| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS09760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 1.0 | BWI76_RS04665 | | 3-isopropylmalate dehydratase small subunit | 0.82 | 8 |
| Enterobacter asburiae PDN3 | 0.92 | EX28DRAFT_2027 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | 0.92 | EX28DRAFT_3667 | | 3-isopropylmalate dehydratase, small subunit | 0.57 | 37 |
| Enterobacter sp. TBS_079 | 0.92 | MPMX20_01567 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.93 | MPMX20_00766 | | 3-isopropylmalate dehydratase small subunit 1 | 0.84 | 49 |
| Escherichia coli ECRC102 | 0.88 | NIAGMN_03205 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | NIAGMN_08580 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli BW25113 | 0.88 | b0908 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | 0.88 | b0071 | leuD | isopropylmalate isomerase small subunit (NCBI) | 0.90 | 27 |
| Escherichia coli ECRC101 | 0.88 | MCAODC_24875 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | MCAODC_01245 | leuD | 3-isopropylmalate dehydratase small subunit | 0.86 | 36 |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_22045 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | NOLOHH_03075 | leuD | 3-isopropylmalate dehydratase small subunit | 0.83 | 72 |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | ECOLIN_RS00385 | | 3-isopropylmalate dehydratase small subunit | 0.81 | 12 |
| Escherichia coli ECRC99 | 0.88 | KEDOAH_22250 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | KEDOAH_17425 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Escherichia coli ECRC98 | 0.88 | JDDGAC_09095 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | JDDGAC_14325 | leuD | 3-isopropylmalate dehydratase small subunit | 0.93 | 31 |
| Escherichia coli ECRC100 | 0.88 | OKFHMN_05485 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.87 | OKFHMN_10730 | leuD | 3-isopropylmalate dehydratase small subunit | 0.92 | 59 |
| Escherichia coli ECRC62 | 0.88 | BNILDI_20300 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | BNILDI_08535 | leuD | 3-isopropylmalate dehydratase small subunit | 0.96 | 30 |
| Escherichia fergusonii Becca | 0.87 | EFB2_03156 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | EFB2_03974 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Escherichia coli BL21 | 0.87 | ECD_00912 | | 5-enolpyruvylshikimate-3-phosphate synthetase | 0.88 | ECD_00073 | | 3-isopropylmalate dehydratase small subunit | 0.72 | 51 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.87 | OHPLBJKB_02760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | OHPLBJKB_03586 | | 3-isopropylmalate dehydratase small subunit | low | > 73 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.87 | GFF3665 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | 0.93 | GFF167 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | low | > 78 |
| Escherichia coli ECOR38 | 0.87 | HEPCGN_23035 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.88 | HEPCGN_08710 | leuD | 3-isopropylmalate dehydratase small subunit | 0.86 | 68 |
| Pantoea sp. MT58 | 0.83 | IAI47_12860 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.83 | IAI47_16015 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Rahnella sp. WP5 | 0.83 | EX31_RS18250 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | EX31_RS03695 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Serratia liquefaciens MT49 | 0.81 | IAI46_08640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | low | > 86 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS09675 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dickeya dianthicola ME23 | 0.80 | DZA65_RS09995 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dickeya dianthicola 67-19 | 0.80 | HGI48_RS09685 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.83 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Erwinia tracheiphila SCR3 | 0.79 | LU632_RS09795 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.74 | LU632_RS02865 | leuD | 3-isopropylmalate dehydratase small subunit | 0.70 | 37 |
| Pectobacterium carotovorum WPP14 | 0.79 | HER17_RS12285 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.84 | HER17_RS03070 | | 3-isopropylmalate dehydratase small subunit | 0.94 | 9 |
| Vibrio cholerae E7946 ATCC 55056 | 0.73 | CSW01_08705 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.73 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | low | > 62 |
| Shewanella amazonensis SB2B | 0.68 | Sama_1734 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.60 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.67 | SO2404 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) | 0.60 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.87 | 35 |
| Alteromonas macleodii MIT1002 | 0.67 | MIT1002_02191 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.62 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | — | — |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_1975 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.59 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.91 | 36 |
| Shewanella loihica PV-4 | 0.65 | Shew_1952 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.63 | Shew_3469 | | isopropylmalate isomerase small subunit (RefSeq) | 0.77 | 41 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS04085 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.58 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.75 | 66 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS14895 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.58 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.72 | 60 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_03922 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.59 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_003154 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.57 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.53 | HSERO_RS18420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.57 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.51 | RS_RS04510 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.59 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.51 | RR42_RS04475 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.59 | RR42_RS14390 | | 3-isopropylmalate dehydratase | 0.82 | 22 |
| Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS19695 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.59 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum UW163 | 0.51 | UW163_RS16035 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.58 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS13775 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.58 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS09465 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.60 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.88 | 11 |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS05420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.48 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Bacteroides thetaiotaomicron VPI-5482 | 0.26 | BT2186 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) | 0.39 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Parabacteroides merdae CL09T00C40 | 0.25 | HMPREF1078_RS05635 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.25 | Echvi_0122 | | 5-enolpyruvylshikimate-3-phosphate synthase | 0.38 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.25 | B158DRAFT_2432 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | 0.59 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | low | > 40 |
| Bacteroides ovatus ATCC 8483 | 0.25 | BACOVA_03157 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Bacteroides stercoris CC31F | 0.25 | HMPREF1181_RS09330 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.43 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | low | > 56 |
| Agrobacterium fabrum C58 | 0.24 | Atu0642 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.49 | Atu2790 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.24 | ABZR88_RS07000 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.45 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Phocaeicola dorei CL03T12C01 | 0.24 | ABI39_RS09575 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.61 | 45 |
| Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | low | > 109 |
| Phocaeicola vulgatus CL09T03C04 | 0.23 | HMPREF1058_RS13970 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | HMPREF1058_RS14555 | | 3-isopropylmalate dehydratase small subunit | 0.45 | 48 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.23 | CA265_RS11640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.44 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Pseudomonas simiae WCS417 | 0.22 | PS417_12855 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.61 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.79 | 24 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_13100 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.43 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | low | > 74 |
| Lysobacter sp. OAE881 | 0.19 | ABIE51_RS12135 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.18 | ABZR86_RS02230 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.40 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.86 | 60 |
| Mycobacterium tuberculosis H37Rv | 0.17 | Rv3227 | | 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) | 0.39 | Rv2987c | | Probable 3-isopropylmalate dehydratase (small subunit) LeuD (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_06920 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.40 | OKGIIK_13590 | leuD | 3-isopropylmalate dehydratase small subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.17 | Xcc-8004.3281.1 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | 0.61 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.83 | 15 |
| Rhodanobacter denitrificans MT42 | 0.17 | LRK55_RS00130 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.45 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | low | > 63 |
| Synechococcus elongatus PCC 7942 | 0.16 | Synpcc7942_0232 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.27 | Synpcc7942_2548 | leuD | isopropylmalate isomerase small subunit | — | — |
| Sinorhizobium meliloti 1021 | 0.16 | SMc00333 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.49 | SMc03795 | | isopropylmalate isomerase small subunit | — | — |
| Bifidobacterium breve UCC2003 | 0.16 | BBR_RS14370 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.43 | BBR_RS19625 | | 3-isopropylmalate dehydratase small subunit | low | > 34 |
| Rhodanobacter denitrificans FW104-10B01 | 0.16 | LRK54_RS00390 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.45 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.15 | A4249_RS10920 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.40 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.15 | Dshi_1022 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.51 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | — | — |
| Magnetospirillum magneticum AMB-1 | 0.15 | AMB_RS21555 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.51 | AMB_RS20565 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.15 | Ga0059261_0167 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | 0.37 | Ga0059261_4225 | | 3-isopropylmalate dehydratase, small subunit | — | — |
| Phaeobacter inhibens DSM 17395 | 0.15 | PGA1_c04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase AroA | 0.49 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Bosea sp. OAE506 | 0.15 | ABIE41_RS03910 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.47 | ABIE41_RS11640 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_000320 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.51 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Caulobacter crescentus NA1000 | 0.14 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.14 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.42 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | low | > 67 |
| Rhodospirillum rubrum S1H | 0.12 | Rru_A0295 | | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | 0.50 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.12 | MPMX19_02233 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.51 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | — | — |
| Azospirillum brasilense Sp245 | 0.12 | AZOBR_RS03090 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.50 | AZOBR_RS14135 | | isopropylmalate isomerase | — | — |
Not shown: 5 genomes with orthologs for BWI76_RS09760 only; 17 genomes with orthologs for BWI76_RS04665 only