| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | 1.0 | BPHYT_RS14895 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.57 | 3 |
| Paraburkholderia graminis OAS925 | 0.97 | ABIE53_000061 | | methylenetetrahydrofolate reductase (NADPH) | 0.91 | ABIE53_003154 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.96 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | 0.95 | H281DRAFT_03922 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.92 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.90 | QEN71_RS04085 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.83 | 45 |
| Ralstonia solanacearum GMI1000 | 0.80 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.69 | RS_RS04510 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.63 | 15 |
| Cupriavidus basilensis FW507-4G11 | 0.80 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | 0.67 | RR42_RS04475 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.83 | 5 |
| Ralstonia solanacearum IBSBF1503 | 0.79 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.69 | RALBFv3_RS13775 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.79 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.69 | UW163_RS16035 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Ralstonia solanacearum PSI07 | 0.79 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.69 | RPSI07_RS19695 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.79 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.70 | ABZR87_RS09465 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.78 | 5 |
| Herbaspirillum seropedicae SmR1 | 0.71 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | 0.62 | HSERO_RS18420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.27 | 59 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS28165 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | PFLU_RS13540 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_26510 | | 5,10-methylenetetrahydrofolate reductase | 0.21 | PS417_12855 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.45 | 14 |
| Rhodanobacter denitrificans MT42 | 0.59 | LRK55_RS11765 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.17 | LRK55_RS00130 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.59 | LRK54_RS12030 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.16 | LRK54_RS00390 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Lysobacter sp. OAE881 | 0.58 | ABIE51_RS16490 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.18 | ABIE51_RS12135 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.58 | OKGIIK_11830 | metF | methylenetetrahydrofolate reductase [NAD(P)H] | 0.17 | OKGIIK_06920 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.58 | ABZR86_RS11570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.18 | ABZR86_RS02230 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.92 | 55 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.25 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | 0.25 | Psyr_0888 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.57 | Xcc-8004.4336.1 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.15 | Xcc-8004.3281.1 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | low | > 74 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_24530 | | methylenetetrahydrofolate reductase | 0.54 | IAI46_08640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.72 | 32 |
| Rahnella sp. WP5 | 0.43 | EX31_RS14205 | | methylenetetrahydrofolate reductase | 0.56 | EX31_RS18250 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.55 | MPMX20_01567 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.68 | 45 |
| Pectobacterium carotovorum WPP14 | 0.42 | HER17_RS00950 | | methylenetetrahydrofolate reductase | 0.52 | HER17_RS12285 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.42 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | 0.54 | HGI48_RS09685 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dickeya dianthicola ME23 | 0.42 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.54 | DZA65_RS09995 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Dickeya dadantii 3937 | 0.42 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | 0.55 | DDA3937_RS09675 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | BWI76_RS09760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.80 | 47 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.54 | EX28DRAFT_2027 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | low | > 76 |
| Pantoea sp. MT58 | 0.42 | IAI47_00890 | | methylenetetrahydrofolate reductase | 0.54 | IAI47_12860 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | 0.54 | NOLOHH_22045 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.89 | 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | OHPLBJKB_02760 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 73 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | 0.54 | KEDOAH_22250 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia coli ECOR38 | 0.42 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | 0.54 | HEPCGN_23035 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.93 | 36 |
| Escherichia coli ECRC100 | 0.42 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | 0.54 | OKFHMN_05485 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.98 | 20 |
| Escherichia coli BL21 | 0.42 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | 0.54 | ECD_00912 | | 5-enolpyruvylshikimate-3-phosphate synthetase | 0.77 | 49 |
| Escherichia coli ECRC62 | 0.42 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | 0.54 | BNILDI_20300 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.97 | 33 |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | 0.54 | NIAGMN_03205 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | 0.54 | JDDGAC_09095 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.95 | 16 |
| Escherichia coli ECRC101 | 0.42 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | 0.54 | MCAODC_24875 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.92 | 32 |
| Escherichia coli BW25113 | 0.42 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.54 | b0908 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | 0.93 | 33 |
