Conservation of cofitness between CSW01_00650 and CSW01_00260 in Vibrio cholerae E7946 ATCC 55056

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00650 tyrosine recombinase XerC 1.0 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.78 5
Dickeya dadantii 3937 0.56 DDA3937_RS19890 tyrosine recombinase XerC 0.28 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase — —
Dickeya dianthicola 67-19 0.56 HGI48_RS20045 tyrosine recombinase XerC 0.29 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS21090 tyrosine recombinase XerC 0.29 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Rahnella sp. WP5 0.56 EX31_RS15165 tyrosine recombinase XerC 0.29 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase low > 89
Klebsiella michiganensis M5al 0.55 BWI76_RS01210 tyrosine recombinase XerC 0.29 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF239 Tyrosine recombinase XerC 0.29 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Serratia liquefaciens MT49 0.55 IAI46_00725 tyrosine recombinase XerC 0.29 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase low > 86
Escherichia coli BL21 0.55 ECD_03687 site-specific tyrosine recombinase 0.27 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase low > 61
Escherichia coli ECRC102 0.55 NIAGMN_12175 xerC tyrosine recombinase XerC 0.27 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECRC101 0.55 MCAODC_04925 xerC tyrosine recombinase XerC 0.27 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECRC99 0.55 KEDOAH_13730 xerC tyrosine recombinase XerC 0.27 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECRC100 0.55 OKFHMN_14420 xerC tyrosine recombinase XerC 0.27 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 37
Escherichia coli ECRC98 0.55 JDDGAC_18045 xerC tyrosine recombinase XerC 0.27 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Escherichia coli ECOR27 0.54 NOLOHH_06550 xerC tyrosine recombinase XerC 0.28 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Escherichia coli BW25113 0.54 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) 0.27 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) low > 76
Escherichia coli ECOR38 0.54 HEPCGN_13125 xerC tyrosine recombinase XerC 0.27 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_04239 Tyrosine recombinase XerC 0.27 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase low > 74
Escherichia coli Nissle 1917 0.54 ECOLIN_RS21875 tyrosine recombinase XerC 0.28 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase low > 55
Escherichia fergusonii Becca 0.54 EFB2_04826 Tyrosine recombinase XerC 0.28 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase low > 86
Escherichia coli ECRC62 0.54 BNILDI_04985 xerC tyrosine recombinase XerC 0.27 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Enterobacter asburiae PDN3 0.54 EX28DRAFT_4480 tyrosine recombinase XerC 0.28 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pectobacterium carotovorum WPP14 0.54 HER17_RS01350 tyrosine recombinase XerC 0.30 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase low > 75
Erwinia amylovora T8 0.54 OLJFJH_06415 tyrosine recombinase XerC 0.28 OLJFJH_17635 5-(carboxyamino)imidazole ribonucleotide synthase low > 58
Erwinia tracheiphila HP pepo 2.2 0.53 IJEDHG_08780 xerC tyrosine recombinase XerC 0.29 IJEDHG_01025 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Erwinia tracheiphila SCR3 0.53 LU632_RS24135 xerC tyrosine recombinase XerC 0.28 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Klebsiella pneumoniae MKP103 0.53 KDGMDA_09700 tyrosine recombinase XerC 0.29 KDGMDA_15000 5-(carboxyamino)imidazole ribonucleotide synthase low > 95
Pantoea sp. MT58 0.53 IAI47_18400 tyrosine recombinase XerC 0.28 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase low > 76
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS15380 tyrosine recombinase XerC 0.27 PagCFBP13505_RS10855 5-(carboxyamino)imidazole ribonucleotide synthase — —
Enterobacter sp. TBS_079 0.52 MPMX20_04465 Tyrosine recombinase XerC 0.27 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase low > 85
Shewanella sp. ANA-3 0.47 Shewana3_0393 tyrosine recombinase XerC (RefSeq) 0.29 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) 0.28 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.47 Sama_3247 integrase/recombinase XerC (RefSeq) 0.29 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_0244 tyrosine recombinase XerC subunit 0.31 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase — —
Alteromonas macleodii MIT1002 0.45 MIT1002_00157 Tyrosine recombinase XerC 0.46 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase low > 70
Shewanella loihica PV-4 0.44 Shew_0325 tyrosine recombinase XerC (RefSeq) 0.29 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) low > 60
Marinobacter adhaerens HP15 0.44 HP15_250 site-specific tyrosine recombinase XerC 0.33 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Pseudomonas segetis P6 0.40 MPMX49_04536 Tyrosine recombinase XerC 0.36 MPMX49_00154 N5-carboxyaminoimidazole ribonucleotide synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.40 Xcc-8004.847.1 Site-specific tyrosine recombinase 0.32 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Methylophilus sp. DMC18 0.40 GFF1535 Tyrosine recombinase XerC 0.24 GFF1769 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas aeruginosa PA14 0.40 IKLFDK_27050 tyrosine recombinase XerC 0.34 IKLFDK_26300 5-(carboxyamino)imidazole ribonucleotide synthase low > 100
Pseudomonas stutzeri RCH2 0.40 Psest_3767 tyrosine recombinase XerC 0.37 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pseudomonas sp. SVBP6 0.39 COO64_RS01270 xerC tyrosine recombinase XerC 0.36 COO64_RS01745 5-(carboxyamino)imidazole ribonucleotide synthase low > 93
