| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS01105 | | metalloprotease TldD | 1.0 | ABZR87_RS05115 | | ATP-dependent protease subunit HslV | 0.52 | 6 |
| Ralstonia solanacearum IBSBF1503 | 0.92 | RALBFv3_RS05455 | | metalloprotease TldD | 0.89 | RALBFv3_RS09630 | | ATP-dependent protease subunit HslV | low | > 76 |
| Ralstonia solanacearum UW163 | 0.92 | UW163_RS08170 | | metalloprotease TldD | 0.89 | UW163_RS03950 | | ATP-dependent protease subunit HslV | — | — |
| Ralstonia solanacearum GMI1000 | 0.92 | RS_RS13315 | | metalloprotease TldD | 0.91 | RS_RS00215 | | HslU--HslV peptidase proteolytic subunit | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.91 | RPSI07_RS11850 | | metalloprotease TldD | 0.89 | RPSI07_RS23735 | | ATP-dependent protease subunit HslV | low | > 81 |
| Cupriavidus basilensis FW507-4G11 | 0.87 | RR42_RS05875 | | protease TldD | 0.91 | RR42_RS01060 | | peptidase | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.79 | BPHYT_RS03540 | | peptidase C69 | 0.78 | BPHYT_RS01635 | | ATP-dependent protease subunit HslV | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.78 | QEN71_RS26555 | | metalloprotease TldD | 0.78 | QEN71_RS00335 | | ATP-dependent protease subunit HslV | low | > 153 |
| Paraburkholderia graminis OAS925 | 0.78 | ABIE53_000851 | | TldD protein | 0.78 | ABIE53_000422 | | ATP-dependent HslUV protease subunit HslV | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.78 | H281DRAFT_04688 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.78 | H281DRAFT_02206 | | HslV component of HslUV peptidase. Threonine peptidase. MEROPS family T01B | 0.27 | 82 |
| Herbaspirillum seropedicae SmR1 | 0.75 | HSERO_RS07155 | | peptidase C69 | 0.77 | HSERO_RS00910 | | peptidase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.73 | Ac3H11_4036 | | TldD protein, part of TldE/TldD proteolytic complex | 0.74 | Ac3H11_2004 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 79 |
| Variovorax sp. SCN45 | 0.71 | GFF4449 | | TldD protein, part of TldE/TldD proteolytic complex | 0.76 | GFF4484 | | ATP-dependent protease subunit HslV (EC 3.4.25.2) | low | > 127 |
| Variovorax sp. OAS795 | 0.71 | ABID97_RS06335 | | metalloprotease TldD | 0.75 | ABID97_RS06180 | | ATP-dependent protease subunit HslV | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.70 | ABCV34_RS02590 | | metalloprotease TldD | 0.77 | ABCV34_RS13415 | | ATP-dependent protease subunit HslV | low | > 48 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.69 | GFF580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.68 | GFF552 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 90 |
| Dechlorosoma suillum PS | 0.64 | Dsui_3401 | | putative Zn-dependent protease-like protein | 0.81 | Dsui_0581 | | ATP-dependent protease HslVU, peptidase subunit | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.62 | ABZR86_RS21715 | | metalloprotease TldD | 0.68 | ABZR86_RS15035 | | ATP-dependent protease subunit HslV | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.62 | OKGIIK_10280 | tldD | metalloprotease TldD | 0.64 | OKGIIK_15320 | hslV | ATP-dependent protease subunit HslV | — | — |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS06795 | | metalloprotease TldD | 0.53 | ABIE51_RS03040 | | ATP-dependent protease subunit HslV | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.60 | LRK54_RS03395 | | metalloprotease TldD | 0.65 | LRK54_RS08525 | | ATP-dependent protease subunit HslV | — | — |
| Rhodanobacter denitrificans MT42 | 0.60 | LRK55_RS03145 | | metalloprotease TldD | 0.65 | LRK55_RS08290 | | ATP-dependent protease subunit HslV | — | — |
| Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00227 | | protease TldD | 0.59 | MIT1002_03660 | | ATP-dependent protease subunit HslV | low | > 70 |
| Pseudomonas putida KT2440 | 0.59 | PP_0940 | | putative protease involved in Microcin B17 maturation and in sensitivity to the DNA gyrase inhibitor LetD | 0.61 | PP_5000 | | peptidase component of the ATP-dependent HslVU protease | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_4156 | | microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 | 0.61 | Psyr_0395 | | HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.58 | PFLU_RS04340 | | metalloprotease TldD | 0.66 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.58 | PFLU_RS04340 | | metalloprotease TldD | 0.66 | PFLU_RS01965 | | ATP-dependent protease subunit HslV | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.58 | AO353_05215 | | protease TldD | 0.66 | AO353_12430 | | ATP-dependent protease subunit HslV | — | — |
