Conservation of cofitness between BPHYT_RS16245 and BPHYT_RS16840 in Burkholderia phytofirmans PsJN

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16245 phosphoribosylaminoimidazole carboxylase 1.0 BPHYT_RS16840 transketolase 0.77 14
Paraburkholderia bryophila 376MFSha3.1 0.95 H281DRAFT_04185 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 H281DRAFT_06314 transketolase
Paraburkholderia graminis OAS925 0.92 ABIE53_003423 5-(carboxyamino)imidazole ribonucleotide synthase 0.95 ABIE53_003537 transketolase
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS02450 5-(carboxyamino)imidazole ribonucleotide synthase 0.90 QEN71_RS27010 transketolase
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS03370 phosphoribosylaminoimidazole carboxylase 0.71 HSERO_RS07115 transketolase
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS03230 phosphoribosylaminoimidazole carboxylase 0.69 RR42_RS17575 transketolase
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08090 5-(carboxyamino)imidazole ribonucleotide synthase 0.69 ABZR87_RS01440 transketolase
Variovorax sp. SCN45 0.49 GFF5513 N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) 0.60 GFF7176 Transketolase (EC 2.2.1.1)
Ralstonia solanacearum GMI1000 0.49 RS_RS02885 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 RS_RS13760 transketolase
Ralstonia solanacearum PSI07 0.49 RPSI07_RS21130 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 RPSI07_RS11430 transketolase
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS12200 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 RALBFv3_RS05870 transketolase
Ralstonia solanacearum UW163 0.49 UW163_RS01410 5-(carboxyamino)imidazole ribonucleotide synthase 0.68 UW163_RS07755 transketolase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF2770 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.62 GFF2487 Transketolase (EC 2.2.1.1)
Castellaniella sp019104865 MT123 0.48 ABCV34_RS00565 5-(carboxyamino)imidazole ribonucleotide synthase 0.66 ABCV34_RS15450 transketolase
Variovorax sp. OAS795 0.48 ABID97_RS01700 5-(carboxyamino)imidazole ribonucleotide synthase 0.59 ABID97_RS02445 transketolase
Acidovorax sp. GW101-3H11 0.44 Ac3H11_675 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.63 Ac3H11_649 Transketolase (EC 2.2.1.1)
Dechlorosoma suillum PS 0.42 Dsui_0091 phosphoribosylaminoimidazole carboxylase, PurK protein 0.63 Dsui_1561 transketolase
Rhizobium sp. OAE497 0.35 ABIE40_RS16070 5-(carboxyamino)imidazole ribonucleotide synthase 0.44 ABIE40_RS15865 transketolase
Sinorhizobium meliloti 1021 0.35 SMc04002 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.51 SMc02342 transketolase low > 103
Azospirillum sp. SherDot2 0.34 MPMX19_01418 N5-carboxyaminoimidazole ribonucleotide synthase 0.58 MPMX19_02942 Transketolase 1
Azospirillum brasilense Sp245 0.34 AZOBR_RS06140 phosphoribosylaminoimidazole carboxylase 0.47 AZOBR_RS09010 transketolase
Agrobacterium fabrum C58 0.33 Atu3755 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.44 Atu3736 transketolase
Rhodospirillum rubrum S1H 0.33 Rru_A1051 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) 0.54 Rru_A2405 transketolase (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS08935 5-(carboxyamino)imidazole ribonucleotide synthase 0.43 A4249_RS00780 transketolase
Pseudomonas stutzeri RCH2 0.29 Psest_4068 phosphoribosylaminoimidazole carboxylase, PurK protein 0.65 Psest_0328 transketolase, bacterial and yeast
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_1428 5-(carboxyamino)imidazole ribonucleotide synthase 0.46 Ga0059261_0731 transketolase, bacterial and yeast
Acinetobacter radioresistens SK82 0.29 MPMX26_03050 N5-carboxyaminoimidazole ribonucleotide synthase 0.60 MPMX26_01775 Transketolase 1
Pseudomonas sp. RS175 0.29 PFR28_04495 N5-carboxyaminoimidazole ribonucleotide synthase 0.62 PFR28_04188 Transketolase 1
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_4081 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.62 Pf6N2E2_4655 Transketolase (EC 2.2.1.1)
Pseudomonas sp. S08-1 0.28 OH686_13380 N5-carboxyaminoimidazole ribonucleotide synthase 0.63 OH686_10770 transketolase
Pseudomonas putida KT2440 0.28 PP_5335 N5-carboxyaminoimidazole ribonucleotide synthase 0.63 PP_4965 transketolase A
Rhodopseudomonas palustris CGA009 0.28 TX73_021645 5-(carboxyamino)imidazole ribonucleotide synthase 0.48 TX73_024110 transketolase
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_11075 phosphoribosylaminoimidazole carboxylase 0.62 AO356_13680 transketolase
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 PFLU_RS28095 transketolase
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_2028 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.62 Pf1N1B4_2397 Transketolase (EC 2.2.1.1)
Pseudomonas fluorescens SBW25 0.28 PFLU_RS29800 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 PFLU_RS28095 transketolase
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_747 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.59 PfGW456L13_1064 Transketolase (EC 2.2.1.1)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 Psyr_4792 transketolase
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_5047 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 Psyr_4792 transketolase
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_09935 phosphoribosylaminoimidazole carboxylase 0.62 AO353_07955 transketolase
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03050 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.60 OKGIIK_01095 tkt transketolase
