| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Variovorax sp. OAS795 | 1.0 | ABID97_RS23215 | | ABC transporter ATP-binding protein | 1.0 | ABID97_RS00325 | | efflux RND transporter permease subunit | 0.55 | 9 |
| Variovorax sp. SCN45 | 0.84 | GFF5334 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.93 | GFF3725 | | RND efflux system, inner membrane transporter | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.76 | Ac3H11_4712 | | Methionine ABC transporter ATP-binding protein | 0.84 | Ac3H11_4448 | | RND efflux system, inner membrane transporter CmeB | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF1325 | | Methionine ABC transporter ATP-binding protein | 0.81 | GFF3840 | | RND efflux system, inner membrane transporter CmeB | low | > 90 |
| Cupriavidus basilensis FW507-4G11 | 0.63 | RR42_RS18970 | | toluene ABC transporter ATP-binding protein | 0.60 | RR42_RS20650 | | multidrug efflux RND transporter permease subunit | 0.51 | 16 |
| Burkholderia phytofirmans PsJN | 0.63 | BPHYT_RS17765 | | toluene ABC transporter ATP-binding protein | 0.55 | BPHYT_RS16170 | | multidrug efflux RND transporter permease subunit | — | — |
| Ralstonia solanacearum GMI1000 | 0.63 | RS_RS14845 | | ABC transporter ATP-binding protein | 0.68 | RS_RS00045 | | multidrug efflux RND transporter permease subunit | 0.54 | 18 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.63 | H281DRAFT_05641 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | 0.55 | H281DRAFT_04170 | | multidrug efflux pump | 0.39 | 56 |
| Ralstonia solanacearum PSI07 | 0.63 | RPSI07_RS10335 | | ABC transporter ATP-binding protein | 0.68 | RPSI07_RS23905 | | hydrophobe/amphiphile efflux-1 family RND transporter | low | > 81 |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS02555 | | ABC transporter ATP-binding protein | 0.67 | ABZR87_RS05315 | | efflux RND transporter permease subunit | low | > 80 |
| Paraburkholderia graminis OAS925 | 0.62 | ABIE53_003712 | | phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein | 0.54 | ABIE53_003408 | | multidrug efflux pump | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.62 | QEN71_RS27920 | | ABC transporter ATP-binding protein | 0.55 | QEN71_RS02525 | | efflux RND transporter permease subunit | low | > 153 |
| Ralstonia solanacearum UW163 | 0.61 | UW163_RS06715 | | ABC transporter ATP-binding protein | 0.67 | UW163_RS04135 | | multidrug efflux RND transporter permease subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.61 | RALBFv3_RS06900 | | ABC transporter ATP-binding protein | 0.67 | RALBFv3_RS09445 | | multidrug efflux RND transporter permease subunit | 0.62 | 11 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_2436 | | toluene tolerance ABC efflux transporter, ATP-binding protein | 0.40 | HP15_933 | | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family | low | > 73 |
| Methylophilus sp. DMC18 | 0.58 | GFF1551 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.55 | GFF2593 | | Multidrug efflux pump subunit AcrB | — | — |
| Herbaspirillum seropedicae SmR1 | 0.58 | HSERO_RS20400 | | toluene ABC transporter ATP-binding protein | 0.69 | HSERO_RS02410 | | acriflavine resistance protein B | — | — |
| Dechlorosoma suillum PS | 0.57 | Dsui_1398 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.54 | Dsui_3182 | | hydrophobe/amphiphile efflux-1 (HAE1) family transporter | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_05150 | | ABC transporter ATP-binding protein | 0.58 | AO353_26845 | | acriflavine resistance protein B | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_01805 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.56 | IKLFDK_23290 | | multidrug efflux RND transporter permease subunit MexB | low | > 101 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_5008 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.58 | PfGW456L13_2954 | | RND efflux system, inner membrane transporter CmeB | low | > 87 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_4141 | | ABC transporter | 0.54 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_4141 | | ABC transporter | 0.54 | Psyr_4008 | | Hydrophobe/amphiphile efflux-1 HAE1 | 0.32 | 36 |
| Shewanella amazonensis SB2B | 0.55 | Sama_3081 | | ABC transporter, ATP-binding protein, putative (RefSeq) | 0.53 | Sama_3554 | | AcrB/AcrD/AcrF family protein (RefSeq) | low | > 62 |
| Pseudomonas putida KT2440 | 0.55 | PP_0958 | | phospholipid ABC transporter ATP-binding subunit | 0.55 | PP_3456 | | Multidrug resistance protein MexB | low | > 96 |
| Pseudomonas sp. DMC3 | 0.55 | GFF1834 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.57 | GFF2918 | | Multidrug efflux pump subunit AcrB | low | > 89 |
| Pseudomonas sp. BP01 | 0.54 | JOY50_RS11160 | | ATP-binding cassette domain-containing protein | 0.56 | JOY50_RS19675 | | efflux RND transporter permease subunit | low | > 84 |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_07005 | | ABC transporter ATP-binding protein | 0.57 | AO356_28730 | | acriflavine resistance protein B | low | > 104 |
