Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS16245 | | phosphoribosylaminoimidazole carboxylase | 1.0 | BPHYT_RS16840 | | transketolase | 0.77 | 14 |
Paraburkholderia bryophila 376MFSha3.1 | 0.95 | H281DRAFT_04185 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.95 | H281DRAFT_06314 | | transketolase | — | — |
Paraburkholderia graminis OAS925 | 0.92 | ABIE53_003423 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.95 | ABIE53_003537 | | transketolase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.85 | QEN71_RS02450 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.90 | QEN71_RS27010 | | transketolase | — | — |
Herbaspirillum seropedicae SmR1 | 0.56 | HSERO_RS03370 | | phosphoribosylaminoimidazole carboxylase | 0.71 | HSERO_RS07115 | | transketolase | — | — |
Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS03230 | | phosphoribosylaminoimidazole carboxylase | 0.69 | RR42_RS17575 | | transketolase | — | — |
Ralstonia sp. UNC404CL21Col | 0.49 | ABZR87_RS08090 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.69 | ABZR87_RS01440 | | transketolase | — | — |
Variovorax sp. SCN45 | 0.49 | GFF5513 | | N5-carboxyaminoimidazole ribonucleotide synthase (EC 6.3.4.18) | 0.60 | GFF7176 | | Transketolase (EC 2.2.1.1) | — | — |
Ralstonia solanacearum GMI1000 | 0.49 | RS_RS02885 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | RS_RS13760 | | transketolase | — | — |
Ralstonia solanacearum PSI07 | 0.49 | RPSI07_RS21130 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | RPSI07_RS11430 | | transketolase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.49 | RALBFv3_RS12200 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | RALBFv3_RS05870 | | transketolase | — | — |
Ralstonia solanacearum UW163 | 0.49 | UW163_RS01410 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.68 | UW163_RS07755 | | transketolase | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.48 | GFF2770 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.62 | GFF2487 | | Transketolase (EC 2.2.1.1) | — | — |
Castellaniella sp019104865 MT123 | 0.48 | ABCV34_RS00565 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.66 | ABCV34_RS15450 | | transketolase | — | — |
Variovorax sp. OAS795 | 0.48 | ABID97_RS01700 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.59 | ABID97_RS02445 | | transketolase | — | — |
Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_675 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.63 | Ac3H11_649 | | Transketolase (EC 2.2.1.1) | — | — |
Dechlorosoma suillum PS | 0.42 | Dsui_0091 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.63 | Dsui_1561 | | transketolase | — | — |
Rhizobium sp. OAE497 | 0.35 | ABIE40_RS16070 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.44 | ABIE40_RS15865 | | transketolase | — | — |
Sinorhizobium meliloti 1021 | 0.35 | SMc04002 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.51 | SMc02342 | | transketolase | low | > 103 |
Azospirillum sp. SherDot2 | 0.34 | MPMX19_01418 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.58 | MPMX19_02942 | | Transketolase 1 | — | — |
Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS06140 | | phosphoribosylaminoimidazole carboxylase | 0.47 | AZOBR_RS09010 | | transketolase | — | — |
Agrobacterium fabrum C58 | 0.33 | Atu3755 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.44 | Atu3736 | | transketolase | — | — |
Rhodospirillum rubrum S1H | 0.33 | Rru_A1051 | | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | 0.54 | Rru_A2405 | | transketolase (NCBI) | low | > 58 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.32 | A4249_RS08935 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.43 | A4249_RS00780 | | transketolase | — | — |
Pseudomonas stutzeri RCH2 | 0.29 | Psest_4068 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.65 | Psest_0328 | | transketolase, bacterial and yeast | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.29 | Ga0059261_1428 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.46 | Ga0059261_0731 | | transketolase, bacterial and yeast | — | — |
Acinetobacter radioresistens SK82 | 0.29 | MPMX26_03050 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.60 | MPMX26_01775 | | Transketolase 1 | — | — |