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS09830 5-(carboxyamino)imidazole ribonucleotide synthase 0.61 ABZR86_RS18655 transketolase
Pseudomonas simiae WCS417 0.27 PS417_28115 phosphoribosylaminoimidazole carboxylase 0.62 PS417_26440 transketolase
Xanthomonas campestris pv. campestris strain 8004 0.27 Xcc-8004.2012.1 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.59 Xcc-8004.1180.1 Transketolase (EC 2.2.1.1)
Lysobacter sp. OAE881 0.27 ABIE51_RS15390 5-(carboxyamino)imidazole ribonucleotide synthase 0.61 ABIE51_RS17120 transketolase
Rhodanobacter denitrificans MT42 0.26 LRK55_RS13530 5-(carboxyamino)imidazole ribonucleotide synthase 0.61 LRK55_RS05505 transketolase low > 63
Marinobacter adhaerens HP15 0.26 HP15_2350 phosphoribosylaminoimidazole carboxylase ATPase subunit 0.61 HP15_2913 bacterial transketolase
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS13815 5-(carboxyamino)imidazole ribonucleotide synthase 0.62 LRK54_RS05750 transketolase
Alteromonas macleodii MIT1002 0.25 MIT1002_00522 N5-carboxyaminoimidazole ribonucleotide synthase 0.64 MIT1002_00861 Transketolase 1
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_1428 purK phosphoribosylaminoimidazole carboxylase ATPase subunit 0.47 Synpcc7942_0538 tktA transketolase
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_00260 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 CSW01_17330 transketolase low > 62
Kangiella aquimarina DSM 16071 0.23 B158DRAFT_0610 5-(carboxyamino)imidazole ribonucleotide synthase 0.62 B158DRAFT_0510 transketolase, bacterial and yeast
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF4438 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 0.64 GFF3028 Transketolase (EC 2.2.1.1) low > 78
Shewanella loihica PV-4 0.21 Shew_1249 phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) 0.64 Shew_0752 transketolase (RefSeq)
Klebsiella michiganensis M5al 0.20 BWI76_RS07065 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 BWI76_RS24015 transketolase
Rahnella sp. WP5 0.20 EX31_RS22620 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 EX31_RS20285 transketolase low > 89
Serratia liquefaciens MT49 0.20 IAI46_05370 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 IAI46_21045 transketolase
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2460 phosphoribosylaminoimidazole carboxylase, PurK protein 0.63 EX28DRAFT_2974 transketolase, bacterial and yeast
Pantoea sp. MT58 0.19 IAI47_14355 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 IAI47_03680 transketolase low > 76
Escherichia coli BW25113 0.19 b0522 purK phosphoribosylaminoimidazole carboxylase (NCBI) 0.65 b2935 tktA transketolase 1, thiamin-binding (NCBI) low > 76
Escherichia coli ECOR38 0.19 HEPCGN_06480 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 HEPCGN_18630 tkt transketolase low > 87
Enterobacter sp. TBS_079 0.19 MPMX20_01097 N5-carboxyaminoimidazole ribonucleotide synthase 0.64 MPMX20_03780 Transketolase 1 low > 85
Escherichia coli Nissle 1917 0.19 ECOLIN_RS03025 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 ECOLIN_RS16330 transketolase 0.54 14
Escherichia fergusonii Becca 0.19 EFB2_03540 N5-carboxyaminoimidazole ribonucleotide synthase 0.65 EFB2_00966 Transketolase 1 low > 86
Escherichia coli BL21 0.19 ECD_00472 N5-carboxyaminoimidazole ribonucleotide synthase 0.65 ECD_02765 transketolase 1, thiamine triphosphate-binding low > 61
Escherichia coli ECOR27 0.19 NOLOHH_00830 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 NOLOHH_11230 tkt transketolase low > 75
Escherichia coli ECRC102 0.19 NIAGMN_05895 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 NIAGMN_17090 tkt transketolase
Escherichia coli ECRC98 0.19 JDDGAC_11490 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 JDDGAC_22955 tkt transketolase low > 86
Escherichia coli ECRC99 0.19 KEDOAH_20130 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 KEDOAH_08815 tkt transketolase
Escherichia coli ECRC62 0.19 BNILDI_22260 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 BNILDI_09775 tkt transketolase low > 75
Escherichia coli ECRC101 0.19 MCAODC_27060 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 MCAODC_09845 tkt transketolase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_03159 N5-carboxyaminoimidazole ribonucleotide synthase 0.65 OHPLBJKB_00781 Transketolase 1
Escherichia coli ECRC100 0.19 OKFHMN_07840 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.65 OKFHMN_19325 tkt transketolase
Dickeya dianthicola ME23 0.18 DZA65_RS15995 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 DZA65_RS19585 transketolase
Dickeya dianthicola 67-19 0.18 HGI48_RS15190 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 HGI48_RS18450 transketolase
Dickeya dadantii 3937 0.18 DDA3937_RS15110 5-(carboxyamino)imidazole ribonucleotide synthase 0.64 DDA3937_RS18525 transketolase
Pectobacterium carotovorum WPP14 0.18 HER17_RS06470 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 HER17_RS02680 transketolase low > 75
Erwinia tracheiphila SCR3 0.18 LU632_RS15250 purK 5-(carboxyamino)imidazole ribonucleotide synthase 0.63 LU632_RS05520 tkt transketolase low > 74
Shewanella amazonensis SB2B 0.17 Sama_1063 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.63 Sama_2759 transketolase (RefSeq)
Shewanella sp. ANA-3 0.16 Shewana3_3156 phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) 0.64 Shewana3_3353 transketolase (RefSeq)
Shewanella oneidensis MR-1 0.15 SO3555 purK phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) 0.64 SO0930 tkt transketolase (NCBI ptt file)

Not shown: 12 genomes with orthologs for BPHYT_RS16245 only; 6 genomes with orthologs for BPHYT_RS16840 only