6 0.36 ACVTMO_RS00755 5-(carboxyamino)imidazole ribonucleotide synthase 0.40 ACVTMO_RS22525 xerC tyrosine recombinase XerC — —
Pseudomonas sp. DMC3 0.36 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase 0.38 GFF370 Tyrosine recombinase XerC low > 89
Pseudomonas orientalis W4I3 0.36 QF045_RS02475 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 QF045_RS01960 tyrosine recombinase XerC low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 Psyr_0185 tyrosine recombinase XerC subunit — —
Pseudomonas syringae pv. syringae B728a 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.39 Psyr_0185 tyrosine recombinase XerC subunit — —
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 PFLU_RS29280 tyrosine recombinase XerC — —
Pseudomonas fluorescens SBW25 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 PFLU_RS29280 tyrosine recombinase XerC — —
Pseudomonas simiae WCS417 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.34 PS417_27595 recombinase XerC — —
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.38 PfGW456L13_842 Tyrosine recombinase XerC — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.38 AO353_09050 recombinase XerC — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.38 Pf1N1B4_2171 Tyrosine recombinase XerC — —
Pseudomonas aeruginosa PA14 0.34 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase 0.40 IKLFDK_27050 tyrosine recombinase XerC low > 98
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS57855 5-(carboxyamino)imidazole ribonucleotide synthase 0.40 DQ20_RS49840 xerC;go_function=site-specific tyrosine recombinase XerC — —
Pseudomonas aeruginosa MRSN321 0.34 DY961_RS25395 5-(carboxyamino)imidazole ribonucleotide synthase 0.40 DY961_RS12285 xerC;go_function=site-specific tyrosine recombinase XerC low > 100
Marinobacter adhaerens HP15 0.33 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.44 HP15_250 site-specific tyrosine recombinase XerC — —
Lysobacter sp. OAE881 0.32 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 ABIE51_RS03035 tyrosine recombinase XerC low > 62
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 OKGIIK_15325 xerC tyrosine recombinase XerC — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.40 Xcc-8004.847.1 Site-specific tyrosine recombinase — —
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.45 B158DRAFT_0244 tyrosine recombinase XerC subunit — —
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 LRK54_RS08535 tyrosine recombinase XerC — —
Rhodanobacter denitrificans MT42 0.30 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.38 LRK55_RS08300 tyrosine recombinase XerC low > 63
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 ABZR86_RS15025 tyrosine recombinase XerC — —
Pectobacterium carotovorum WPP14 0.30 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 HER17_RS01350 tyrosine recombinase XerC low > 75
Klebsiella pneumoniae MKP103 0.29 KDGMDA_15000 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 KDGMDA_09700 tyrosine recombinase XerC low > 95
Shewanella sp. ANA-3 0.29 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.47 Shewana3_0393 tyrosine recombinase XerC (RefSeq) low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.29 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.55 GFF239 Tyrosine recombinase XerC — —
Serratia liquefaciens MT49 0.29 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 IAI46_00725 tyrosine recombinase XerC low > 87
Klebsiella michiganensis M5al 0.29 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 BWI76_RS01210 tyrosine recombinase XerC low > 92
Shewanella loihica PV-4 0.29 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.44 Shew_0325 tyrosine recombinase XerC (RefSeq) low > 60
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase 0.37 LRK53_RS02315 tyrosine recombinase XerC low > 59
Shewanella amazonensis SB2B 0.29 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.47 Sama_3247 integrase/recombinase XerC (RefSeq) low > 62
Dickeya dianthicola 67-19 0.29 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 HGI48_RS20045 tyrosine recombinase XerC low > 71
Rahnella sp. WP5 0.29 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 EX31_RS15165 tyrosine recombinase XerC low > 89
Erwinia tracheiphila HP pepo 2.2 0.29 IJEDHG_01025 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 IJEDHG_08780 xerC tyrosine recombinase XerC — —
Dickeya dianthicola ME23 0.29 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 DZA65_RS21090 tyrosine recombinase XerC low > 75
Dickeya dadantii 3937 0.28 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.56 DDA3937_RS19890 tyrosine recombinase XerC — —
Erwinia tracheiphila SCR3 0.28 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 LU632_RS24135 xerC tyrosine recombinase XerC — —
Azospirillum brasilense Sp245 0.28 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.23 AZOBR_RS03965 tyrosine recombinase XerC — —
Shewanella oneidensis MR-1 0.28 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.47 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.28 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 ECOLIN_RS21875 tyrosine recombinase XerC low > 55
