| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1446 | | two component response regulator | 1.0 | Atu3784 | | glutamate synthase large subunit | 0.46 | 15 |
| Rhizobium sp. OAE497 | 0.95 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.89 | ABIE40_RS16275 | | glutamate synthase large subunit | — | — |
| Sinorhizobium meliloti 1021 | 0.93 | SMc01043 | | nitrogen assimilation regulatory protein | 0.87 | SMc04028 | | glutamate synthase | 0.46 | 12 |
| Rhodopseudomonas palustris CGA009 | 0.75 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.69 | TX73_004590 | | glutamate synthase large subunit | — | — |
| Bosea sp. OAE506 | 0.73 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | 0.74 | ABIE41_RS08565 | | glutamate synthase large subunit | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.70 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.38 | AMB_RS02685 | | glutamate synthase large subunit | — | — |
| Azospirillum sp. SherDot2 | 0.69 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.39 | MPMX19_02657 | | Glutamate synthase [NADPH] large chain | — | — |
| Rhodospirillum rubrum S1H | 0.66 | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | 0.39 | Rru_A0019 | | Glutamate synthase (ferredoxin) (NCBI) | — | — |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.36 | CCNA_03722 | | glutamate synthase (NADPH) large chain GltB | 0.69 | 34 |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.36 | CCNA_03722 | | glutamate synthase (NADPH) large chain GltB | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.49 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | 0.38 | Ga0059261_1800 | | Glutamate synthase domain 2 | 0.60 | 19 |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_1574 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.37 | Dshi_0002 | | Glutamate synthase (ferredoxin) (RefSeq) | 0.65 | 3 |
| Escherichia coli Nissle 1917 | 0.42 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | 0.38 | ECOLIN_RS18475 | | glutamate synthase large subunit | low | > 52 |
| Escherichia fergusonii Becca | 0.42 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | 0.38 | EFB2_00611 | | Glutamate synthase [NADPH] large chain | low | > 86 |
| Escherichia coli BW25113 | 0.42 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | 0.38 | b3212 | gltB | glutamate synthase, large subunit (NCBI) | 0.40 | 5 |
| Escherichia coli ECRC99 | 0.42 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | 0.38 | KEDOAH_10265 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli ECRC98 | 0.42 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | 0.38 | JDDGAC_21510 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli ECRC102 | 0.42 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | 0.38 | NIAGMN_15645 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli ECRC62 | 0.42 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | 0.38 | BNILDI_01850 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli ECOR27 | 0.42 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | 0.38 | NOLOHH_09685 | gltB | glutamate synthase large subunit | low | > 57 |
| Escherichia coli BL21 | 0.42 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | 0.38 | ECD_03077 | | glutamate synthase, large subunit | 0.50 | 15 |
| Escherichia coli ECRC101 | 0.42 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | 0.38 | OKFHMN_17885 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli ECRC101 | 0.42 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | 0.38 | MCAODC_08405 | gltB | glutamate synthase large subunit | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.42 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | 0.38 | OHPLBJKB_00488 | | Glutamate synthase [NADPH] large chain | low | > 73 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | 0.38 | MPMX20_04126 | | Glutamate synthase [NADPH] large chain | 0.79 | 4 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | 0.38 | EX28DRAFT_3275 | | Glutamate synthase domain 2 | 0.61 | 6 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF2220 | | Nitrogen regulation protein NR(I) | 0.38 | GFF2956 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | low | > 78 |
