Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS14895 in Burkholderia phytofirmans PsJN

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS14895 3-phosphoshikimate 1-carboxyvinyltransferase 0.75 12
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.95 H281DRAFT_03922 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.91 ABIE53_003154 3-phosphoshikimate 1-carboxyvinyltransferase — —
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.90 QEN71_RS04085 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.69 RS_RS04510 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.69 RALBFv3_RS13775 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.69 UW163_RS16035 3-phosphoshikimate 1-carboxyvinyltransferase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.70 ABZR87_RS09465 3-phosphoshikimate 1-carboxyvinyltransferase 0.58 8
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.69 RPSI07_RS19695 3-phosphoshikimate 1-carboxyvinyltransferase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS04915 cysteine synthase 0.62 HSERO_RS18420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.67 RR42_RS04475 3-phosphoshikimate 1-carboxyvinyltransferase 0.76 10
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.21 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase 0.73 19
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.21 PFLU_RS13540 3-phosphoshikimate 1-carboxyvinyltransferase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.25 Psyr_0888 3-phosphoshikimate 1-carboxyvinyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.58 CSW01_08705 3-phosphoshikimate 1-carboxyvinyltransferase low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.55 GFF3665 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 78
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.54 BWI76_RS09760 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.56 EX31_RS18250 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.54 HEPCGN_23035 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.54 b0908 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.55 EFB2_03156 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.55 ECOLIN_RS04810 3-phosphoshikimate 1-carboxyvinyltransferase — —
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.54 EX28DRAFT_2027 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.55 MPMX20_01567 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.54 NOLOHH_22045 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.54 BNILDI_20300 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.54 OHPLBJKB_02760 3-phosphoshikimate 1-carboxyvinyltransferase low > 73
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.54 ECD_00912 5-enolpyruvylshikimate-3-phosphate synthetase low > 61
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.55 DDA3937_RS09675 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.54 DZA65_RS09995 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.56 Shewana3_1975 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 73
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.54 MCAODC_24875 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.54 NIAGMN_03205 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.54 OKFHMN_05485 aroA 3-phosphoshikimate 1-carboxyvinyltransferase 0.59 53
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.54 JDDGAC_09095 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.54 KEDOAH_22250 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.56 SO2404 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.54 HGI48_RS09685 3-phosphoshikimate 1-carboxyvinyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08940 cysteine synthase B 0.21 CA264_13100 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.52 HER17_RS12285 3-phosphoshikimate 1-carboxyvinyltransferase low > 75
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0220 cysteine synthase B 0.25 Echvi_0122 5-enolpyruvylshikimate-3-phosphate synthase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.51 LU632_RS09795 aroA 3-phosphoshikimate 1-carboxyvinyltransferase low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS10150 cysteine synthase B 0.24 CA265_RS11640 3-phosphoshikimate 1-carboxyvinyltransferase — —
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.54 IAI46_08640 3-phosphoshikimate 1-carboxyvinyltransferase low > 86
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.54 IAI47_12860 3-phosphoshikimate 1-carboxyvinyltransferase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.54 ABZR88_RS13695 cysteine synthase CysM 0.25 ABZR88_RS07000 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1852 cysteine synthase A (NCBI ptt file) 0.28 BT2186 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) (from data) — —
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU0663 cysK cysteine synthase A (TIGR) 0.27 DVU0463 aroA 3-phosphoshikimate 1-carboxyvinyltransferase (TIGR) — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.26 HMPREF1078_RS05635 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04596 cysteine synthase A 0.28 BACOVA_03157 3-phosphoshikimate 1-carboxyvinyltransferase — —
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.26 HMPREF1181_RS09330 3-phosphoshikimate 1-carboxyvinyltransferase low > 56
Bosea sp. OAE506 0.36 ABIE41_RS03545 cysteine synthase A 0.14 ABIE41_RS03910 3-phosphoshikimate 1-carboxyvinyltransferase — —
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02875 cysteine synthase A 0.27 HMPREF1058_RS13970 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02185 cysteine synthase A 0.27 ABI39_RS09575 3-phosphoshikimate 1-carboxyvinyltransferase low > 72
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.15 Xcc-8004.3281.1 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.36 A4249_RS10255 cysteine synthase A 0.16 A4249_RS10920 3-phosphoshikimate 1-carboxyvinyltransferase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.18 ABIE51_RS12135 3-phosphoshikimate 1-carboxyvinyltransferase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A) 0.16 Rv3227 3-phosphoshikimate 1-carboxyvinyltransferase AroA (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) — —
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_B2664 srpG cysteine synthase 0.15 Synpcc7942_0232 aroA 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00905 cysteine synthase A 0.16 LRK54_RS00390 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00680 cysteine synthase A 0.17 LRK55_RS00130 3-phosphoshikimate 1-carboxyvinyltransferase low > 63
Rhodospirillum rubrum S1H 0.34 Rru_A3794 Cysteine synthase (NCBI) 0.12 Rru_A0295 3-phosphoshikimate 1-carboxyvinyltransferase (NCBI) — —
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_2658 cysteine synthase (RefSeq) 0.31 DvMF_1748 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Sinorhizobium meliloti 1021 0.33 SMc00421 O-acetylserine sulfhydrylase A 0.17 SMc00333 3-phosphoshikimate 1-carboxyvinyltransferase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS01415 cysteine synthase A 0.24 ABIE40_RS05420 3-phosphoshikimate 1-carboxyvinyltransferase — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS01005 cysteine synthase A 0.15 AMB_RS21555 3-phosphoshikimate 1-carboxyvinyltransferase — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.21 B158DRAFT_2432 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) low > 40
Azospirillum brasilense Sp245 0.31 AZOBR_RS01080 cysteine synthase 0.14 AZOBR_RS03090 3-phosphoshikimate 1-carboxyvinyltransferase — —
Agrobacterium fabrum C58 0.31 Atu0312 cysteine synthase 0.22 Atu0642 3-phosphoshikimate 1-carboxyvinyltransferase — —
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.53 MIT1002_02191 3-phosphoshikimate 1-carboxyvinyltransferase — —
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.56 Shew_1952 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.30 Sama_1508 cysteine synthase A (RefSeq) 0.56 Sama_1734 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) low > 62
Caulobacter crescentus NA1000 0.30 CCNA_03740 cysteine synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_03740 cysteine synthase 0.15 CCNA_03704 3-phosphoshikimate 1-carboxyvinyltransferase low > 67
Azospirillum sp. SherDot2 0.30 MPMX19_00237 Cysteine synthase 0.13 MPMX19_02233 3-phosphoshikimate 1-carboxyvinyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_3644 cysteine synthase A 0.14 Ga0059261_0167 3-phosphoshikimate 1-carboxyvinyltransferase (EC 2.5.1.19) — —
Bifidobacterium breve UCC2003 0.29 BBR_RS13140 cysteine synthase 0.17 BBR_RS14370 3-phosphoshikimate 1-carboxyvinyltransferase low > 34
Fusobacterium nucleatum SB010 0.27 HUW76_04155 cysteine synthase A 0.21 HUW76_05445 3-phosphoshikimate 1-carboxyvinyltransferase — —
Dinoroseobacter shibae DFL-12 0.25 Dshi_0891 cysteine synthase A (RefSeq) 0.14 Dshi_1022 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.25 PGA1_c13950 cysteine synthase CysK 0.13 PGA1_c04810 3-phosphoshikimate 1-carboxyvinyltransferase AroA — —

Not shown: 17 genomes with orthologs for BPHYT_RS14845 only; 5 genomes with orthologs for BPHYT_RS14895 only