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.54 EX28DRAFT_4480 tyrosine recombinase XerC — —
Pantoea sp. MT58 0.28 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 IAI47_18400 tyrosine recombinase XerC low > 76
Escherichia fergusonii Becca 0.28 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 EFB2_04826 Tyrosine recombinase XerC low > 86
Escherichia coli ECOR27 0.28 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 NOLOHH_06550 xerC tyrosine recombinase XerC low > 76
Erwinia amylovora T8 0.28 OLJFJH_17635 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 OLJFJH_06415 tyrosine recombinase XerC low > 58
Escherichia coli ECRC102 0.27 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 NIAGMN_12175 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC98 0.27 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 JDDGAC_18045 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC100 0.27 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 OKFHMN_14420 xerC tyrosine recombinase XerC low > 79
Escherichia coli ECRC101 0.27 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 MCAODC_04925 xerC tyrosine recombinase XerC — —
Escherichia coli BL21 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.55 ECD_03687 site-specific tyrosine recombinase low > 61
Escherichia coli ECRC99 0.27 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.55 KEDOAH_13730 xerC tyrosine recombinase XerC — —
Escherichia coli BW25113 0.27 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.54 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) low > 76
Escherichia coli ECOR38 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 HEPCGN_13125 xerC tyrosine recombinase XerC low > 88
Pantoea agglomerans CFBP13505 P0401 0.27 PagCFBP13505_RS10855 5-(carboxyamino)imidazole ribonucleotide synthase 0.53 PagCFBP13505_RS15380 tyrosine recombinase XerC — —
Escherichia coli ECRC62 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.54 BNILDI_04985 xerC tyrosine recombinase XerC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.54 OHPLBJKB_04239 Tyrosine recombinase XerC low > 74
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.22 Ga0059261_2764 Site-specific recombinase XerD — —
Enterobacter sp. TBS_079 0.27 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.52 MPMX20_04465 Tyrosine recombinase XerC low > 85
Agrobacterium fabrum C58 0.26 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.24 Atu2628 site-specific recombinase — —
Bosea sp. OAE506 0.26 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase 0.21 ABIE41_RS07870 tyrosine recombinase XerC low > 77
Rhodopseudomonas palustris CGA009 0.26 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.22 TX73_000945 tyrosine recombinase XerC — —
Rhizobium sp. OAE497 0.26 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 ABIE40_RS17950 tyrosine recombinase XerC low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.31 GFF547 Tyrosine recombinase XerC — —
Methylophilus sp. DMC18 0.24 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase 0.40 GFF1535 Tyrosine recombinase XerC — —
Magnetospirillum magneticum AMB-1 0.24 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase 0.25 AMB_RS21485 tyrosine recombinase XerC — —
Variovorax sp. SCN45 0.24 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.33 GFF4490 Site-specific tyrosine recombinase XerC low > 127
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 H281DRAFT_02202 integrase/recombinase XerC — —
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 0.36 BPHYT_RS01655 tyrosine recombinase XerC — —
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.35 HSERO_RS21475 recombinase XerC — —
Castellaniella sp019104865 MT123 0.23 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 ABCV34_RS13455 tyrosine recombinase XerC — —
Paraburkholderia graminis OAS925 0.23 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 ABIE53_000426 integrase/recombinase XerC — —
Variovorax sp. OAS795 0.23 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 ABID97_RS06150 tyrosine recombinase XerC — —
Dechlorosoma suillum PS 0.23 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.37 Dsui_0651 tyrosine recombinase XerC — —
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 QEN71_RS00355 tyrosine recombinase XerC — —
Acidovorax sp. GW101-3H11 0.22 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.31 Ac3H11_1995 Tyrosine recombinase XerC — —
Ralstonia solanacearum GMI1000 0.20 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 RS_RS00260 Tyrosine recombinase XerC 1 — —
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.31 RR42_RS00615 recombinase XerC — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 RALBFv3_RS09675 tyrosine recombinase XerC — —
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.34 ABZR87_RS05065 tyrosine recombinase XerC — —
Ralstonia solanacearum PSI07 0.20 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.35 RPSI07_RS23690 tyrosine recombinase XerC — —
Ralstonia solanacearum UW163 0.20 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.33 UW163_RS03905 tyrosine recombinase XerC — —

Not shown: 21 genomes with orthologs for CSW01_00260 only; 6 genomes with orthologs for CSW01_00650 only