| Klebsiella michiganensis M5al | 0.41 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | 0.38 | BWI76_RS25315 | | glutamate synthase large subunit | 0.70 | 3 |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | 0.38 | HEPCGN_16760 | gltB3 | Glutamate synthase domain 3 | low | > 85 |
| Variovorax sp. SCN45 | 0.41 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.58 | GFF5332 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | — | — |
| Pectobacterium carotovorum WPP14 | 0.41 | HER17_RS21440 | | nitrogen regulation protein NR(I) | 0.38 | HER17_RS19910 | | glutamate synthase large subunit | low | > 75 |
| Serratia liquefaciens MT49 | 0.41 | IAI46_24960 | | nitrogen regulation protein NR(I) | 0.39 | IAI46_22345 | | glutamate synthase large subunit | 0.70 | 12 |
| Variovorax sp. OAS795 | 0.41 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.58 | ABID97_RS23225 | | glutamate synthase-related protein | 0.49 | 8 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_01292 | | DNA-binding transcriptional regulator NtrC | 0.37 | MPMX26_02808 | | Glutamate synthase [NADPH] large chain | 0.95 | 2 |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.59 | QEN71_RS28010 | | glutamate synthase-related protein | low | > 153 |
| Dickeya dianthicola ME23 | 0.40 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | 0.38 | DZA65_RS01635 | | glutamate synthase large subunit | 0.79 | 5 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | 0.38 | HGI48_RS01560 | | glutamate synthase large subunit | 0.89 | 1 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | 0.38 | DDA3937_RS01665 | | glutamate synthase large subunit | 0.80 | 11 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.37 | Shewana3_3050 | gltB | glutamate synthase subunit alpha (RefSeq) | 0.89 | 4 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.59 | RPSI07_RS10320 | | glutamate synthase subunit alpha | low | > 81 |
| Rahnella sp. WP5 | 0.40 | EX31_RS15880 | | nitrogen regulation protein NR(I) | 0.39 | EX31_RS12515 | | glutamate synthase large subunit | 0.84 | 3 |
| Phaeobacter inhibens DSM 17395 | 0.40 | PGA1_c14790 | | nitrogen regulation protein NtrC | 0.37 | PGA1_c36100 | | glutamate synthase [NADPH] large chain | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS12980 | | chemotaxis protein CheY | 0.58 | RR42_RS18990 | | glutamate synthase | 0.48 | 22 |
| Shewanella loihica PV-4 | 0.40 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.38 | Shew_1032 | gltB | glutamate synthase subunit alpha (RefSeq) | 0.63 | 56 |
| Marinobacter adhaerens HP15 | 0.40 | HP15_425 | | two-component response regulator NtrC | 0.38 | HP15_482 | | glutamate synthase subunit alpha | — | — |
| Shewanella oneidensis MR-1 | 0.40 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | 0.37 | SO1325 | gltB | glutamate synthase, large subunit (NCBI ptt file) | 0.78 | 6 |
| Shewanella amazonensis SB2B | 0.40 | Sama_3427 | | response regulator receiver protein (RefSeq) | 0.37 | Sama_0857 | gltB | glutamate synthase subunit alpha (RefSeq) | 0.64 | 9 |
| Pseudomonas fluorescens FW300-N2E2 | 0.40 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | 0.37 | Pf6N2E2_3752 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.44 | 55 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_09730 | | nitrogen regulation protein NR(I) | 0.37 | AO356_09375 | | glutamate synthase | 0.38 | 48 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.60 | H281DRAFT_05620 | | glutamate synthase (NADH) large subunit | 0.40 | 20 |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.59 | BPHYT_RS17855 | | glutamate synthase | 0.59 | 7 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_01635 | | nitrogen regulation protein NR(I) | 0.37 | PS417_02000 | | glutamate synthase | 0.49 | 68 |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.59 | ABZR87_RS02570 | | glutamate synthase-related protein | 0.32 | 65 |
| Pseudomonas fluorescens SBW25-INTG | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.37 | PFLU_RS02045 | | glutamate synthase large subunit | 0.70 | 3 |
| Pseudomonas fluorescens SBW25 | 0.40 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | 0.37 | PFLU_RS02045 | | glutamate synthase large subunit | low | > 109 |
