Conservation of cofitness between BT1860 and BT1153 in Bacteroides thetaiotaomicron VPI-5482

82 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1860 3-isopropylmalate dehydratase large subunit (NCBI ptt file) 1.0 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.91 3
Bacteroides ovatus ATCC 8483 0.95 BACOVA_04603 3-isopropylmalate dehydratase, large subunit 0.97 BACOVA_04029 phosphoserine transaminase 0.94 29
Bacteroides stercoris CC31F 0.89 HMPREF1181_RS14145 3-isopropylmalate dehydratase large subunit 0.96 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase
Phocaeicola dorei CL03T12C01 0.88 ABI39_RS10200 3-isopropylmalate dehydratase large subunit 0.89 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase 0.86 15
Phocaeicola vulgatus CL09T03C04 0.88 HMPREF1058_RS14550 3-isopropylmalate dehydratase large subunit 0.89 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase 0.78 29
Parabacteroides merdae CL09T00C40 0.85 HMPREF1078_RS16660 3-isopropylmalate dehydratase large subunit 0.69 HMPREF1078_RS15400 3-phosphoserine/phosphohydroxythreonine transaminase 0.96 24
Echinicola vietnamensis KMM 6221, DSM 17526 0.68 Echvi_2059 3-isopropylmalate dehydratase, large subunit 0.07 Echvi_1811 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Pedobacter sp. GW460-11-11-14-LB5 0.65 CA265_RS15830 3-isopropylmalate dehydratase large subunit 0.63 CA265_RS09005 phosphoserine transaminase
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_09435 3-isopropylmalate dehydratase large subunit 0.08 CA264_13325 phosphoserine aminotransferase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.65 ABZR88_RS11595 3-isopropylmalate dehydratase large subunit 0.59 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase
Rahnella sp. WP5 0.52 EX31_RS03690 3-isopropylmalate dehydratase large subunit 0.40 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Pantoea sp. MT58 0.52 IAI47_16010 3-isopropylmalate dehydratase large subunit 0.39 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 49
Marinobacter adhaerens HP15 0.52 HP15_1834 protein containing 3-isopropylmalate dehydratase, large subunit region domain 0.41 HP15_1361 phosphoserine aminotransferase
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.40 Psyr_3646 phosphoserine aminotransferase apoenzyme
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.40 Psyr_3646 phosphoserine aminotransferase apoenzyme
Dickeya dianthicola 67-19 0.52 HGI48_RS18065 3-isopropylmalate dehydratase large subunit 0.40 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase
Dickeya dianthicola ME23 0.52 DZA65_RS19210 3-isopropylmalate dehydratase large subunit 0.40 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Dickeya dadantii 3937 0.51 DDA3937_RS18125 3-isopropylmalate dehydratase large subunit 0.40 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase low > 74
Escherichia fergusonii Becca 0.51 EFB2_03973 3-isopropylmalate dehydratase large subunit 0.40 EFB2_03157 Phosphoserine aminotransferase low > 86
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS17605 3-isopropylmalate dehydratase large subunit 0.41 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.83 22
Pectobacterium carotovorum WPP14 0.51 HER17_RS03075 3-isopropylmalate dehydratase large subunit 0.39 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_1319 3-isopropylmalate dehydratase, large subunit 0.40 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52)
Escherichia coli ECOR38 0.51 HEPCGN_08705 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 85
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14400 isopropylmalate isomerase 0.39 RR42_RS04455 MFS transporter
Escherichia coli ECOR27 0.51 NOLOHH_03070 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 57
Escherichia coli BL21 0.51 ECD_00074 3-isopropylmalate dehydratase large subunit 0.40 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.51 47
Escherichia coli ECRC62 0.51 BNILDI_08540 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Escherichia coli BW25113 0.51 b0072 leuC isopropylmalate isomerase large subunit (NCBI) 0.40 b0907 serC phosphoserine aminotransferase (NCBI) 0.86 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03585 3-isopropylmalate dehydratase large subunit 0.40 OHPLBJKB_02761 Phosphoserine aminotransferase
Escherichia coli Nissle 1917 0.51 ECOLIN_RS00390 3-isopropylmalate dehydratase large subunit 0.40 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Serratia liquefaciens MT49 0.51 IAI46_03345 3-isopropylmalate dehydratase large subunit 0.37 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase 0.63 47
Escherichia coli ECRC98 0.51 JDDGAC_14320 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Escherichia coli ECRC101 0.51 MCAODC_01240 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Escherichia coli ECRC102 0.51 NIAGMN_08575 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Escherichia coli ECRC101 0.51 OKFHMN_10725 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Escherichia coli ECRC99 0.51 KEDOAH_17430 leuC1 3-isopropylmalate dehydratase large subunit 1 0.40 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS14540 3-isopropylmalate dehydratase large subunit 0.41 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase 0.87 14
