| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS17800 | | long-chain-fatty-acid--CoA ligase | 1.0 | BWI76_RS20135 | | NADH-quinone oxidoreductase subunit M | 0.31 | 4 |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_02711 | | Long-chain-fatty-acid--CoA ligase | 0.95 | MPMX20_03207 | | NADH-quinone oxidoreductase subunit M | 0.17 | 64 |
| Enterobacter asburiae PDN3 | 0.95 | EX28DRAFT_0753 | | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II | 0.94 | EX28DRAFT_0333 | | proton-translocating NADH-quinone oxidoreductase, chain M | low | > 76 |
| Escherichia coli ECRC62 | 0.94 | BNILDI_15900 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | BNILDI_13435 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_01928 | | Long-chain-fatty-acid--CoA ligase | 0.93 | OHPLBJKB_01429 | | NADH-quinone oxidoreductase subunit M | low | > 73 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_04985 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | HEPCGN_22100 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 87 |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_17115 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | NOLOHH_14515 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 75 |
| Escherichia fergusonii Becca | 0.94 | EFB2_02195 | | Long-chain-fatty-acid--CoA ligase | 0.93 | EFB2_01582 | | NADH-quinone oxidoreductase subunit M | low | > 86 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_01470 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | NIAGMN_20665 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_01170 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | JDDGAC_26860 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 86 |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_26595 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | OKFHMN_22895 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 80 |
| Escherichia coli ECRC101 | 0.94 | MCAODC_18815 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | MCAODC_13935 | nuoM | NADH-quinone oxidoreductase subunit M | low | > 87 |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_01515 | fadD | long-chain-fatty-acid--CoA ligase FadD | 0.93 | KEDOAH_05300 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF2820 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.94 | GFF1880 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | low | > 78 |
| Escherichia coli BL21 | 0.93 | ECD_01775 | | acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) | 0.93 | ECD_02202 | | NADH:ubiquinone oxidoreductase, membrane subunit M | low | > 61 |
| Escherichia coli BW25113 | 0.93 | b1805 | fadD | acyl-CoA synthase (NCBI) | 0.93 | b2277 | nuoM | NADH dehydrogenase subunit M (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.93 | ECOLIN_RS10040 | | long-chain-fatty-acid--CoA ligase FadD | 0.93 | ECOLIN_RS13230 | | NADH-quinone oxidoreductase subunit M | low | > 55 |
| Serratia liquefaciens MT49 | 0.79 | IAI46_14535 | | long-chain-fatty-acid--CoA ligase FadD | 0.87 | IAI46_17655 | | NADH-quinone oxidoreductase subunit M | low | > 86 |
| Rahnella sp. WP5 | 0.79 | EX31_RS10600 | | long-chain-fatty-acid--CoA ligase FadD | 0.87 | EX31_RS19380 | | NADH-quinone oxidoreductase subunit M | low | > 89 |
| Pantoea sp. MT58 | 0.77 | IAI47_08835 | | long-chain-fatty-acid--CoA ligase FadD | 0.86 | IAI47_06415 | | NADH-quinone oxidoreductase subunit M | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.76 | HER17_RS11275 | | long-chain-fatty-acid--CoA ligase FadD | 0.85 | HER17_RS07180 | | NADH-quinone oxidoreductase subunit M | low | > 75 |
| Dickeya dianthicola 67-19 | 0.75 | HGI48_RS11260 | | long-chain-fatty-acid--CoA ligase FadD | 0.83 | HGI48_RS14255 | | NADH-quinone oxidoreductase subunit M | low | > 71 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS11605 | | long-chain-fatty-acid--CoA ligase FadD | 0.83 | DZA65_RS14930 | | NADH-quinone oxidoreductase subunit M | — | — |
| Shewanella oneidensis MR-1 | 0.66 | SO2581 | fadD-1 | long-chain-fatty-acid--CoA ligase (NCBI ptt file) | 0.69 | SO1010 | nuoM | NADH dehydrogenase I, M subunit (NCBI ptt file) | low | > 76 |
| Kangiella aquimarina DSM 16071 | 0.59 | B158DRAFT_1573 | | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II | 0.29 | B158DRAFT_0115 | | NADH dehydrogenase subunit M (EC 1.6.5.3) | low | > 40 |
| Rhodanobacter sp. FW510-T8 | 0.59 | OKGIIK_06445 | menE,fadK | long-chain-fatty-acid--CoA ligase | 0.28 | OKGIIK_05825 | nuoM | NADH-quinone oxidoreductase subunit M | — | — |
| Lysobacter sp. OAE881 | 0.59 | ABIE51_RS11545 | | long-chain fatty acid--CoA ligase | 0.29 | ABIE51_RS08370 | | NADH-quinone oxidoreductase subunit M | — | — |
