Conservation of cofitness between DvMF_1001 and DvMF_0154 in Desulfovibrio vulgaris Miyazaki F

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Desulfovibrio vulgaris Miyazaki F 1.0 DvMF_1001 biotin synthase (RefSeq) 1.0 DvMF_0154 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) 0.24 16
Desulfovibrio vulgaris Hildenborough JW710 0.56 DVU2558 bioB biotin synthase (Dmitry Rodionov) 0.88 DVU1377 ilvN-2 acetolactate synthase, small subunit (TIGR) low > 55
Phocaeicola vulgatus CL09T03C04 0.31 HMPREF1058_RS17950 biotin synthase BioB 0.20 HMPREF1058_RS16825 acetolactate synthase small subunit 0.48 60
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS14240 biotin synthase BioB 0.20 ABI39_RS12725 acetolactate synthase small subunit low > 72
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS15300 biotin synthase BioB 0.21 HMPREF1078_RS16685 acetolactate synthase small subunit 0.81 22
Mycobacterium tuberculosis H37Rv 0.28 Rv1589 Probable biotin synthetase BioB 0.49 Rv3002c Probable acetolactate synthase (small subunit) IlvN (acetohydroxy-acid synthase) (AHAS) (ALS)
Methanococcus maripaludis S2 0.28 MMP_RS06370 biotin synthase BioB 0.45 MMP_RS03420 acetolactate synthase small subunit low > 25
Methanococcus maripaludis JJ 0.27 MMJJ_RS07980 biotin synthase BioB 0.45 MMJJ_RS01645 acetolactate synthase small subunit low > 28
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF3992 Biotin synthase (EC 2.8.1.6) 0.49 GFF4277 Acetolactate synthase small subunit (EC 2.2.1.6) low > 90
Agrobacterium fabrum C58 0.23 Atu3997 biotin synthetase 0.41 Atu2035 acetolactate synthase, small subunit low > 89
Rhodopseudomonas palustris CGA009 0.23 TX73_010535 biotin synthase BioB 0.41 TX73_010470 acetolactate synthase small subunit low > 86
Acinetobacter radioresistens SK82 0.23 MPMX26_01785 Biotin synthase 0.48 MPMX26_00473 Acetolactate synthase isozyme 3 small subunit low > 36
Dechlorosoma suillum PS 0.23 Dsui_1297 biotin synthetase 0.41 Dsui_3528 acetolactate synthase, small subunit
Ralstonia solanacearum GMI1000 0.22 RS_RS01305 biotin synthase 0.48 RS_RS10415 acetolactate synthase small subunit low > 80
Castellaniella sp019104865 MT123 0.22 ABCV34_RS15280 biotin synthase BioB 0.41 ABCV34_RS01215 acetolactate synthase small subunit low > 48
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS10465 biotin synthase BioB 0.48 RALBFv3_RS03045 acetolactate synthase small subunit low > 76
Ralstonia solanacearum UW163 0.22 UW163_RS03115 biotin synthase BioB 0.48 UW163_RS10680 acetolactate synthase small subunit
Marinobacter adhaerens HP15 0.22 HP15_2486 biotin synthase 0.47 HP15_532 acetolactate synthase 3 regulatory subunit 0.70 51
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS12235 biotin synthase 0.47 HSERO_RS08655 acetolactate synthase low > 78
Ralstonia sp. UNC404CL21Col 0.22 ABZR87_RS06265 biotin synthase BioB 0.49 ABZR87_RS14950 acetolactate synthase small subunit low > 80
Ralstonia solanacearum PSI07 0.22 RPSI07_RS22850 biotin synthase BioB 0.48 RPSI07_RS14260 acetolactate synthase small subunit low > 81
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS00940 biotin synthase 0.50 RR42_RS05440 acetolactate synthase
Paraburkholderia graminis OAS925 0.21 ABIE53_000577 biotin synthase 0.46 ABIE53_001575 acetolactate synthase-1/3 small subunit low > 113
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02097 biotin synthase 0.46 H281DRAFT_04552 acetolactate synthase, small subunit low > 103
Synechococcus elongatus PCC 7942 0.21 Synpcc7942_0419 bioB biotin synthase 0.50 Synpcc7942_2434 ilvH acetolactate synthase 3 regulatory subunit
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS02150 biotin synthase 0.45 BPHYT_RS06550 acetolactate synthase low > 109
