Conservation of cofitness between Atu4000 and Atu3784 in Agrobacterium fabrum C58

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1.0 Atu3784 glutamate synthase large subunit 0.71 16
Rhizobium sp. OAE497 0.69 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.89 ABIE40_RS16275 glutamate synthase large subunit — —
Rhodopseudomonas palustris CGA009 0.62 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.69 TX73_004590 glutamate synthase large subunit — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.38 Ga0059261_1800 Glutamate synthase domain 2 low > 68
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_0031 bioA aminotransferase 0.39 Synpcc7942_0890 glsF glutamate synthase (ferredoxin) — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 AMB_RS02685 glutamate synthase large subunit — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.50 CA265_RS08700 glutamate synthase large subunit low > 88
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.36 ABZR86_RS16795 glutamate synthase large subunit low > 74
Rhodanobacter denitrificans MT42 0.35 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 LRK55_RS10665 glutamate synthase large subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.35 LRK54_RS10960 glutamate synthase large subunit low > 59
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.37 Xcc-8004.44.1 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.60 42
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 OKGIIK_15200 Glutamate synthase subunit alpha low > 52
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.38 HP15_482 glutamate synthase subunit alpha — —
Ralstonia solanacearum PSI07 0.33 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.59 RPSI07_RS10320 glutamate synthase subunit alpha 0.51 53
Ralstonia solanacearum GMI1000 0.33 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 RS_RS14860 glutamate synthase subunit alpha low > 80
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 RALBFv3_RS06915 glutamate synthase subunit alpha low > 76
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.59 ABZR87_RS02570 glutamate synthase-related protein low > 80
Ralstonia solanacearum UW163 0.33 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 UW163_RS06700 glutamate synthase subunit alpha — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.60 H281DRAFT_05620 glutamate synthase (NADH) large subunit low > 103
Pseudomonas putida KT2440 0.32 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 PP_5076 L-glutamate synthase(NADPH) alpha subunit low > 96
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.59 BPHYT_RS17855 glutamate synthase low > 109
Pseudomonas stutzeri RCH2 0.32 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.37 Psest_3711 Glutamate synthase domain 2 low > 67
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.36 Pf1N1B4_1534 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.60 HSERO_RS19595 glutamate synthase low > 78
Pseudomonas sp. S08-1 0.32 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.38 OH686_10005 Glutamate synthase [NADPH] large chain low > 80
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.37 PfGW456L13_272 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 87
Pectobacterium carotovorum WPP14 0.32 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 HER17_RS19910 glutamate synthase large subunit low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.37 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.37 Pf6N2E2_3752 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 AO356_09375 glutamate synthase low > 104
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.37 Psyr_0411 glutamate synthase (NADPH) large subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 AO353_12515 glutamate synthase 0.60 53
Pseudomonas simiae WCS417 0.31 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 PS417_02000 glutamate synthase 0.29 29
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.37 PFLU_RS02045 glutamate synthase large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.37 PFLU_RS02045 glutamate synthase large subunit low > 109
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.46 CSW01_12020 glutamate synthase large subunit low > 62
Pseudomonas sp. RS175 0.31 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 PFR28_05015 Glutamate synthase [NADPH] large chain low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.38 GFF2956 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 0.49 54
Serratia liquefaciens MT49 0.30 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.39 IAI46_22345 glutamate synthase large subunit low > 86
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.58 RR42_RS18990 glutamate synthase 0.34 112
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.36 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 67
Caulobacter crescentus NA1000 0.30 CCNA_01648 adenosylmethionine-8-amino-7-oxononanoate 0.36 CCNA_03722 glutamate synthase (NADPH) large chain GltB low > 66
Dickeya dianthicola 67-19 0.30 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 HGI48_RS01560 glutamate synthase large subunit low > 71
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.38 EX28DRAFT_3275 Glutamate synthase domain 2 low > 76
Alteromonas macleodii MIT1002 0.30 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.38 MIT1002_03139 Glutamate synthase [NADPH] large chain precursor low > 70