Pseudomonas sp. BP01 0.39 JOY50_RS22610 xerC tyrosine recombinase XerC 0.37 JOY50_RS08825 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas putida KT2440 0.39 PP_5230 Tyrosine recombinase XerC 0.36 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0185 tyrosine recombinase XerC subunit 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0185 tyrosine recombinase XerC subunit 0.36 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_842 Tyrosine recombinase XerC 0.36 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas sp. S08-1 0.38 OH686_13785 tyrosine recombinase XerC 0.37 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas sp. DMC3 0.38 GFF370 Tyrosine recombinase XerC 0.36 GFF485 N5-carboxyaminoimidazole ribonucleotide synthase low > 89
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_2171 Tyrosine recombinase XerC 0.35 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_12725 recombinase XerC 0.36 AO356_11075 phosphoribosylaminoimidazole carboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_4416 Tyrosine recombinase XerC 0.37 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Lysobacter sp. OAE881 0.38 ABIE51_RS03035 tyrosine recombinase XerC 0.32 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase low > 62
Rhodanobacter denitrificans MT42 0.38 LRK55_RS08300 tyrosine recombinase XerC 0.30 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase low > 63
Pseudomonas sp. RS175 0.38 PFR28_04378 Tyrosine recombinase XerC 0.37 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_09050 recombinase XerC 0.35 AO353_09935 phosphoribosylaminoimidazole carboxylase — —
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS02315 tyrosine recombinase XerC 0.29 LRK53_RS14785 5-(carboxyamino)imidazole ribonucleotide synthase low > 59
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS08535 tyrosine recombinase XerC 0.30 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_15325 xerC tyrosine recombinase XerC 0.32 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase — —
Dechlorosoma suillum PS 0.37 Dsui_0651 tyrosine recombinase XerC 0.23 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein — —
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_05657 Tyrosine recombinase XerC 0.36 GEMAOFIL_00089 N5-carboxyaminoimidazole ribonucleotide synthase — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS15025 tyrosine recombinase XerC 0.30 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS01655 tyrosine recombinase XerC 0.23 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase — —
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS21475 recombinase XerC 0.23 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase — —
Ralstonia solanacearum PSI07 0.35 RPSI07_RS23690 tyrosine recombinase XerC 0.20 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS00355 tyrosine recombinase XerC 0.22 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25 0.34 PFLU_RS29280 tyrosine recombinase XerC 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_02202 integrase/recombinase XerC 0.24 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS29280 tyrosine recombinase XerC 0.36 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase — —
Pseudomonas simiae WCS417 0.34 PS417_27595 recombinase XerC 0.36 PS417_28115 phosphoribosylaminoimidazole carboxylase — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS05065 tyrosine recombinase XerC 0.20 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS00260 Tyrosine recombinase XerC 1 0.20 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase — —
Castellaniella sp019104865 MT123 0.34 ABCV34_RS13455 tyrosine recombinase XerC 0.23 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase — —
Variovorax sp. SCN45 0.33 GFF4490 Site-specific tyrosine recombinase XerC 0.24 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.73 82
Ralstonia solanacearum UW163 0.33 UW163_RS03905 tyrosine recombinase XerC 0.20 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS09675 tyrosine recombinase XerC 0.20 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase — —
Variovorax sp. OAS795 0.33 ABID97_RS06150 tyrosine recombinase XerC 0.23 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase — —
Paraburkholderia graminis OAS925 0.33 ABIE53_000426 integrase/recombinase XerC 0.23 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase — —
Acidovorax sp. GW101-3H11 0.31 Ac3H11_1995 Tyrosine recombinase XerC 0.22 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF547 Tyrosine recombinase XerC 0.25 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) — —
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS00615 recombinase XerC 0.20 RR42_RS03230 phosphoribosylaminoimidazole carboxylase — —
Magnetospirillum magneticum AMB-1 0.25 AMB_RS21485 tyrosine recombinase XerC 0.24 AMB_RS11140 5-(carboxyamino)imidazole ribonucleotide synthase — —
Rhizobium sp. OAE497 0.25 ABIE40_RS17950 tyrosine recombinase XerC 0.26 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase low > 107
Agrobacterium fabrum C58 0.24 Atu2628 site-specific recombinase 0.26 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit — —
Azospirillum brasilense Sp245 0.23 AZOBR_RS03965 tyrosine recombinase XerC 0.28 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase — —
Rhodopseudomonas palustris CGA009 0.22 TX73_000945 tyrosine recombinase XerC 0.26 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase — —
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2764 Site-specific recombinase XerD 0.27 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase — —
Bosea sp. OAE506 0.21 ABIE41_RS07870 tyrosine recombinase XerC 0.26 ABIE41_RS09245 5-(carboxyamino)imidazole ribonucleotide synthase low > 77

Not shown: 6 genomes with orthologs for CSW01_00650 only; 21 genomes with orthologs for CSW01_00260 only