Acidovorax sp. GW101-3H11 0.21 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.49 Ac3H11_526 Acetolactate synthase small subunit (EC 2.2.1.6) 0.48 50
Echinicola vietnamensis KMM 6221, DSM 17526 0.21 Echvi_2566 biotin synthetase 0.26 Echvi_2057 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) low > 79
Pseudomonas putida KT2440 0.21 PP_0362 Biotin synthase 0.46 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.49 44
Rahnella sp. WP5 0.21 EX31_RS23695 biotin synthase BioB 0.42 EX31_RS03660 acetolactate synthase small subunit low > 89
Phaeobacter inhibens DSM 17395 0.21 PGA1_c09120 biotin synthase BioB 0.44 PGA1_c20220 acetolactate synthase isozyme 3 small subunit low > 62
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS01085 biotin synthase BioB 0.45 QEN71_RS24220 acetolactate synthase small subunit
Escherichia coli ECRC101 0.20 MCAODC_25615 bioB biotin synthase BioB 0.42 MCAODC_01210 ilvN acetolactate synthase small subunit low > 87
Pseudomonas sp. S08-1 0.20 OH686_10355 biotin synthase 0.46 OH686_08125 acetolactate synthase, small subunit low > 80
Escherichia coli ECRC100 0.20 OKFHMN_06400 bioB biotin synthase BioB 0.42 OKFHMN_10695 ilvN acetolactate synthase small subunit low > 80
Pseudomonas sp. RS175 0.20 PFR28_04103 Biotin synthase 0.46 PFR28_03698 Acetolactate synthase isozyme 3 small subunit 0.38 31
Escherichia coli ECRC98 0.20 JDDGAC_10035 bioB biotin synthase BioB 0.42 JDDGAC_14290 ilvN acetolactate synthase small subunit low > 86
Escherichia coli ECRC99 0.20 KEDOAH_21510 bioB biotin synthase BioB 0.42 KEDOAH_17460 ilvN acetolactate synthase small subunit
Escherichia coli ECRC102 0.20 NIAGMN_04445 bioB biotin synthase BioB 0.42 NIAGMN_08545 ilvN acetolactate synthase small subunit
Escherichia fergusonii Becca 0.20 EFB2_03330 Biotin synthase 0.42 EFB2_03968 Acetolactate synthase isozyme 3 small subunit low > 86
Escherichia coli ECRC62 0.20 BNILDI_21040 bioB biotin synthase BioB 0.42 BNILDI_08570 ilvN acetolactate synthase small subunit low > 75
Escherichia coli ECOR38 0.20 HEPCGN_01640 bioB biotin synthase BioB 0.42 HEPCGN_08675 ilvN acetolactate synthase small subunit low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02938 Biotin synthase 0.42 OHPLBJKB_03580 Acetolactate synthase isozyme 3 small subunit low > 73
Pseudomonas simiae WCS417 0.20 PS417_26005 biotin synthase 0.46 PS417_23805 acetolactate synthase 3 regulatory subunit 0.41 12
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04130 biotin synthase BioB 0.42 ECOLIN_RS00420 acetolactate synthase small subunit low > 55
Escherichia coli BL21 0.20 ECD_00742 biotin synthase 0.43 ECD_00080 acetolactate synthase 3, small subunit, valine-sensitive low > 61
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.46 Pf6N2E2_5176 Acetolactate synthase small subunit (EC 2.2.1.6) 0.80 4
Variovorax sp. OAS795 0.20 ABID97_RS13955 biotin synthase BioB 0.50 ABID97_RS14890 acetolactate synthase small subunit low > 91
Alteromonas macleodii MIT1002 0.20 MIT1002_01379 Biotin synthase 0.43 MIT1002_00504 Acetolactate synthase isozyme 3 small subunit low > 70
Escherichia coli BW25113 0.20 b0775 bioB biotin synthase (NCBI) 0.43 b0078 ilvH acetolactate synthase small subunit (NCBI) low > 76
Escherichia coli ECOR27 0.20 NOLOHH_22770 bioB biotin synthase BioB 0.42 NOLOHH_03040 ilvN acetolactate synthase small subunit low > 75
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_14135 biotin synthase 0.46 AO356_16175 acetolactate synthase 3 regulatory subunit 0.65 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF671 Biotin synthase (EC 2.8.1.6) 0.42 GFF160 Acetolactate synthase small subunit (EC 2.2.1.6) low > 78