| Pseudomonas sp. S08-1 | 0.54 | OH686_08510 | | Phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | OH686_16050 | | Multidrug efflux system, inner membrane proton/drug antiporter (RND type) | low | > 80 |
| Pseudomonas sp. RS175 | 0.54 | PFR28_00179 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.57 | PFR28_02463 | | Multidrug resistance protein MexB | low | > 88 |
| Pseudomonas sp. SVBP6 | 0.54 | COO64_RS04315 | | ATP-binding cassette domain-containing protein | 0.57 | COO64_RS25445 | | efflux RND transporter permease subunit | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.57 | PFLU_RS13280 | | multidrug efflux RND transporter permease subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS04430 | | ATP-binding cassette domain-containing protein | 0.57 | PFLU_RS13280 | | multidrug efflux RND transporter permease subunit | low | > 109 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_04375 | | ABC transporter ATP-binding protein | 0.57 | PS417_12585 | | acriflavine resistance protein B | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_3260 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.57 | Pf6N2E2_1661 | | RND efflux system, inner membrane transporter CmeB | low | > 103 |
| Acinetobacter radioresistens SK82 | 0.54 | MPMX26_02741 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.48 | MPMX26_00689 | | Multidrug resistance protein MexB | low | > 36 |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_1074 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.58 | Pf1N1B4_4772 | | RND efflux system, inner membrane transporter CmeB | — | — |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_3307 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.55 | Psest_0310 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 67 |
| Rahnella sp. WP5 | 0.53 | EX31_RS12435 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | EX31_RS22470 | | multidrug efflux RND transporter permease subunit | low | > 89 |
| Erwinia amylovora T8 | 0.53 | OLJFJH_07105 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | OLJFJH_17855 | | multidrug efflux RND transporter permease subunit AcrB | low | > 58 |
| Pantoea sp. MT58 | 0.52 | IAI47_17145 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | IAI47_14515 | | multidrug efflux RND transporter permease subunit | 0.40 | 41 |
| Shewanella sp. ANA-3 | 0.52 | Shewana3_0678 | | ABC transporter related (RefSeq) | 0.54 | Shewana3_4045 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | 0.39 | 45 |
| Shewanella oneidensis MR-1 | 0.52 | SO3954 | | ABC transporter, ATP-binding protein, putative (NCBI ptt file) | 0.54 | SO4692 | | AcrB/AcrD/AcrF family protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.51 | Shew_3304 | | ABC transporter-related protein (RefSeq) | 0.52 | Shew_0032 | | hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.51 | GFF2939 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.55 | GFF2116 | | RND efflux system, inner membrane transporter CmeB | low | > 78 |
| Klebsiella michiganensis M5al | 0.51 | BWI76_RS25230 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | BWI76_RS06775 | | multidrug efflux RND transporter permease subunit | 0.44 | 24 |
| Alteromonas macleodii MIT1002 | 0.51 | MIT1002_00834 | | putative ABC transporter ATP-binding protein | 0.50 | MIT1002_00135 | | Multidrug-efflux transporter MexB | low | > 70 |
| Escherichia coli ECRC62 | 0.51 | BNILDI_01760 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | BNILDI_02080 | acrF | multidrug efflux RND transporter permease subunit AcrF | low | > 75 |
| Escherichia coli ECOR27 | 0.51 | NOLOHH_09775 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | NOLOHH_09440 | acrF | multidrug efflux RND transporter permease subunit AcrF | low | > 75 |
| Escherichia coli ECRC99 | 0.51 | KEDOAH_10175 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | KEDOAH_19760 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS18390 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.55 | ECOLIN_RS18755 | | multidrug efflux RND transporter permease subunit AcrF | low | > 55 |
| Escherichia fergusonii Becca | 0.51 | EFB2_00628 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.55 | EFB2_00558 | | Multidrug export protein AcrF | low | > 86 |
| Escherichia coli BW25113 | 0.51 | b3195 | yrbF | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | 0.55 | b3266 | acrF | multidrug efflux system protein (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.51 | ECD_03060 | | ABC transporter maintaining OM lipid asymmetry, ATP-binding protein | 0.55 | ECD_03124 | | multidrug efflux system protein | low | > 61 |
| Escherichia coli ECRC102 | 0.51 | NIAGMN_15735 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | NIAGMN_06260 | acrB | efflux RND transporter permease AcrB | — | — |
