Conservation of cofitness between B158DRAFT_2018 and B158DRAFT_1951 in Kangiella aquimarina DSM 16071

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2018 tRNA dihydrouridine synthase A 1.0 B158DRAFT_1951 tRNA dimethylallyltransferase 0.42 1
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA 0.59 CSW01_01830 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 62
Shewanella oneidensis MR-1 0.63 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) 0.56 SO0602 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.63 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) 0.56 Shewana3_0596 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Shewanella amazonensis SB2B 0.62 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) 0.55 Sama_3026 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Pantoea sp. MT58 0.61 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA 0.56 IAI47_02585 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Escherichia coli ECRC62 0.61 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 BNILDI_06965 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase 0.58 OHPLBJKB_03871 tRNA dimethylallyltransferase — —
Escherichia coli ECOR38 0.61 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 HEPCGN_10490 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Escherichia coli ECRC100 0.61 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 OKFHMN_12260 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Escherichia coli ECRC102 0.61 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 NIAGMN_10110 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECRC99 0.61 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 KEDOAH_15895 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli ECOR27 0.61 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 NOLOHH_04525 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA 0.58 ECOLIN_RS24225 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 55
Dickeya dadantii 3937 0.61 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA 0.55 DDA3937_RS18615 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Escherichia coli ECRC98 0.61 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 JDDGAC_15900 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Escherichia coli BW25113 0.60 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) 0.58 b4171 miaA tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) low > 76
Dickeya dianthicola ME23 0.60 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA 0.55 DZA65_RS19685 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Escherichia fergusonii Becca 0.60 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase 0.58 EFB2_04364 tRNA dimethylallyltransferase low > 86
Escherichia coli BL21 0.60 ECD_03921 tRNA-dihydrouridine synthase A 0.58 ECD_04038 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) 0.55 GFF824 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 78
Enterobacter sp. TBS_079 0.60 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase 0.57 MPMX20_00452 tRNA dimethylallyltransferase 0.23 33
Shewanella loihica PV-4 0.60 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) 0.55 Shew_0565 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) 0.39 18
Enterobacter asburiae PDN3 0.60 EX28DRAFT_4263 tRNA dihydrouridine synthase A 0.57 EX28DRAFT_3368 tRNA dimethylallyltransferase low > 76
Escherichia coli ECRC101 0.60 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.58 MCAODC_02775 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 87
Pectobacterium carotovorum WPP14 0.60 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA 0.56 HER17_RS02580 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 75
Serratia liquefaciens MT49 0.60 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA 0.56 IAI46_01620 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Dickeya dianthicola 67-19 0.60 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA 0.55 HGI48_RS18550 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 71
Rahnella sp. WP5 0.59 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA 0.55 EX31_RS08825 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 89
Klebsiella michiganensis M5al 0.59 BWI76_RS01900 tRNA-dihydrouridine synthase A 0.58 BWI76_RS02530 tRNA dimethylallyltransferase low > 92
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS22650 tRNA dihydrouridine(20/20a) synthase DusA 0.46 QEN71_RS26440 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Azospirillum brasilense Sp245 0.56 AZOBR_RS15935 tRNA-dihydrouridine synthase A 0.28 AZOBR_RS06550 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Acinetobacter radioresistens SK82 0.56 MPMX26_00482 tRNA-dihydrouridine(20/20a) synthase 0.41 MPMX26_01208 tRNA dimethylallyltransferase — —
Alteromonas macleodii MIT1002 0.56 MIT1002_03387 putative tRNA-dihydrouridine synthase 0.51 MIT1002_03789 tRNA dimethylallyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_00295 tRNA-dihydrouridine synthase A 0.55 AO353_13140 tRNA dimethylallyltransferase low > 101
Azospirillum sp. SherDot2 0.56 MPMX19_00670 tRNA-dihydrouridine(20/20a) synthase 0.28 MPMX19_01778 tRNA dimethylallyltransferase — —
Paraburkholderia graminis OAS925 0.55 ABIE53_001975 tRNA-dihydrouridine synthase A 0.46 ABIE53_000875 tRNA dimethylallyltransferase low > 113
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS18350 tRNA dihydrouridine(20/20a) synthase DusA 0.48 ABZR86_RS08370 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS08700 tRNA-dihydrouridine synthase A 0.45 BPHYT_RS03645 tRNA dimethylallyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_00766 tRNA-U16,U17-dihydrouridine synthase 0.45 H281DRAFT_04711 tRNA dimethylallyltransferase — —
Ralstonia solanacearum PSI07 0.55 RPSI07_RS17630 tRNA dihydrouridine(20/20a) synthase DusA 0.46 RPSI07_RS12065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 81