| Escherichia fergusonii Becca | 0.41 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | 0.55 | EFB2_03156 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | 0.55 | GFF3665 | | 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) | low | > 78 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | 0.55 | ECOLIN_RS04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase | 0.83 | 32 |
| Erwinia tracheiphila SCR3 | 0.41 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | 0.51 | LU632_RS09795 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 74 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | 0.14 | AZOBR_RS03090 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Magnetospirillum magneticum AMB-1 | 0.40 | AMB_RS02230 | | methylenetetrahydrofolate reductase | 0.15 | AMB_RS21555 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodospirillum rubrum S1H | 0.39 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.12 | Rru_A0295 | | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | 0.13 | MPMX19_02233 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.39 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.14 | Ga0059261_0167 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | — | — |
| Bosea sp. OAE506 | 0.38 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.14 | ABIE41_RS03910 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.38 | CSW01_13560 | | methylenetetrahydrofolate reductase | 0.58 | CSW01_08705 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 62 |
| Shewanella amazonensis SB2B | 0.38 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.56 | Sama_1734 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.38 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.56 | Shew_1952 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.37 | MIT1002_03670 | | 5,10-methylenetetrahydrofolate reductase | 0.53 | MIT1002_02191 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.56 | Shewana3_1975 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | 0.94 | 26 |
| Shewanella oneidensis MR-1 | 0.36 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.56 | SO2404 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) | 0.84 | 71 |
| Kangiella aquimarina DSM 16071 | 0.36 | B158DRAFT_2461 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) (EC 1.5.1.20) | 0.21 | B158DRAFT_2432 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) | low | > 40 |
| Caulobacter crescentus NA1000 Δfur | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.15 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.36 | CCNA_02224 | | methylenetetrahydrofolate reductase | 0.15 | CCNA_03704 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhizobium sp. OAE497 | 0.35 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.24 | ABIE40_RS05420 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Phaeobacter inhibens DSM 17395 | 0.35 | PGA1_c11700 | | 5,10-methylenetetrahydrofolate reductase MetF | 0.13 | PGA1_c04810 | | 3-phosphoshikimate 1-carboxyvinyltransferase AroA | — | — |
| Agrobacterium fabrum C58 | 0.35 | Atu2123 | | methylenetetrahydrofolate reductase | 0.22 | Atu0642 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.35 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.16 | A4249_RS10920 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.35 | DVU0997 | metF | 5,10-methylenetetrahydrofolate reductase (TIGR) | 0.27 | DVU0463 | aroA | 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR) | — | — |
| Sinorhizobium meliloti 1021 | 0.34 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | 0.17 | SMc00333 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.34 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.14 | TX73_000320 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.33 | DvMF_3034 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.31 | DvMF_1748 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.30 | Dshi_2080 | | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.14 | Dshi_1022 | | 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) | — | — |
| Fusobacterium nucleatum SB010 | 0.30 | HUW76_02285 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | HUW76_05445 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 35 |
| Bifidobacterium breve UCC2003 | 0.27 | BBR_RS15410 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.17 | BBR_RS14370 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 34 |
| Phocaeicola dorei CL03T12C01 | 0.25 | ABI39_RS15570 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.27 | ABI39_RS09575 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 72 |
| Phocaeicola vulgatus CL09T03C04 | 0.24 | HMPREF1058_RS01490 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.27 | HMPREF1058_RS13970 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 67 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.24 | Echvi_3637 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.25 | Echvi_0122 | | 5-enolpyruvylshikimate-3-phosphate synthase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.22 | CA265_RS23445 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.24 | CA265_RS11640 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.21 | CA264_16780 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.21 | CA264_13100 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 74 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.21 | BT3821 | | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.28 | BT2186 | | 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) | — | — |
| Bacteroides stercoris CC31F | 0.20 | HMPREF1181_RS00120 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.26 | HMPREF1181_RS09330 | | 3-phosphoshikimate 1-carboxyvinyltransferase | low | > 56 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.20 | ABZR88_RS20935 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.25 | ABZR88_RS07000 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.20 | HMPREF1078_RS07860 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.26 | HMPREF1078_RS05635 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
| Bacteroides ovatus ATCC 8483 | 0.17 | BACOVA_03666 | | methylenetetrahydrofolate reductase (NAD(P)H) | 0.28 | BACOVA_03157 | | 3-phosphoshikimate 1-carboxyvinyltransferase | — | — |
Not shown: 17 genomes with orthologs for BPHYT_RS18705 only; 4 genomes with orthologs for BPHYT_RS14895 only