Dickeya dadantii 3937 0.20 DDA3937_RS08510 biotin synthase BioB 0.42 DDA3937_RS18100 acetolactate synthase small subunit low > 74
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_05645 biotin synthase 0.45 CSW01_12560 acetolactate synthase small subunit 0.57 4
Erwinia tracheiphila SCR3 0.20 LU632_RS09130 bioB biotin synthase BioB 0.43 LU632_RS02890 ilvN acetolactate synthase small subunit
Pseudomonas stutzeri RCH2 0.20 Psest_0411 biotin synthetase 0.47 Psest_1037 acetolactate synthase, small subunit 0.46 47
Shewanella amazonensis SB2B 0.20 Sama_1438 biotin synthase (RefSeq) 0.43 Sama_2019 ilvH acetolactate synthase 3 regulatory subunit (RefSeq)
Klebsiella michiganensis M5al 0.20 BWI76_RS08760 biotin synthase 0.42 BWI76_RS04700 acetolactate synthase small subunit low > 92
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.46 PfGW456L13_1539 Acetolactate synthase small subunit (EC 2.2.1.6) 0.78 34
Pseudomonas fluorescens SBW25 0.20 PFLU_RS27650 biotin synthase BioB 0.46 PFLU_RS25645 acetolactate synthase small subunit low > 109
Shewanella sp. ANA-3 0.20 Shewana3_2519 biotin synthase (RefSeq) 0.41 Shewana3_2270 ilvH acetolactate synthase 3 regulatory subunit (RefSeq) low > 73
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS27650 biotin synthase BioB 0.46 PFLU_RS25645 acetolactate synthase small subunit low > 109
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_4687 biotin synthase 0.46 Psyr_0847 acetolactate synthase, small subunit low > 86
Enterobacter asburiae PDN3 0.20 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.42 EX28DRAFT_3674 acetolactate synthase, small subunit (EC 2.2.1.6) low > 76
Dickeya dianthicola 67-19 0.20 HGI48_RS08675 biotin synthase BioB 0.42 HGI48_RS18035 acetolactate synthase small subunit 0.85 16
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_4687 biotin synthase 0.46 Psyr_0847 acetolactate synthase, small subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.20 AO353_07525 biotin synthase 0.46 AO353_14500 acetolactate synthase 3 regulatory subunit 0.67 39
Serratia liquefaciens MT49 0.20 IAI46_06525 biotin synthase BioB 0.45 IAI46_03380 acetolactate synthase small subunit low > 86
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.46 Pf1N1B4_2879 Acetolactate synthase small subunit (EC 2.2.1.6) 0.59 29
Dickeya dianthicola ME23 0.20 DZA65_RS08965 biotin synthase BioB 0.42 DZA65_RS19180 acetolactate synthase small subunit low > 75
Enterobacter sp. TBS_079 0.20 MPMX20_01403 Biotin synthase 0.41 MPMX20_00772 Acetolactate synthase isozyme 3 small subunit low > 85
Pectobacterium carotovorum WPP14 0.19 HER17_RS13460 biotin synthase BioB 0.44 HER17_RS03100 acetolactate synthase small subunit low > 75
Shewanella oneidensis MR-1 0.19 SO2740 bioB biotin synthase (NCBI ptt file) 0.41 SO2278 ilvH acetolactate synthase III, small subunit (NCBI ptt file)
Sphingomonas koreensis DSMZ 15582 0.19 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.41 Ga0059261_0067 acetolactate synthase, small subunit (EC 2.2.1.6) low > 68
Magnetospirillum magneticum AMB-1 0.19 AMB_RS13865 biotin synthase 0.43 AMB_RS17745 acetolactate synthase small subunit
Pantoea sp. MT58 0.19 IAI47_13530 biotin synthase BioB 0.42 IAI47_15985 acetolactate synthase small subunit low > 76
Variovorax sp. SCN45 0.19 GFF937 Biotin synthase (EC 2.8.1.6) 0.51 GFF1159 Acetolactate synthase small subunit (EC 2.2.1.6) low > 127
Shewanella loihica PV-4 0.18 Shew_1719 biotin synthase (RefSeq) 0.42 Shew_1775 acetolactate synthase 3 regulatory subunit (RefSeq)

Not shown: 5 genomes with orthologs for DvMF_1001 only; 13 genomes with orthologs for DvMF_0154 only