Conservation of cofitness between BPHYT_RS17525 and BPHYT_RS13645 in Burkholderia phytofirmans PsJN

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS17525 glutaredoxin 1.0 BPHYT_RS13645 threonine--tRNA ligase 0.38 15
Paraburkholderia graminis OAS925 0.97 ABIE53_003665 monothiol glutaredoxin 0.84 ABIE53_002904 threonyl-tRNA synthetase
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_05690 monothiol glutaredoxin 0.99 H281DRAFT_04501 Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase
Paraburkholderia sabiae LMG 24235 0.90 QEN71_RS27680 Grx4 family monothiol glutaredoxin 0.98 QEN71_RS05275 threonine--tRNA ligase
Ralstonia solanacearum UW163 0.81 UW163_RS07025 monothiol glutaredoxin, Grx4 family 0.79 UW163_RS15105 threonine--tRNA ligase
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS06600 monothiol glutaredoxin, Grx4 family 0.79 RALBFv3_RS01795 threonine--tRNA ligase
Ralstonia solanacearum PSI07 0.81 RPSI07_RS10625 monothiol glutaredoxin, Grx4 family 0.79 RPSI07_RS15695 threonine--tRNA ligase
Ralstonia solanacearum GMI1000 0.81 RS_RS14550 monothiol glutaredoxin, Grx4 family 0.78 RS_RS07940 threonine--tRNA ligase
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS02265 Grx4 family monothiol glutaredoxin 0.71 ABZR87_RS13735 threonine--tRNA ligase
Acidovorax sp. GW101-3H11 0.78 Ac3H11_4778 Glutaredoxin-related protein 0.69 Ac3H11_2830 Threonyl-tRNA synthetase (EC 6.1.1.3)
Variovorax sp. SCN45 0.77 GFF2522 Glutaredoxin-related protein 0.65 GFF4832 Threonyl-tRNA synthetase (EC 6.1.1.3)
Variovorax sp. OAS795 0.77 ABID97_RS07180 Grx4 family monothiol glutaredoxin 0.66 ABID97_RS11120 threonine--tRNA ligase
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS18485 glutaredoxin 0.81 RR42_RS06600 threonyl-tRNA synthetase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF1268 Glutaredoxin-related protein 0.72 GFF4197 Threonyl-tRNA synthetase (EC 6.1.1.3)
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS19865 glutaredoxin 0.78 HSERO_RS09880 threonyl-tRNA synthetase
Dechlorosoma suillum PS 0.70 Dsui_0118 monothiol glutaredoxin, Grx4 family 0.74 Dsui_1958 threonyl-tRNA synthetase
Castellaniella sp019104865 MT123 0.69 ABCV34_RS14065 Grx4 family monothiol glutaredoxin 0.70 ABCV34_RS04805 threonine--tRNA ligase
Sphingomonas koreensis DSMZ 15582 0.68 Ga0059261_0058 monothiol glutaredoxin, Grx4 family 0.54 Ga0059261_2729 threonyl-tRNA synthetase (EC 6.1.1.3)
Bosea sp. OAE506 0.64 ABIE41_RS08625 Grx4 family monothiol glutaredoxin 0.53 ABIE41_RS14085 threonine--tRNA ligase
Lysobacter sp. OAE881 0.63 ABIE51_RS15380 Grx4 family monothiol glutaredoxin 0.69 ABIE51_RS15270 threonine--tRNA ligase
Rhodospirillum rubrum S1H 0.62 Rru_A0705 Glutaredoxin-related protein (NCBI) 0.63 Rru_A3487 Threonyl-tRNA synthetase, class IIa (NCBI)
Xanthomonas campestris pv. campestris strain 8004 0.61 Xcc-8004.2014.1 Glutaredoxin-related protein 0.66 Xcc-8004.2067.1 Threonyl-tRNA synthetase (EC 6.1.1.3)
Dinoroseobacter shibae DFL-12 0.61 Dshi_1710 glutaredoxin-like protein (RefSeq) 0.54 Dshi_0777 threonyl-tRNA synthetase (RefSeq)
Rhodopseudomonas palustris CGA009 0.60 TX73_008250 Grx4 family monothiol glutaredoxin 0.55 TX73_017610 threonine--tRNA ligase
Agrobacterium fabrum C58 0.60 Atu1854 glutaredoxin-related protein 0.55 Atu1746 threonyl-tRNA synthetase
Sinorhizobium meliloti 1021 0.60 SMc00538 hypothetical protein 0.54 SMc01010 threonyl-tRNA synthetase
