| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | 1.0 | BWI76_RS08405 | | succinate dehydrogenase flavoprotein subunit | 0.29 | 11 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.98 | GFF2347 | | Hydrogen peroxide-inducible genes activator | 0.91 | GFF4637 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.96 | EX28DRAFT_4424 | | Transcriptional regulator | 0.99 | EX28DRAFT_2268 | | succinate dehydrogenase subunit A (EC 1.3.5.1) | — | — |
| Enterobacter sp. TBS_079 | 0.96 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | 0.99 | MPMX20_01352 | | Succinate dehydrogenase flavoprotein subunit | low | > 85 |
| Escherichia coli ECOR38 | 0.96 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | HEPCGN_01295 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 87 |
| Escherichia coli BL21 | 0.96 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | 0.91 | ECD_00683 | | succinate dehydrogenase, flavoprotein subunit | low | > 61 |
| Escherichia coli ECRC62 | 0.96 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | BNILDI_21320 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 75 |
| Escherichia coli ECRC100 | 0.96 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | OKFHMN_06940 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 80 |
| Escherichia coli ECRC99 | 0.96 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | KEDOAH_21025 | sdhA | succinate dehydrogenase flavoprotein subunit | — | — |
| Escherichia coli ECRC101 | 0.96 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | MCAODC_26160 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.96 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | 0.91 | OHPLBJKB_02993 | | Succinate dehydrogenase flavoprotein subunit | low | > 73 |
| Escherichia coli Nissle 1917 | 0.96 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | 0.91 | ECOLIN_RS03855 | | succinate dehydrogenase flavoprotein subunit | low | > 55 |
| Escherichia coli BW25113 | 0.96 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | 0.91 | b0723 | sdhA | succinate dehydrogenase flavoprotein subunit (NCBI) | 0.30 | 55 |
| Escherichia coli ECOR27 | 0.96 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | NOLOHH_23325 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 75 |
| Escherichia coli ECRC98 | 0.96 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | JDDGAC_10595 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 86 |
| Escherichia coli ECRC102 | 0.96 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | 0.91 | NIAGMN_04990 | sdhA | succinate dehydrogenase flavoprotein subunit | — | — |
| Escherichia fergusonii Becca | 0.96 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | 0.91 | EFB2_03382 | | Succinate dehydrogenase flavoprotein subunit | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.90 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | 0.89 | HER17_RS14940 | | succinate dehydrogenase flavoprotein subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.89 | HGI48_RS20405 | | DNA-binding transcriptional regulator OxyR | 0.90 | HGI48_RS06490 | | succinate dehydrogenase flavoprotein subunit | low | > 71 |
| Dickeya dianthicola ME23 | 0.89 | DZA65_RS21450 | | DNA-binding transcriptional regulator OxyR | 0.90 | DZA65_RS06835 | | succinate dehydrogenase flavoprotein subunit | low | > 75 |
| Dickeya dadantii 3937 | 0.89 | DDA3937_RS00970 | | DNA-binding transcriptional regulator OxyR | 0.90 | DDA3937_RS06450 | | succinate dehydrogenase flavoprotein subunit | low | > 74 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | 0.89 | IAI46_06265 | | succinate dehydrogenase flavoprotein subunit | 0.49 | 53 |
| Pantoea sp. MT58 | 0.88 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | 0.89 | IAI47_13755 | | succinate dehydrogenase flavoprotein subunit | low | > 76 |
| Rahnella sp. WP5 | 0.88 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | 0.88 | EX31_RS23430 | | succinate dehydrogenase flavoprotein subunit | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.87 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | 0.88 | LU632_RS16105 | sdhA | succinate dehydrogenase flavoprotein subunit | low | > 74 |
| Vibrio cholerae E7946 ATCC 55056 | 0.63 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | 0.80 | CSW01_10440 | | succinate dehydrogenase flavoprotein subunit | low | > 62 |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | 0.49 | LRK55_RS07215 | | succinate dehydrogenase flavoprotein subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS04765 | | LysR substrate-binding domain-containing protein | 0.49 | LRK54_RS07475 | | succinate dehydrogenase flavoprotein subunit | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.42 | OKGIIK_01995 | lysR | DNA-binding transcriptional regulator OxyR | 0.48 | OKGIIK_08480 | sdhA | succinate dehydrogenase flavoprotein subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.42 | Xcc-8004.4224.1 | | Hydrogen peroxide-inducible genes activator | 0.49 | Xcc-8004.2458.1 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.41 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | 0.49 | ABZR86_RS06335 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Lysobacter sp. OAE881 | 0.39 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | 0.48 | ABIE51_RS12520 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Rhodospirillum rubrum S1H | 0.37 | Rru_A0334 | | Transcriptional Regulator, LysR family (NCBI) | 0.51 | Rru_A1204 | | Succinate dehydrogenase flavoprotein subunit (NCBI) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.68 | Psyr_2007 | | succinate dehydrogenase subunit A | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.36 | Psyr_0202 | | transcriptional regulator, LysR family | 0.68 | Psyr_2007 | | succinate dehydrogenase subunit A | — | — |
| Pseudomonas putida KT2440 | 0.36 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | 0.65 | PP_4191 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas stutzeri RCH2 | 0.36 | Psest_4191 | | Transcriptional regulator | 0.66 | Psest_2496 | | succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup | — | — |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | 0.55 | ABCV34_RS01695 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.36 | HSERO_RS18935 | | LysR family transcriptional regulator | 0.55 | HSERO_RS14905 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.36 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | 0.66 | Pf6N2E2_5853 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_04930 | | Hydrogen peroxide-inducible genes activator | 0.48 | MPMX19_02409 | | Succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas sp. S08-1 | 0.35 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | 0.67 | OH686_01980 | | succinate dehydrogenase, flavoprotein subunit | — | — |