| Pseudomonas sp. RS175 | 0.39 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | 0.37 | PFR28_05015 | | Glutamate synthase [NADPH] large chain | 0.39 | 25 |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | 0.38 | LU632_RS21315 | gltB | glutamate synthase large subunit | low | > 74 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.37 | Psyr_0411 | | glutamate synthase (NADPH) large subunit | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | 0.37 | Psyr_0411 | | glutamate synthase (NADPH) large subunit | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | 0.36 | Pf1N1B4_1534 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.59 | 8 |
| Pseudomonas fluorescens FW300-N2E3 | 0.39 | AO353_12145 | | nitrogen regulation protein NR(I) | 0.37 | AO353_12515 | | glutamate synthase | 0.55 | 6 |
| Pseudomonas sp. S08-1 | 0.39 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.38 | OH686_10005 | | Glutamate synthase [NADPH] large chain | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.39 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | 0.38 | MIT1002_03139 | | Glutamate synthase [NADPH] large chain precursor | 0.69 | 58 |
| Pseudomonas fluorescens GW456-L13 | 0.39 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | 0.37 | PfGW456L13_272 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | 0.78 | 3 |
| Pseudomonas putida KT2440 | 0.39 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | 0.37 | PP_5076 | | L-glutamate synthase(NADPH) alpha subunit | 0.67 | 4 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.58 | GFF1327 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | low | > 90 |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.60 | UW163_RS06700 | | glutamate synthase subunit alpha | — | — |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.37 | Psest_3711 | | Glutamate synthase domain 2 | 0.78 | 4 |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.60 | RALBFv3_RS06915 | | glutamate synthase subunit alpha | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS15680 | | chemotaxis protein CheY | 0.60 | HSERO_RS19595 | | glutamate synthase | 0.50 | 8 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_13865 | | nitrogen regulation protein NR(I) | 0.46 | CSW01_12020 | | glutamate synthase large subunit | low | > 62 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.60 | RS_RS14860 | | glutamate synthase subunit alpha | — | — |
| Dechlorosoma suillum PS | 0.38 | Dsui_1051 | | nitrogen regulation protein NR(I) | 0.61 | Dsui_1096 | | glutamate synthase family protein | low | > 51 |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | 0.35 | LRK55_RS10665 | | glutamate synthase large subunit | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | 0.35 | LRK54_RS10960 | | glutamate synthase large subunit | low | > 59 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | 0.37 | Xcc-8004.44.1 | | Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | low | > 74 |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | 0.58 | ABCV34_RS11150 | | glutamate synthase-related protein | low | > 48 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | 0.58 | OKGIIK_15200 | | Glutamate synthase subunit alpha | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | 0.36 | ABZR86_RS16795 | | glutamate synthase large subunit | 0.67 | 62 |
| Phocaeicola vulgatus CL09T03C04 | 0.31 | HMPREF1058_RS04160 | | sigma-54-dependent Fis family transcriptional regulator | 0.46 | HMPREF1058_RS06920 | | glutamate synthase large subunit | low | > 67 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT1529 | | two-component system response regulator (NCBI ptt file) | 0.45 | BT0553 | | glutamate synthase, large subunit (NCBI ptt file) | low | > 81 |
| Phocaeicola dorei CL03T12C01 | 0.31 | ABI39_RS17060 | | sigma-54-dependent Fis family transcriptional regulator | 0.46 | ABI39_RS20685 | | glutamate synthase large subunit | low | > 72 |
| Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS04840 | | sigma-54-dependent Fis family transcriptional regulator | 0.45 | HMPREF1181_RS16055 | | glutamate synthase large subunit | low | > 56 |
| Bacteroides ovatus ATCC 8483 | 0.30 | BACOVA_04264 | | Sigma-54 interaction domain protein | 0.45 | BACOVA_03756 | | class II glutamine amidotransferase | low | > 94 |
| Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | 0.46 | HMPREF1078_RS01270 | | glutamate synthase large subunit | low | > 61 |
Not shown: 7 genomes with orthologs for Atu1446 only; 8 genomes with orthologs for Atu3784 only