Pseudomonas sp. RS175 | 0.29 | PFR28_04495 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.62 | PFR28_04188 | | Transketolase 1 | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_4081 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.62 | Pf6N2E2_4655 | | Transketolase (EC 2.2.1.1) | — | — |
Pseudomonas sp. S08-1 | 0.28 | OH686_13380 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.63 | OH686_10770 | | transketolase | — | — |
Pseudomonas putida KT2440 | 0.28 | PP_5335 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.63 | PP_4965 | | transketolase A | — | — |
Rhodopseudomonas palustris CGA009 | 0.28 | TX73_021645 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.48 | TX73_024110 | | transketolase | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_11075 | | phosphoribosylaminoimidazole carboxylase | 0.62 | AO356_13680 | | transketolase | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.28 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | PFLU_RS28095 | | transketolase | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_2028 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.62 | Pf1N1B4_2397 | | Transketolase (EC 2.2.1.1) | — | — |
Pseudomonas fluorescens SBW25 | 0.28 | PFLU_RS29800 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | PFLU_RS28095 | | transketolase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.27 | PfGW456L13_747 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.59 | PfGW456L13_1064 | | Transketolase (EC 2.2.1.1) | — | — |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | Psyr_4792 | | transketolase | — | — |
Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_5047 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | Psyr_4792 | | transketolase | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_09935 | | phosphoribosylaminoimidazole carboxylase | 0.62 | AO353_07955 | | transketolase | — | — |
Rhodanobacter sp. FW510-T8 | 0.27 | OKGIIK_03050 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.60 | OKGIIK_01095 | tkt | transketolase | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.27 | ABZR86_RS09830 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.61 | ABZR86_RS18655 | | transketolase | — | — |
Pseudomonas simiae WCS417 | 0.27 | PS417_28115 | | phosphoribosylaminoimidazole carboxylase | 0.62 | PS417_26440 | | transketolase | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.2012.1 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.59 | Xcc-8004.1180.1 | | Transketolase (EC 2.2.1.1) | — | — |
Lysobacter sp. OAE881 | 0.27 | ABIE51_RS15390 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.61 | ABIE51_RS17120 | | transketolase | — | — |
Rhodanobacter denitrificans MT42 | 0.26 | LRK55_RS13530 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.61 | LRK55_RS05505 | | transketolase | low | > 63 |
Marinobacter adhaerens HP15 | 0.26 | HP15_2350 | | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.61 | HP15_2913 | | bacterial transketolase | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.26 | LRK54_RS13815 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.62 | LRK54_RS05750 | | transketolase | — | — |
Alteromonas macleodii MIT1002 | 0.25 | MIT1002_00522 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.64 | MIT1002_00861 | | Transketolase 1 | — | — |
Synechococcus elongatus PCC 7942 | 0.24 | Synpcc7942_1428 | purK | phosphoribosylaminoimidazole carboxylase ATPase subunit | 0.47 | Synpcc7942_0538 | tktA | transketolase | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_00260 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | CSW01_17330 | | transketolase | low | > 62 |
Kangiella aquimarina DSM 16071 | 0.23 | B158DRAFT_0610 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.62 | B158DRAFT_0510 | | transketolase, bacterial and yeast | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.21 | GFF4438 | | Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) | 0.64 | GFF3028 | | Transketolase (EC 2.2.1.1) | low | > 78 |
Shewanella loihica PV-4 | 0.21 | Shew_1249 | | phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) | 0.64 | Shew_0752 | | transketolase (RefSeq) | — | — |
Klebsiella michiganensis M5al | 0.20 | BWI76_RS07065 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.64 | BWI76_RS24015 | | transketolase | — | — |