| Pseudomonas simiae WCS417 | 0.58 | PS417_04285 | | protease TldD | 0.66 | PS417_01920 | | ATP-dependent protease subunit HslV | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.57 | Pf1N1B4_1092 | | TldD protein, part of TldE/TldD proteolytic complex | 0.66 | Pf1N1B4_1552 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Pantoea sp. MT58 | 0.57 | IAI47_02465 | | metalloprotease TldD | 0.65 | IAI47_00850 | | ATP-dependent protease subunit HslV | low | > 76 |
| Pseudomonas fluorescens FW300-N2C3 | 0.57 | AO356_07095 | | protease TldD | 0.58 | AO356_09455 | | ATP-dependent protease subunit HslV | low | > 104 |
| Escherichia coli BW25113 | 0.57 | b3244 | tldD | predicted peptidase (NCBI) | 0.63 | b3932 | hslV | ATP-dependent protease peptidase subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.57 | OKFHMN_17755 | tldD | metalloprotease TldD | 0.63 | OKFHMN_13735 | hslV | ATP-dependent protease subunit HslV | low | > 80 |
| Escherichia coli ECRC99 | 0.57 | KEDOAH_10395 | tldD | metalloprotease TldD | 0.63 | KEDOAH_14425 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli BL21 | 0.57 | ECD_03104 | | putative peptidase | 0.63 | ECD_03817 | | peptidase component of the HslUV protease | low | > 61 |
| Escherichia coli ECRC101 | 0.57 | MCAODC_08275 | tldD | metalloprotease TldD | 0.63 | MCAODC_04235 | hslV | ATP-dependent protease subunit HslV | low | > 87 |
| Escherichia coli ECOR27 | 0.57 | NOLOHH_09555 | tldD | metalloprotease TldD | 0.63 | NOLOHH_05880 | hslV | ATP-dependent protease subunit HslV | low | > 75 |
| Escherichia coli ECRC98 | 0.57 | JDDGAC_21380 | tldD | metalloprotease TldD | 0.63 | JDDGAC_17360 | hslV | ATP-dependent protease subunit HslV | low | > 86 |
| Escherichia coli ECRC102 | 0.57 | NIAGMN_15515 | tldD | metalloprotease TldD | 0.63 | NIAGMN_11490 | hslV | ATP-dependent protease subunit HslV | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.57 | OHPLBJKB_00460 | | Metalloprotease TldD | 0.63 | OHPLBJKB_04119 | | ATP-dependent protease subunit HslV | low | > 73 |
| Escherichia coli Nissle 1917 | 0.57 | ECOLIN_RS18595 | | metalloprotease TldD | 0.63 | ECOLIN_RS22640 | | ATP-dependent protease subunit HslV | low | > 55 |
| Escherichia coli ECRC62 | 0.57 | BNILDI_01980 | tldD | metalloprotease TldD | 0.62 | BNILDI_05650 | hslV | ATP-dependent protease subunit HslV | low | > 75 |
| Escherichia fergusonii Becca | 0.57 | EFB2_00586 | | Metalloprotease TldD | 0.63 | EFB2_04686 | | ATP-dependent protease subunit HslV | low | > 86 |
| Escherichia coli ECOR38 | 0.57 | HEPCGN_16620 | tldD | metalloprotease TldD | 0.63 | HEPCGN_12380 | hslV | ATP-dependent protease subunit HslV | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.57 | Pf6N2E2_3280 | | TldD protein, part of TldE/TldD proteolytic complex | 0.58 | Pf6N2E2_3769 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.57 | GFF2140 | | TldD protein, part of TldE/TldD proteolytic complex | 0.53 | GFF2314 | | ATP-dependent protease HslV (EC 3.4.25.-) | low | > 78 |
| Serratia liquefaciens MT49 | 0.57 | IAI46_22685 | | metalloprotease TldD | 0.64 | IAI46_24570 | | ATP-dependent protease subunit HslV | low | > 86 |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS01460 | | metalloprotease TldD | 0.65 | DDA3937_RS00920 | | ATP-dependent protease subunit HslV | low | > 74 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS01380 | | metalloprotease TldD | 0.64 | HGI48_RS20455 | | ATP-dependent protease subunit HslV | low | > 71 |
| Pseudomonas fluorescens GW456-L13 | 0.57 | PfGW456L13_5026 | | TldD protein, part of TldE/TldD proteolytic complex | 0.58 | PfGW456L13_289 | | ATP-dependent protease HslV (EC 3.4.25.-) | — | — |
| Enterobacter sp. TBS_079 | 0.57 | MPMX20_04151 | | Metalloprotease TldD | 0.64 | MPMX20_04537 | | ATP-dependent protease subunit HslV | low | > 85 |
| Dickeya dianthicola ME23 | 0.56 | DZA65_RS01440 | | metalloprotease TldD | 0.64 | DZA65_RS21500 | | ATP-dependent protease subunit HslV | low | > 75 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_00161 | | Metalloprotease TldD | 0.58 | PFR28_04999 | | ATP-dependent protease subunit HslV | — | — |