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.59 QEN71_RS28010 glutamate synthase-related protein — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 ABCV34_RS11150 glutamate synthase-related protein low > 48
Variovorax sp. SCN45 0.30 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.58 GFF5332 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 127
Erwinia tracheiphila SCR3 0.30 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 LU632_RS21315 gltB glutamate synthase large subunit — —
Rahnella sp. WP5 0.30 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.39 EX31_RS12515 glutamate synthase large subunit low > 89
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_2790 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.47 Echvi_1244 Glutamate synthase domain 2 low > 79
Dickeya dianthicola ME23 0.29 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 DZA65_RS01635 glutamate synthase large subunit low > 75
Acinetobacter radioresistens SK82 0.29 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.37 MPMX26_02808 Glutamate synthase [NADPH] large chain low > 36
Klebsiella michiganensis M5al 0.29 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 BWI76_RS25315 glutamate synthase large subunit low > 92
Enterobacter sp. TBS_079 0.29 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.38 MPMX20_04126 Glutamate synthase [NADPH] large chain low > 85
Escherichia coli BW25113 0.29 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.38 b3212 gltB glutamate synthase, large subunit (NCBI) low > 76
Dickeya dadantii 3937 0.29 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 DDA3937_RS01665 glutamate synthase large subunit low > 74
Variovorax sp. OAS795 0.29 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.58 ABID97_RS23225 glutamate synthase-related protein low > 91
Escherichia coli ECOR38 0.29 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 HEPCGN_16760 gltB3 Glutamate synthase domain 3 low > 85
Escherichia coli BL21 0.29 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.38 ECD_03077 glutamate synthase, large subunit low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.38 OHPLBJKB_00488 Glutamate synthase [NADPH] large chain low > 73
Escherichia fergusonii Becca 0.28 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.38 EFB2_00611 Glutamate synthase [NADPH] large chain low > 86
Escherichia coli Nissle 1917 0.28 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 ECOLIN_RS18475 glutamate synthase large subunit low > 52
Dechlorosoma suillum PS 0.28 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.61 Dsui_1096 glutamate synthase family protein low > 51
Escherichia coli ECRC101 0.28 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 MCAODC_08405 gltB glutamate synthase large subunit — —
Escherichia coli ECOR27 0.28 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 NOLOHH_09685 gltB glutamate synthase large subunit low > 57
Escherichia coli ECRC101 0.28 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 OKFHMN_17885 gltB glutamate synthase large subunit — —
Escherichia coli ECRC62 0.28 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 BNILDI_01850 gltB glutamate synthase large subunit — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.58 GFF1327 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 90
Escherichia coli ECRC99 0.28 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 KEDOAH_10265 gltB glutamate synthase large subunit — —
Escherichia coli ECRC98 0.28 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 JDDGAC_21510 gltB glutamate synthase large subunit — —
Escherichia coli ECRC102 0.28 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.38 NIAGMN_15645 gltB glutamate synthase large subunit — —
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.46 HMPREF1078_RS01270 glutamate synthase large subunit low > 61
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.58 Ac3H11_4710 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) low > 79
Phocaeicola vulgatus CL09T03C04 0.28 HMPREF1058_RS17955 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.46 HMPREF1058_RS06920 glutamate synthase large subunit low > 67
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS14245 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.46 ABI39_RS20685 glutamate synthase large subunit low > 72
Shewanella sp. ANA-3 0.27 Shewana3_2520 aminotransferase (RefSeq) 0.37 Shewana3_3050 gltB glutamate synthase subunit alpha (RefSeq) — —
Shewanella loihica PV-4 0.27 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.38 Shew_1032 gltB glutamate synthase subunit alpha (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.37 PGA1_c36100 glutamate synthase [NADPH] large chain low > 62
Shewanella oneidensis MR-1 0.26 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.37 SO1325 gltB glutamate synthase, large subunit (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.26 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.37 Sama_0857 gltB glutamate synthase subunit alpha (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.26 Rv1568 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.46 Rv3859c Probable ferredoxin-dependent glutamate synthase [NADPH] (large subunit) GltB (L-glutamate synthase) (L-glutamate synthetase) (NADH-glutamate synthase) (glutamate synthase (NADH))(NADPH-GOGAT) — —

Not shown: 8 genomes with orthologs for Atu4000 only; 11 genomes with orthologs for Atu3784 only