| Pseudomonas simiae WCS417 | 0.35 | PS417_27865 | | LysR family transcriptional regulator | 0.67 | PS417_08885 | | succinate dehydrogenase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.55 | ABZR87_RS14560 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.35 | B158DRAFT_0567 | | Transcriptional regulator | 0.71 | B158DRAFT_1422 | | succinate dehydrogenase subunit A (EC 1.3.5.1) | — | — |
| Dechlorosoma suillum PS | 0.34 | Dsui_0823 | | transcriptional regulator | 0.54 | Dsui_2213 | | succinate dehydrogenase, flavoprotein subunit | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.66 | PFLU_RS08945 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas fluorescens SBW25 | 0.34 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | 0.66 | PFLU_RS08945 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | 0.54 | RALBFv3_RS02640 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS17385 | | LysR family transcriptional regulator | 0.56 | RR42_RS14445 | | fumarate reductase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.34 | AO356_12385 | | LysR family transcriptional regulator | 0.66 | AO356_19685 | | succinate dehydrogenase | — | — |
| Ralstonia solanacearum UW163 | 0.34 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | 0.54 | UW163_RS11085 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.34 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | 0.55 | QEN71_RS38670 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.34 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | 0.66 | PfGW456L13_4271 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Ralstonia solanacearum GMI1000 | 0.34 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.54 | RS_RS10020 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.55 | RPSI07_RS14675 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS03470 | | LysR family transcriptional regulator | 0.55 | BPHYT_RS33935 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas sp. RS175 | 0.34 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | 0.66 | PFR28_03098 | | Succinate dehydrogenase flavoprotein subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.34 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | 0.55 | ABIE53_004880 | | succinate dehydrogenase / fumarate reductase flavoprotein subunit | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_002235 | | LysR substrate-binding domain-containing protein | 0.50 | TX73_001125 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.34 | AO353_09315 | | LysR family transcriptional regulator | 0.66 | AO353_01845 | | succinate dehydrogenase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.34 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | 0.67 | Pf1N1B4_3679 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Sinorhizobium meliloti 1021 | 0.34 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | 0.45 | SMc02465 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Agrobacterium fabrum C58 | 0.33 | Atu4641 | | LysR family transcriptional regulator | 0.46 | Atu2643 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Marinobacter adhaerens HP15 | 0.33 | HP15_308 | | oxidative stress regulatory protein OxyR | 0.67 | HP15_1519 | | succinate dehydrogenase flavoprotein subunit-like protein | — | — |
| Acidovorax sp. GW101-3H11 | 0.32 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.55 | Ac3H11_3158 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Caulobacter crescentus NA1000 | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.47 | CCNA_03642 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_03811 | | LysR-family transcriptional regulator | 0.47 | CCNA_03642 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | 0.45 | PGA1_c03760 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_0159 | | Transcriptional regulator | 0.51 | Ga0059261_1330 | | succinate dehydrogenase subunit A (EC 1.3.5.1) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.30 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | 0.47 | AMB_RS20000 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF2803 | | Hydrogen peroxide-inducible genes activator | 0.54 | GFF3368 | | Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | — | — |
| Rhizobium sp. OAE497 | 0.29 | ABIE40_RS29270 | | LysR substrate-binding domain-containing protein | 0.46 | ABIE40_RS18020 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Bosea sp. OAE506 | 0.29 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | 0.48 | ABIE41_RS05745 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_0727 | | transcriptional regulator, LysR family (RefSeq) | 0.47 | Dshi_2865 | | succinate dehydrogenase, flavoprotein subunit (RefSeq) | — | — |
| Acinetobacter radioresistens SK82 | 0.28 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | 0.52 | MPMX26_00749 | | Succinate dehydrogenase flavoprotein subunit | — | — |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_01120 | | Morphology and auto-aggregation control protein | 0.79 | MIT1002_01946 | | Succinate dehydrogenase flavoprotein subunit | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.26 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | 0.49 | A4249_RS13430 | | succinate dehydrogenase flavoprotein subunit | — | — |
| Shewanella oneidensis MR-1 | 0.26 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.76 | SO1928 | sdhA | succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) | — | — |
| Shewanella sp. ANA-3 | 0.26 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | 0.76 | Shewana3_1708 | sdhA | succinate dehydrogenase flavoprotein subunit (RefSeq) | — | — |
| Shewanella loihica PV-4 | 0.25 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | 0.76 | Shew_1653 | sdhA | succinate dehydrogenase flavoprotein subunit (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.24 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | 0.77 | Sama_1425 | sdhA | succinate dehydrogenase flavoprotein subunit (RefSeq) | — | — |
Not shown: 11 genomes with orthologs for BWI76_RS00865 only; 6 genomes with orthologs for BWI76_RS08405 only