| Escherichia coli ECOR38 | 0.51 | HEPCGN_16850 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | HEPCGN_06820 | acrB | efflux RND transporter permease AcrB | low | > 87 |
| Escherichia coli ECRC101 | 0.51 | MCAODC_08495 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | MCAODC_27430 | acrB | efflux RND transporter permease AcrB | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_00505 | | putative phospholipid import ATP-binding protein MlaF | 0.55 | OHPLBJKB_00439 | | Multidrug export protein AcrF | low | > 73 |
| Escherichia coli ECRC100 | 0.51 | OKFHMN_17975 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | OKFHMN_08205 | acrB | efflux RND transporter permease AcrB | low | > 80 |
| Escherichia coli ECRC98 | 0.51 | JDDGAC_21600 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | JDDGAC_25915 | acrD | multidrug efflux RND transporter permease AcrD | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.50 | HER17_RS20025 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | HER17_RS15740 | | multidrug efflux RND transporter permease subunit | low | > 75 |
| Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_3249 | | ABC-type transport system involved in resistance to organic solvents, ATPase component | 0.54 | EX28DRAFT_2496 | | The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family | low | > 76 |
| Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS11885 | | ATP-binding cassette domain-containing protein | 0.53 | ABZR86_RS18285 | | efflux RND transporter permease subunit | low | > 74 |
| Dickeya dadantii 3937 | 0.49 | DDA3937_RS01565 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | DDA3937_RS05735 | | multidrug efflux RND transporter permease subunit | low | > 74 |
| Erwinia tracheiphila SCR3 | 0.49 | LU632_RS21245 | mlaF | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | LU632_RS18185 | | efflux RND transporter permease subunit | — | — |
| Enterobacter sp. TBS_079 | 0.49 | MPMX20_04101 | | Intermembrane phospholipid transport system ATP-binding protein MlaF | 0.54 | MPMX20_01064 | | Multidrug efflux pump subunit AcrB | low | > 85 |
| Dickeya dianthicola ME23 | 0.49 | DZA65_RS01545 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | DZA65_RS06115 | | multidrug efflux RND transporter permease subunit | 0.57 | 36 |
| Dickeya dianthicola 67-19 | 0.49 | HGI48_RS01480 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.53 | HGI48_RS05790 | | multidrug efflux RND transporter permease subunit | low | > 71 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_12135 | mlaF | ABC transporter ATP-binding protein | 0.47 | OKGIIK_09170 | | Efflux pump membrane transporter | low | > 52 |
| Serratia liquefaciens MT49 | 0.48 | IAI46_22430 | | phospholipid ABC transporter ATP-binding protein MlaF | 0.54 | IAI46_05185 | | multidrug efflux RND transporter permease subunit SdeY | low | > 86 |
| Rhodanobacter denitrificans FW104-10B01 | 0.48 | LRK54_RS11760 | | ATP-binding cassette domain-containing protein | 0.47 | LRK54_RS02100 | | multidrug efflux RND transporter permease subunit | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.48 | LRK55_RS11485 | | ATP-binding cassette domain-containing protein | 0.47 | LRK55_RS01875 | | multidrug efflux RND transporter permease subunit | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.48 | LRK53_RS16780 | | ABC transporter ATP-binding protein | 0.48 | LRK53_RS07935 | | multidrug efflux RND transporter permease subunit | low | > 60 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS11180 | | ABC transporter ATP-binding protein | 0.56 | ABCV34_RS04225 | | efflux RND transporter permease subunit | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.43 | Xcc-8004.5363.1 | | Uncharacterized ABC transporter, ATP-binding protein YrbF | 0.53 | Xcc-8004.1794.1 | | RND efflux system, inner membrane transporter CmeB | low | > 74 |
| Lysobacter sp. OAE881 | 0.42 | ABIE51_RS01015 | | ABC transporter ATP-binding protein | 0.47 | ABIE51_RS17980 | | multidrug efflux RND transporter permease subunit | low | > 62 |
| Rhodospirillum rubrum S1H | 0.36 | Rru_A2909 | | ABC transporter component (NCBI) | 0.55 | Rru_A1118 | | Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.32 | DVU1245 | | ABC transporter, ATP-binding protein (TIGR) | 0.54 | DVU2816 | | multidrug resistance protein (TIGR) | low | > 55 |
| Azospirillum brasilense Sp245 | 0.29 | AZOBR_RS08340 | | ABC transporter | 0.55 | AZOBR_RS30185 | | multidrug transporter | low | > 97 |
| Synechocystis sp000284455 PCC 6803 | 0.29 | SGL_RS04315 | | ABC transporter ATP-binding protein | 0.38 | SGL_RS09605 | | efflux RND transporter permease subunit | low | > 51 |
| Synechococcus elongatus PCC 7942 | 0.27 | Synpcc7942_0350 | | ATPase | 0.35 | Synpcc7942_2369 | acrF | Hydrophobe/amphiphile efflux-1 HAE1 | low | > 38 |
Not shown: 10 genomes with orthologs for ABID97_RS23215 only; 11 genomes with orthologs for ABID97_RS00325 only