| Shewanella loihica PV-4 | 0.56 | Shew_0410 | | peptidase U62, modulator of DNA gyrase (RefSeq) | 0.66 | Shew_0375 | | ATP-dependent protease peptidase subunit (RefSeq) | — | — |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS25470 | | metalloprotease TldD | 0.64 | BWI76_RS00755 | | ATP-dependent protease subunit HslV | low | > 92 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_3641 | | microcin-processing peptidase 2 (RefSeq) | 0.63 | Shewana3_3699 | | ATP-dependent protease peptidase subunit (RefSeq) | low | > 73 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS20140 | | metalloprotease TldD | 0.65 | HER17_RS00855 | | ATP-dependent protease subunit HslV | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_3320 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.58 | Psest_3936 | | ATP-dependent protease HslVU, peptidase subunit | low | > 67 |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_3295 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.64 | EX28DRAFT_4405 | | ATP-dependent protease HslVU, peptidase subunit | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.55 | LU632_RS21420 | tldD | metalloprotease TldD | 0.65 | LU632_RS19670 | hslV | ATP-dependent protease subunit HslV | low | > 74 |
| Pseudomonas sp. S08-1 | 0.55 | OH686_08580 | | TldD protein, part of TldE/TldD proteolytic complex | 0.61 | OH686_10095 | | ATP-dependent protease HslVU, peptidase subunit | low | > 80 |
| Rahnella sp. WP5 | 0.55 | EX31_RS12265 | | metalloprotease TldD | 0.64 | EX31_RS14240 | | ATP-dependent protease subunit HslV | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_02220 | | metalloprotease TldD | 0.66 | CSW01_13515 | | HslU--HslV peptidase proteolytic subunit | low | > 62 |
| Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_2072 | | microcin-processing peptidase 2. Unknown type peptidase. MEROPS family U62 | 0.68 | B158DRAFT_0748 | | ATP-dependent protease HslVU, peptidase subunit | low | > 40 |
| Shewanella oneidensis MR-1 | 0.54 | SO4091 | tldD | tldD protein (NCBI ptt file) | 0.63 | SO4162 | hslV | ATP-dependent protease HslV (NCBI ptt file) | low | > 76 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00882 | | Metalloprotease TldD | 0.53 | MPMX19_02548 | | ATP-dependent protease subunit HslV | low | > 112 |
| Sphingomonas koreensis DSMZ 15582 | 0.52 | Ga0059261_2252 | | Predicted Zn-dependent proteases and their inactivated homologs | 0.63 | Ga0059261_3341 | | ATP-dependent protease HslVU, peptidase subunit | low | > 68 |
| Shewanella amazonensis SB2B | 0.52 | Sama_0474 | | TldD protein (RefSeq) | 0.67 | Sama_0441 | | ATP-dependent protease peptidase subunit (RefSeq) | low | > 62 |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS10600 | | peptidase C69 | 0.59 | AZOBR_RS01655 | | peptidase | — | — |
| Rhodospirillum rubrum S1H | 0.51 | Rru_A0567 | | Peptidase U62, modulator of DNA gyrase (NCBI) | 0.58 | Rru_A3599 | | 20S proteasome, A and B subunits (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_004255 | | metalloprotease TldD | 0.60 | TX73_001600 | | ATP-dependent protease subunit HslV | low | > 86 |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_03522 | | Zn-dependent protease TldD | 0.56 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_03522 | | Zn-dependent protease TldD | 0.56 | CCNA_03843 | | ATP-dependent endopeptidase hsl proteolytic subunit HslV | low | > 67 |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS04050 | | metalloprotease TldD | 0.54 | ABIE40_RS19465 | | ATP-dependent protease subunit HslV | 0.90 | 14 |
| Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS21030 | | metalloprotease TldD | 0.54 | AMB_RS22950 | | HslU--HslV peptidase proteolytic subunit | low | > 64 |
| Sinorhizobium meliloti 1021 | 0.49 | SMc00960 | | hypothetical protein | 0.61 | SMc02575 | | ATP-dependent protease peptidase subunit | 0.26 | 24 |
| Agrobacterium fabrum C58 | 0.49 | Atu0765 | | TldD | 0.57 | Atu0044 | | heat shock protein hslV | low | > 89 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.47 | A4249_RS10860 | | metalloprotease TldD | 0.61 | A4249_RS12390 | | ATP-dependent protease subunit HslV | low | > 48 |
| Phaeobacter inhibens DSM 17395 | 0.47 | PGA1_c06240 | | protein TldD | 0.51 | PGA1_c35260 | | ATP-dependent protease HslV | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_1139 | | peptidase U62 modulator of DNA gyrase (RefSeq) | 0.54 | Dshi_3440 | | 20S proteasome A and B subunits (RefSeq) | low | > 64 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.09 | CA264_16655 | | TldD protein | 0.49 | CA264_04815 | | ATP-dependent protease subunit HslV | low | > 74 |
Not shown: 9 genomes with orthologs for ABZR87_RS01105 only; 5 genomes with orthologs for ABZR87_RS05115 only