Azospirillum sp. SherDot2 0.60 MPMX19_00477 Glutaredoxin 4 0.61 MPMX19_02081 Threonine--tRNA ligase
Azospirillum brasilense Sp245 0.59 AZOBR_RS04325 glutaredoxin 0.61 AZOBR_RS13510 threonyl-tRNA synthetase
Magnetospirillum magneticum AMB-1 0.58 AMB_RS10680 monothiol glutaredoxin, Grx4 family 0.62 AMB_RS01720 threonine--tRNA ligase
Synechococcus elongatus PCC 7942 0.58 Synpcc7942_1145 Glutaredoxin-related protein 0.38 Synpcc7942_2606 thrS threonyl-tRNA synthetase
Phaeobacter inhibens DSM 17395 0.55 PGA1_c17180 putative glutaredoxin 0.55 PGA1_c20990 threonyl-tRNA synthetase ThrS
Marinobacter adhaerens HP15 0.53 HP15_751 monothiol glutaredoxin 0.66 HP15_1071 threonyl-tRNA synthetase
Caulobacter crescentus NA1000 0.53 CCNA_02591 glutaredoxin 0.56 CCNA_00496 threonyl-tRNA synthetase
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_02591 glutaredoxin 0.56 CCNA_00496 threonyl-tRNA synthetase
Pseudomonas sp. S08-1 0.52 OH686_20435 monothiol glutaredoxin, Grx4 family 0.65 OH686_22840 threonine--tRNA ligase
Acinetobacter radioresistens SK82 0.51 MPMX26_01058 Glutaredoxin 4 0.62 MPMX26_00553 Threonine--tRNA ligase
Enterobacter sp. TBS_079 0.51 MPMX20_01983 Glutaredoxin 4 0.61 MPMX20_01895 Threonine--tRNA ligase
Enterobacter asburiae PDN3 0.51 EX28DRAFT_1651 monothiol glutaredoxin, Grx4 family 0.60 EX28DRAFT_1726 threonyl-tRNA synthetase (EC 6.1.1.3)
Klebsiella michiganensis M5al 0.51 BWI76_RS16490 glutaredoxin 0.60 BWI76_RS17150 threonine--tRNA ligase
Pseudomonas putida KT2440 0.51 PP_1081 monothiol glutaredoxin 4 0.66 PP_2465 Threonine--tRNA ligase
Escherichia coli BL21 0.51 ECD_01624 glutaredoxin-4 0.60 ECD_01688 threonyl-tRNA synthetase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF3621 Glutaredoxin-related protein 0.61 GFF3522 Threonyl-tRNA synthetase (EC 6.1.1.3)
Escherichia coli ECOR27 0.51 NOLOHH_17935 grxD monothiol glutaredoxin 4 0.60 NOLOHH_17575 thrS threonine--tRNA ligase
Escherichia coli ECRC62 0.51 BNILDI_16725 grxD monothiol glutaredoxin 4 0.60 BNILDI_16370 thrS threonine--tRNA ligase
Escherichia coli Nissle 1917 0.51 ECOLIN_RS09220 monothiol glutaredoxin 4 0.60 ECOLIN_RS09600 threonine--tRNA ligase
Escherichia coli ECRC102 0.51 NIAGMN_00650 grxD monothiol glutaredoxin 4 0.60 NIAGMN_01010 thrS threonine--tRNA ligase
Rahnella sp. WP5 0.51 EX31_RS13820 Grx4 family monothiol glutaredoxin 0.59 EX31_RS14075 threonine--tRNA ligase
Escherichia coli BW25113 0.51 b1654 ydhD hypothetical protein (NCBI) 0.60 b1719 thrS threonyl-tRNA synthetase (NCBI)
Pseudomonas stutzeri RCH2 0.51 Psest_1292 monothiol glutaredoxin, Grx4 family 0.65 Psest_1968 threonyl-tRNA synthetase
Escherichia coli ECRC100 0.51 OKFHMN_27415 grxD monothiol glutaredoxin 4 0.60 OKFHMN_27055 thrS threonine--tRNA ligase
Escherichia coli ECOR38 0.51 HEPCGN_05800 grxD monothiol glutaredoxin 4 0.60 HEPCGN_05420 thrS threonine--tRNA ligase
Escherichia fergusonii Becca 0.51 EFB2_02339 Glutaredoxin 4 0.60 EFB2_02273 Threonine--tRNA ligase
Erwinia tracheiphila SCR3 0.51 LU632_RS11215 Grx4 family monothiol glutaredoxin 0.59 LU632_RS10890 thrS threonine--tRNA ligase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_02071 Glutaredoxin 4 0.60 OHPLBJKB_02015 Threonine--tRNA ligase
Escherichia coli ECRC99 0.51 KEDOAH_00695 grxD monothiol glutaredoxin 4 0.60 KEDOAH_01055 thrS threonine--tRNA ligase
