Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS33840 in Burkholderia phytofirmans PsJN

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS33840 amidophosphoribosyltransferase 0.70 10
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.98 ABIE53_004816 amidophosphoribosyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.99 H281DRAFT_06060 amidophosphoribosyltransferase 0.48 33
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.91 QEN71_RS17680 amidophosphoribosyltransferase 0.82 20
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.76 HSERO_RS16445 amidophosphoribosyltransferase — —
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.68 Dsui_3186 amidophosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.65 ABCV34_RS04130 amidophosphoribosyltransferase — —
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.57 ABZR86_RS06775 amidophosphoribosyltransferase 0.33 57
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.60 HP15_1821 amidophosphoribosyltransferase — —
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.58 PP_2000 amidophosphoribosyl transferase low > 96
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.61 OH686_04420 amidophosphoribosyltransferase — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.56 OKGIIK_05570 purF amidophosphoribosyltransferase low > 52
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.58 Psest_2579 amidophosphoribosyltransferase low > 67
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.59 Pf6N2E2_76 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.54 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.59 AO353_20690 amidophosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.59 AO356_21465 amidophosphoribosyltransferase low > 104
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.59 PFR28_02811 Amidophosphoribosyltransferase low > 88
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.58 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.58 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.59 PfGW456L13_3935 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.58 Psyr_1668 amidophosphoribosyltransferase 0.44 45
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.58 Psyr_1668 amidophosphoribosyltransferase low > 86
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.58 PS417_18535 amidophosphoribosyltransferase — —
Lysobacter sp. OAE881 0.73 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.53 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.58 MPMX26_01122 Amidophosphoribosyltransferase low > 36
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.79 RPSI07_RS14765 amidophosphoribosyltransferase — —
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.55 HER17_RS07020 amidophosphoribosyltransferase 0.76 69
Shewanella loihica PV-4 0.69 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) 0.58 Shew_2302 amidophosphoribosyltransferase (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.77 ABZR87_RS14465 amidophosphoribosyltransferase — —
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.80 RR42_RS14325 amidophosphoribosyltransferase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.78 RALBFv3_RS02550 amidophosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.78 UW163_RS11175 amidophosphoribosyltransferase — —
Shewanella amazonensis SB2B 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) 0.58 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.54 EX31_RS19570 amidophosphoribosyltransferase low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.78 RS_RS09930 amidophosphoribosyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.55 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.55 MPMX20_03247 Amidophosphoribosyltransferase low > 85
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.56 IAI46_17810 amidophosphoribosyltransferase low > 86
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.55 EX28DRAFT_0292 amidophosphoribosyltransferase (EC 2.4.2.14) low > 76
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.55 ECOLIN_RS13405 amidophosphoribosyltransferase — —
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.55 NOLOHH_14335 purF amidophosphoribosyltransferase 0.78 17
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.55 EFB2_01546 Amidophosphoribosyltransferase low > 86
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.61 B158DRAFT_1488 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.55 b2312 purF amidophosphoribosyltransferase (NCBI) 0.47 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.55 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.55 NIAGMN_20485 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.55 JDDGAC_26675 purF amidophosphoribosyltransferase low > 86
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.55 BNILDI_13255 purF amidophosphoribosyltransferase 0.89 12
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.55 MCAODC_13755 purF amidophosphoribosyltransferase low > 87
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.55 KEDOAH_05480 purF amidophosphoribosyltransferase — —
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.55 OKFHMN_22715 purF amidophosphoribosyltransferase 0.90 20
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.55 ECD_02237 amidophosphoribosyltransferase 0.62 6
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.55 HEPCGN_21910 purF amidophosphoribosyltransferase 0.94 6
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.55 DDA3937_RS14435 amidophosphoribosyltransferase low > 74
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.55 IAI47_06275 amidophosphoribosyltransferase low > 76
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.55 BWI76_RS20350 amidophosphoribosyltransferase 0.41 26
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.55 LU632_RS07865 purF amidophosphoribosyltransferase low > 74
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.64 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Shewanella oneidensis MR-1 0.67 SO2445 thiC thiamin biosynthesis protein ThiC (NCBI ptt file) 0.58 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) 0.31 12
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.58 CSW01_05115 amidophosphoribosyltransferase low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.60 MIT1002_02524 Amidophosphoribosyltransferase low > 70
Shewanella sp. ANA-3 0.66 Shewana3_1936 thiamine biosynthesis protein ThiC (RefSeq) 0.58 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) low > 73
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.55 DZA65_RS15335 amidophosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.55 HGI48_RS14405 amidophosphoribosyltransferase low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.65 GFF300 Amidophosphoribosyltransferase (EC 2.4.2.14) — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.64 Ac3H11_2608 Amidophosphoribosyltransferase (EC 2.4.2.14) 0.81 28
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.63 ABID97_RS21635 amidophosphoribosyltransferase — —
Azospirillum brasilense Sp245 0.64 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.28 AZOBR_RS08310 amidophosphoribosyltransferase 0.57 14
Magnetospirillum magneticum AMB-1 0.63 AMB_RS01125 phosphomethylpyrimidine synthase 0.28 AMB_RS10545 amidophosphoribosyltransferase — —
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09110 thiamine biosynthesis protein ThiC 0.28 PGA1_c10810 amidophosphoribosyltransferase PurF low > 62
Sinorhizobium meliloti 1021 0.62 SM_b20615 thiamine biosynthesis protein ThiC 0.27 SMc00554 amidophosphoribosyltransferase low > 103
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.27 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14) — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.28 Dshi_2132 amidophosphoribosyltransferase (RefSeq) — —
Agrobacterium fabrum C58 0.62 Atu2569 thiamine biosynthesis protein 0.27 Atu1075 amidophosphoribosyltransferase 0.69 44
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_01730 amidophosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_01730 amidophosphoribosyltransferase low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS15715 phosphomethylpyrimidine synthase ThiC 0.28 A4249_RS03735 amidophosphoribosyltransferase — —
Bosea sp. OAE506 0.60 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.28 ABIE41_RS17810 amidophosphoribosyltransferase 0.86 3
Rhodopseudomonas palustris CGA009 0.60 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.30 TX73_015990 amidophosphoribosyltransferase — —
Azospirillum sp. SherDot2 0.60 MPMX19_00336 Phosphomethylpyrimidine synthase 0.29 MPMX19_00906 Amidophosphoribosyltransferase low > 112
Rhodospirillum rubrum S1H 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.28 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Mycobacterium tuberculosis H37Rv 0.51 Rv0423c Probable thiamine biosynthesis protein ThiC 0.27 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase) — —

Not shown: 11 genomes with orthologs for BPHYT_RS13220 only; 10 genomes with orthologs for BPHYT_RS33840 only