Rahnella sp. WP5 | 0.20 | EX31_RS22620 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | EX31_RS20285 | | transketolase | low | > 89 |
Serratia liquefaciens MT49 | 0.20 | IAI46_05370 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | IAI46_21045 | | transketolase | — | — |
Enterobacter asburiae PDN3 | 0.19 | EX28DRAFT_2460 | | phosphoribosylaminoimidazole carboxylase, PurK protein | 0.63 | EX28DRAFT_2974 | | transketolase, bacterial and yeast | — | — |
Pantoea sp. MT58 | 0.19 | IAI47_14355 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.64 | IAI47_03680 | | transketolase | low | > 76 |
Escherichia coli BW25113 | 0.19 | b0522 | purK | phosphoribosylaminoimidazole carboxylase (NCBI) | 0.65 | b2935 | tktA | transketolase 1, thiamin-binding (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 0.19 | HEPCGN_06480 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | HEPCGN_18630 | tkt | transketolase | low | > 87 |
Enterobacter sp. TBS_079 | 0.19 | MPMX20_01097 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.64 | MPMX20_03780 | | Transketolase 1 | low | > 85 |
Escherichia coli Nissle 1917 | 0.19 | ECOLIN_RS03025 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | ECOLIN_RS16330 | | transketolase | 0.54 | 14 |
Escherichia fergusonii Becca | 0.19 | EFB2_03540 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.65 | EFB2_00966 | | Transketolase 1 | low | > 86 |
Escherichia coli BL21 | 0.19 | ECD_00472 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.65 | ECD_02765 | | transketolase 1, thiamine triphosphate-binding | low | > 61 |
Escherichia coli ECOR27 | 0.19 | NOLOHH_00830 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | NOLOHH_11230 | tkt | transketolase | low | > 75 |
Escherichia coli ECRC102 | 0.19 | NIAGMN_05895 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | NIAGMN_17090 | tkt | transketolase | — | — |
Escherichia coli ECRC98 | 0.19 | JDDGAC_11490 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | JDDGAC_22955 | tkt | transketolase | low | > 86 |
Escherichia coli ECRC99 | 0.19 | KEDOAH_20130 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | KEDOAH_08815 | tkt | transketolase | — | — |
Escherichia coli ECRC62 | 0.19 | BNILDI_22260 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | BNILDI_09775 | tkt | transketolase | low | > 75 |
Escherichia coli ECRC101 | 0.19 | MCAODC_27060 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | MCAODC_09845 | tkt | transketolase | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.19 | OHPLBJKB_03159 | | N5-carboxyaminoimidazole ribonucleotide synthase | 0.65 | OHPLBJKB_00781 | | Transketolase 1 | — | — |
Escherichia coli ECRC100 | 0.19 | OKFHMN_07840 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.65 | OKFHMN_19325 | tkt | transketolase | — | — |
Dickeya dianthicola ME23 | 0.18 | DZA65_RS15995 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | DZA65_RS19585 | | transketolase | — | — |
Dickeya dianthicola 67-19 | 0.18 | HGI48_RS15190 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | HGI48_RS18450 | | transketolase | — | — |
Dickeya dadantii 3937 | 0.18 | DDA3937_RS15110 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.64 | DDA3937_RS18525 | | transketolase | — | — |
Pectobacterium carotovorum WPP14 | 0.18 | HER17_RS06470 | | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | HER17_RS02680 | | transketolase | low | > 75 |
Erwinia tracheiphila SCR3 | 0.18 | LU632_RS15250 | purK | 5-(carboxyamino)imidazole ribonucleotide synthase | 0.63 | LU632_RS05520 | tkt | transketolase | low | > 74 |
Shewanella amazonensis SB2B | 0.17 | Sama_1063 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.63 | Sama_2759 | | transketolase (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.16 | Shewana3_3156 | | phosphoribosylaminoimidazole carboxylase ATPase subunit (RefSeq) | 0.64 | Shewana3_3353 | | transketolase (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.15 | SO3555 | purK | phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI ptt file) | 0.64 | SO0930 | tkt | transketolase (NCBI ptt file) | — | — |
Not shown: 12 genomes with orthologs for BPHYT_RS16245 only; 6 genomes with orthologs for BPHYT_RS16840 only