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_57 tRNA dihydrouridine synthase A 0.56 Pf1N1B4_1413 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Erwinia tracheiphila SCR3 0.55 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.53 LU632_RS02050 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 74
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS15730 tRNA dihydrouridine(20/20a) synthase DusA 0.47 RALBFv3_RS05235 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS13175 tRNA dihydrouridine(20/20a) synthase DusA 0.47 UW163_RS08390 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Synechococcus elongatus PCC 7942 0.54 Synpcc7942_2066 tRNA-dihydrouridine synthase A 0.33 Synpcc7942_2490 miaA tRNA delta(2)-isopentenylpyrophosphate transferase low > 38
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_2257 tRNA dihydrouridine synthase A 0.56 Pf6N2E2_3615 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS11300 tRNA dihydrouridine(20/20a) synthase DusA 0.48 ABZR87_RS00875 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Cupriavidus basilensis FW507-4G11 0.54 RR42_RS12665 tRNA-dihydrouridine synthase A 0.43 RR42_RS17210 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS17905 tRNA-dihydrouridine synthase A 0.47 HSERO_RS04185 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.54 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.54 PFLU_RS02565 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 109
Pseudomonas simiae WCS417 0.54 PS417_07740 tRNA-dihydrouridine synthase A 0.53 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase 0.20 30
Pseudomonas putida KT2440 0.54 PP_2169 tRNA-dihydrouridine synthase A 0.56 PP_4895 tRNA dimethylallyltransferase low > 96
Rhodospirillum rubrum S1H 0.54 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) 0.23 Rru_A0466 tRNA isopentenyltransferase (NCBI) — —
Ralstonia solanacearum GMI1000 0.54 RS_RS06510 tRNA dihydrouridine(20/20a) synthase DusA 0.47 RS_RS12855 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 80
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01364 NIFR3-like protein 0.29 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Caulobacter crescentus NA1000 0.54 CCNA_01364 NIFR3-like protein 0.29 CCNA_02183 tRNA delta(2)-isopentenylpyrophosphate transferase — —
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.55 Psyr_0571 tRNA isopentenyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_02170 tRNA-dihydrouridine synthase A 0.56 AO356_08660 tRNA dimethylallyltransferase low > 104
Pseudomonas sp. RS175 0.54 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase 0.56 PFR28_05120 tRNA dimethylallyltransferase low > 88
Pseudomonas sp. S08-1 0.54 OH686_22745 tRNA-dihydrouridine(20/20a) synthase 0.55 OH686_09475 tRNA dimethylallyltransferase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.55 Psyr_0571 tRNA isopentenyltransferase low > 86
Variovorax sp. OAS795 0.53 ABID97_RS13915 tRNA dihydrouridine(20/20a) synthase DusA 0.41 ABID97_RS20320 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_00625 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.49 OKGIIK_06625 miaA tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.5010.1 tRNA dihydrouridine synthase A 0.44 Xcc-8004.3121.1 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Lysobacter sp. OAE881 0.52 ABIE51_RS03925 tRNA dihydrouridine(20/20a) synthase DusA 0.46 ABIE51_RS06535 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 62
Pseudomonas stutzeri RCH2 0.52 Psest_2706 tRNA dihydrouridine synthase A 0.57 Psest_0682 tRNA dimethylallyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05995 tRNA dihydrouridine(20/20a) synthase DusA 0.49 LRK54_RS00635 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 59
Variovorax sp. SCN45 0.51 GFF928 tRNA-dihydrouridine(20/20a) synthase (EC 1.3.1.91) 0.42 GFF4798 tRNA dimethylallyltransferase (EC 2.5.1.75) — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS05750 tRNA dihydrouridine(20/20a) synthase DusA 0.49 LRK55_RS00405 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2288 tRNA dihydrouridine synthase A 0.42 Ac3H11_319 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 79
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_3987 tRNA dihydrouridine synthase A 0.57 PfGW456L13_155 tRNA dimethylallyltransferase (EC 2.5.1.75) low > 87
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF4791 tRNA dihydrouridine synthase A 0.43 GFF5491 tRNA dimethylallyltransferase (EC 2.5.1.75) 0.54 41
Brevundimonas sp. GW460-12-10-14-LB2 0.51 A4249_RS10515 tRNA dihydrouridine(20/20a) synthase DusA 0.25 A4249_RS05030 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Rhodopseudomonas palustris CGA009 0.50 TX73_010150 tRNA dihydrouridine(20/20a) synthase DusA 0.31 TX73_010460 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 86
Rhizobium sp. OAE497 0.50 ABIE40_RS10895 tRNA dihydrouridine(20/20a) synthase DusA 0.30 ABIE40_RS11505 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Agrobacterium fabrum C58 0.49 Atu1515 hypothetical protein 0.29 Atu2039 tRNA delta(2)-isopentenylpyrophosphate — —
Dinoroseobacter shibae DFL-12 0.48 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) 0.24 Dshi_1492 tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) — —
Bosea sp. OAE506 0.48 ABIE41_RS21285 tRNA dihydrouridine(20/20a) synthase DusA 0.27 ABIE41_RS12880 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA low > 77
Phaeobacter inhibens DSM 17395 0.48 PGA1_c19230 tRNA-dihydrouridine synthase A 0.23 PGA1_c14200 tRNA delta(2)-isopentenylpyrophosphate transferase MiaA — —
Castellaniella sp019104865 MT123 0.46 ABCV34_RS04335 tRNA dihydrouridine(20/20a) synthase DusA 0.45 ABCV34_RS08790 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA — —
Sinorhizobium meliloti 1021 0.43 SMc04235 tRNA-dihydrouridine synthase A 0.30 SMc01435 tRNA delta(2)-isopentenylpyrophosphate transferase — —

Not shown: 1 genomes with orthologs for B158DRAFT_2018 only; 18 genomes with orthologs for B158DRAFT_1951 only