| Rhodanobacter denitrificans MT42 | 0.58 | LRK55_RS00570 | | long-chain-fatty-acid--CoA ligase | 0.28 | LRK55_RS00845 | | NADH-quinone oxidoreductase subunit M | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.58 | LRK54_RS00795 | | long-chain-fatty-acid--CoA ligase | 0.28 | LRK54_RS01070 | | NADH-quinone oxidoreductase subunit M | — | — |
| Dechlorosoma suillum PS | 0.58 | Dsui_3212 | | acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II | 0.28 | Dsui_3038 | | proton-translocating NADH-quinone oxidoreductase, chain M | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS02155 | | AMP-binding protein | 0.29 | ABZR86_RS06055 | | NADH-quinone oxidoreductase subunit M | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.2896.1 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.29 | Xcc-8004.1995.1 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.56 | TX73_022105 | | long-chain fatty acid--CoA ligase | 0.32 | TX73_022035 | | NADH-quinone oxidoreductase subunit M | low | > 86 |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS18150 | | long-chain fatty acid--CoA ligase | 0.30 | RR42_RS05570 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS11410 | | AMP-binding protein | 0.27 | ABCV34_RS08690 | | NADH-quinone oxidoreductase subunit M | — | — |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS19285 | | long-chain fatty acid--CoA ligase | 0.27 | HSERO_RS08880 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Pseudomonas putida KT2440 | 0.55 | PP_4549 | | long-chain-fatty-acid/CoA ligase | 0.66 | PP_4130 | | NADH:ubiquinone oxidoreductase, membrane subunit M | 0.24 | 33 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS17295 | | long-chain fatty acid--CoA ligase | 0.29 | BPHYT_RS06685 | | NADH:ubiquinone oxidoreductase subunit M | 0.19 | 55 |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS06340 | | long-chain-fatty-acid--CoA ligase | 0.30 | RALBFv3_RS02915 | | NADH-quinone oxidoreductase subunit M | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_06226 | | long-chain acyl-CoA synthetase | 0.30 | H281DRAFT_04579 | | NADH dehydrogenase subunit M | — | — |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS07285 | | long-chain-fatty-acid--CoA ligase | 0.30 | UW163_RS10810 | | NADH-quinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_03310 | | long-chain fatty acid--CoA ligase | 0.69 | AO353_27795 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS02020 | | long-chain fatty acid--CoA ligase | 0.29 | ABZR87_RS14820 | | NADH-quinone oxidoreductase subunit M | — | — |
| Rhizobium sp. OAE497 | 0.55 | ABIE40_RS02155 | | long-chain fatty acid--CoA ligase | 0.30 | ABIE40_RS07245 | | NADH-quinone oxidoreductase subunit M | — | — |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS14290 | | long-chain-fatty-acid--CoA ligase | 0.30 | RS_RS10285 | | NADH-quinone oxidoreductase subunit M | — | — |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS10900 | | long-chain-fatty-acid--CoA ligase | 0.30 | RPSI07_RS14395 | | NADH-quinone oxidoreductase subunit M | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS22975 | | AMP-binding protein | 0.30 | QEN71_RS24090 | | NADH-quinone oxidoreductase subunit M | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_003625 | | long-chain acyl-CoA synthetase | 0.30 | ABIE53_001602 | | NADH-quinone oxidoreductase subunit M | — | — |
| Sinorhizobium meliloti 1021 | 0.54 | SMc02162 | | long-chain-fatty-acid--CoA ligase | 0.31 | SMc01926 | | NADH dehydrogenase subunit M | — | — |
| Pseudomonas sp. RS175 | 0.54 | PFR28_00585 | | Long-chain-fatty-acid--CoA ligase | 0.67 | PFR28_02638 | | NADH-quinone oxidoreductase subunit M | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_3834 | | AMP-dependent synthetase and ligase | 0.66 | Psyr_3208 | | NADH dehydrogenase subunit M | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_3834 | | AMP-dependent synthetase and ligase | 0.66 | Psyr_3208 | | NADH dehydrogenase subunit M | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_2872 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.67 | Pf6N2E2_266 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Pseudomonas simiae WCS417 | 0.54 | PS417_22065 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) | 0.67 | PS417_16630 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Agrobacterium fabrum C58 | 0.54 | Atu0405 | | long-chain-fatty-acid-CoA-ligase | 0.30 | Atu1282 | | NADH dehydrogenase I chain M | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_1911 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.68 | PfGW456L13_2622 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Acidovorax sp. GW101-3H11 | 0.54 | Ac3H11_663 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.28 | Ac3H11_1440 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF2607 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.28 | GFF3693 