Escherichia coli ECRC101 0.51 MCAODC_17995 grxD monothiol glutaredoxin 4 0.60 MCAODC_18355 thrS threonine--tRNA ligase
Escherichia coli ECRC98 0.51 JDDGAC_02005 grxD monothiol glutaredoxin 4 0.60 JDDGAC_01630 thrS threonine--tRNA ligase
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1228 monothiol glutaredoxin, Grx4 family 0.64 B158DRAFT_1255 threonyl-tRNA synthetase (EC 6.1.1.3)
Serratia liquefaciens MT49 0.50 IAI46_11260 Grx4 family monothiol glutaredoxin 0.60 IAI46_10955 threonine--tRNA ligase
Dickeya dadantii 3937 0.50 DDA3937_RS12610 Grx4 family monothiol glutaredoxin 0.60 DDA3937_RS11435 threonine--tRNA ligase
Dickeya dianthicola 67-19 0.49 HGI48_RS12670 Grx4 family monothiol glutaredoxin 0.60 HGI48_RS11480 threonine--tRNA ligase
Pantoea sp. MT58 0.49 IAI47_10780 Grx4 family monothiol glutaredoxin 0.61 IAI47_10985 threonine--tRNA ligase
Shewanella loihica PV-4 0.49 Shew_1835 glutaredoxin-like protein (RefSeq) 0.60 Shew_2032 threonyl-tRNA synthetase (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.49 CSW01_10225 monothiol glutaredoxin, Grx4 family 0.60 CSW01_15385 threonine--tRNA ligase
Dickeya dianthicola ME23 0.49 DZA65_RS13125 Grx4 family monothiol glutaredoxin 0.60 DZA65_RS11820 threonine--tRNA ligase
Shewanella sp. ANA-3 0.49 Shewana3_1640 glutaredoxin-like protein (RefSeq) 0.61 Shewana3_2043 threonyl-tRNA synthetase (RefSeq)
Shewanella oneidensis MR-1 0.48 SO2880 glutaredoxin domain protein (NCBI ptt file) 0.61 SO2299 thrS threonyl-tRNA synthetase (NCBI ptt file)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3898 Glutaredoxin-related protein 0.66 Psyr_2162 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3898 Glutaredoxin-related protein 0.66 Psyr_2162 Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
Alteromonas macleodii MIT1002 0.48 MIT1002_01235 Monothiol glutaredoxin 0.60 MIT1002_01603 Threonine--tRNA ligase
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1742 Glutaredoxin-related protein 0.66 PfGW456L13_3900 Threonyl-tRNA synthetase (EC 6.1.1.3)
Pectobacterium carotovorum WPP14 0.48 HER17_RS09250 Grx4 family monothiol glutaredoxin 0.60 HER17_RS11520 threonine--tRNA ligase
Pseudomonas fluorescens SBW25 0.47 PFLU_RS05690 Grx4 family monothiol glutaredoxin 0.65 PFLU_RS20320 threonine--tRNA ligase
Pseudomonas simiae WCS417 0.47 PS417_05605 glutaredoxin 0.65 PS417_18345 threonyl-tRNA synthetase
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_759 Glutaredoxin-related protein 0.66 Pf1N1B4_6023 Threonyl-tRNA synthetase (EC 6.1.1.3)
Pseudomonas sp. RS175 0.47 PFR28_03360 Glutaredoxin 4 0.65 PFR28_02725 Threonine--tRNA ligase
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_18290 glutaredoxin 0.65 AO356_00910 threonine--tRNA ligase
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS05690 Grx4 family monothiol glutaredoxin 0.65 PFLU_RS20320 threonine--tRNA ligase
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5582 Glutaredoxin-related protein 0.66 Pf6N2E2_173 Threonyl-tRNA synthetase (EC 6.1.1.3)
Shewanella amazonensis SB2B 0.47 Sama_1919 glutaredoxin-related protein (RefSeq) 0.60 Sama_1765 threonyl-tRNA synthetase (RefSeq)
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_04140 glutaredoxin 0.67 AO353_20875 threonine--tRNA ligase

Not shown: 0 genomes with orthologs for BPHYT_RS17525 only; 21 genomes with orthologs for BPHYT_RS13645 only