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS23680 | | long-chain fatty acid--CoA ligase | 0.67 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_05100 | | long-chain fatty acid--CoA ligase | 0.67 | AO356_22015 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Pseudomonas sp. S08-1 | 0.54 | OH686_05750 | | Long-chain-fatty-acid--CoA ligase | 0.70 | OH686_00100 | | NADH-ubiquinone oxidoreductase chain M | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS23680 | | long-chain fatty acid--CoA ligase | 0.67 | PFLU_RS18670 | | NADH-quinone oxidoreductase subunit M | low | > 109 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS04445 | | long-chain-fatty-acid--CoA ligase | 0.27 | ABID97_RS20435 | | NADH-quinone oxidoreductase subunit M | — | — |
| Variovorax sp. SCN45 | 0.52 | GFF7283 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.27 | GFF4762 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | — | — |
| Acinetobacter radioresistens SK82 | 0.50 | MPMX26_00141 | | Long-chain-fatty-acid--CoA ligase | 0.59 | MPMX26_02544 | | NADH-quinone oxidoreductase subunit M | — | — |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS11685 | | AMP-binding protein | 0.29 | ABIE41_RS17880 | | NADH-quinone oxidoreductase subunit M | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_575 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | 0.66 | Pf1N1B4_4029 | | NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | low | > 87 |
| Dinoroseobacter shibae DFL-12 | 0.43 | Dshi_1000 | | AMP-dependent synthetase and ligase (RefSeq) | 0.30 | Dshi_1328 | | proton-translocating NADH-quinone oxidoreductase, chain M (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.37 | PGA1_c25300 | | long-chain-fatty-acid--CoA ligase FadD | 0.29 | PGA1_c10540 | | NADH-quinone oxidoreductase subunit M | — | — |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_02151 | | Long-chain-fatty-acid--CoA ligase | 0.32 | MPMX19_01734 | | NADH-quinone oxidoreductase subunit M | — | — |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS31155 | | AMP-dependent synthetase | 0.31 | AZOBR_RS07225 | | NADH:ubiquinone oxidoreductase subunit M | — | — |
| Rhodospirillum rubrum S1H | 0.29 | Rru_A1312 | | AMP-dependent synthetase and ligase (NCBI) | 0.32 | Rru_A1567 | | Proton-translocating NADH-quinone oxidoreductase, chain M (NCBI) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_1004 | | Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II | 0.28 | Ga0059261_0697 | | proton-translocating NADH-quinone oxidoreductase, chain M | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.22 | CA264_07945 | | AMP-binding protein | 0.47 | CA264_04215 | | NADH-quinone oxidoreductase subunit M | low | > 74 |
| Caulobacter crescentus NA1000 | 0.19 | CCNA_01382 | | long-chain-fatty-acid--CoA ligase | 0.31 | CCNA_02016 | | NADH-quinone oxidoreductase chain M | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.19 | CCNA_01382 | | long-chain-fatty-acid--CoA ligase | 0.31 | CCNA_02016 | | NADH-quinone oxidoreductase chain M | — | — |
| Bacteroides stercoris CC31F | 0.19 | HMPREF1181_RS01205 | | AMP-binding protein | 0.20 | HMPREF1181_RS09040 | | NADH-quinone oxidoreductase subunit M | low | > 56 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.19 | BT2782 | | long-chain-fatty-acid--CoA ligase (NCBI ptt file) | 0.20 | BT4059 | | NADH dehydrogenase I, chain M (NCBI ptt file) | low | > 81 |
| Magnetospirillum magneticum AMB-1 | 0.19 | AMB_RS18140 | | malonyl-CoA synthase | 0.29 | AMB_RS13950 | | NADH-quinone oxidoreductase subunit M | — | — |
| Bacteroides ovatus ATCC 8483 | 0.19 | BACOVA_01082 | | AMP-binding domain protein | 0.20 | BACOVA_04854 | | proton-translocating NADH-quinone oxidoreductase, chain M | low | > 94 |
| Phocaeicola vulgatus CL09T03C04 | 0.18 | HMPREF1058_RS17680 | | AMP-binding protein | 0.20 | HMPREF1058_RS13295 | | NADH-quinone oxidoreductase subunit M | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.18 | ABI39_RS13880 | | AMP-binding protein | 0.20 | ABI39_RS08500 | | NADH-quinone oxidoreductase subunit M | low | > 72 |
| Mycobacterium tuberculosis H37Rv | 0.18 | Rv2505c | | Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) | 0.21 | Rv3157 | | Probable NADH dehydrogenase I (chain M) NUOK (NADH-ubiquinone oxidoreductase chain M) | low | > 58 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.12 | A4249_RS07965 | | long-chain-fatty-acid--CoA ligase | 0.32 | A4249_RS06345 | | NADH-quinone oxidoreductase subunit M | — | — |
| Synechococcus elongatus PCC 7942 | 0.11 | Synpcc7942_0918 | aas | long-chain-fatty-acid CoA ligase | 0.29 | Synpcc7942_1976 | ndhD | NAD(P)H-quinone oxidoreductase subunit D | low | > 38 |
Not shown: 13 genomes with orthologs for BWI76_RS17800 only; 4 genomes with orthologs for BWI76_RS20135 only