Mycobacterium tuberculosis H37Rv 0.51 Rv2988c Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) 0.11 Rv0884c Possible phosphoserine aminotransferase SerC (PSAT)
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF166 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.39 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_06075 3-isopropylmalate dehydratase, large subunit 0.41 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme 0.60 19
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3668 3-isopropylmalate dehydratase, large subunit 0.38 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52)
Castellaniella sp019104865 MT123 0.51 ABCV34_RS04290 3-isopropylmalate dehydratase large subunit 0.38 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase
Pseudomonas simiae WCS417 0.51 PS417_18600 isopropylmalate isomerase 0.40 PS417_08120 MFS transporter
Shewanella loihica PV-4 0.51 Shew_3470 isopropylmalate isomerase large subunit (RefSeq) 0.38 Shew_1950 phosphoserine aminotransferase (RefSeq)
Shewanella oneidensis MR-1 0.51 SO4234 leuC 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) 0.38 SO2410 serC phosphoserine aminotransferase (NCBI ptt file)
Alteromonas macleodii MIT1002 0.51 MIT1002_00947 3-isopropylmalate dehydratase large subunit 0.37 MIT1002_02192 Phosphoserine aminotransferase
Shewanella sp. ANA-3 0.51 Shewana3_3759 isopropylmalate isomerase large subunit (RefSeq) 0.38 Shewana3_1973 phosphoserine aminotransferase (RefSeq)
Ralstonia solanacearum GMI1000 0.50 RS_RS10000 3-isopropylmalate dehydratase large subunit 0.41 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.39 28
Pseudomonas sp. RS175 0.50 PFR28_02824 3-isopropylmalate dehydratase large subunit 0.41 PFR28_00906 Phosphoserine aminotransferase
Enterobacter sp. TBS_079 0.50 MPMX20_00767 3-isopropylmalate dehydratase large subunit 1 0.39 MPMX20_01566 Phosphoserine aminotransferase 0.88 32
Paraburkholderia graminis OAS925 0.50 ABIE53_004801 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit 0.33 ABIE53_003159 phosphoserine aminotransferase 0.90 9
Acidovorax sp. GW101-3H11 0.50 Ac3H11_1525 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.42 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52)
Pseudomonas fluorescens SBW25 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.40 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase
Ralstonia solanacearum UW163 0.50 UW163_RS11105 3-isopropylmalate dehydratase large subunit 0.41 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS20580 3-isopropylmalate dehydratase large subunit 0.40 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS02620 3-isopropylmalate dehydratase large subunit 0.41 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase 0.63 14
Erwinia tracheiphila SCR3 0.50 LU632_RS02870 leuC 3-isopropylmalate dehydratase large subunit 0.39 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF3363 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.39 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52)
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_21400 isopropylmalate isomerase 0.41 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase
Pseudomonas stutzeri RCH2 0.50 Psest_2591 3-isopropylmalate dehydratase, large subunit 0.41 Psest_1983 phosphoserine aminotransferase
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33915 isopropylmalate isomerase 0.41 BPHYT_RS14915 phosphoserine aminotransferase 0.90 17
Klebsiella michiganensis M5al 0.50 BWI76_RS04670 3-isopropylmalate dehydratase large subunit 0.39 BWI76_RS09755 phosphoserine transaminase 0.84 40
Ralstonia solanacearum PSI07 0.50 RPSI07_RS14695 3-isopropylmalate dehydratase large subunit 0.41 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase 0.68 16
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_15 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.33 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52)
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_63 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.41 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52)
Lysobacter sp. OAE881 0.50 ABIE51_RS17575 3-isopropylmalate dehydratase large subunit 0.37 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase 0.93 24
Pseudomonas putida KT2440 0.50 PP_1985 3-isopropylmalate dehydratase large subunit 0.42 PP_1768 phosphoserine aminotransferase
Acinetobacter radioresistens SK82 0.50 MPMX26_00345 3-isopropylmalate dehydratase large subunit 0.41 MPMX26_02219 Phosphoserine aminotransferase
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_3948 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.41 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52)
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_20620 isopropylmalate isomerase 0.41 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase 0.87 24
Shewanella amazonensis SB2B 0.50 Sama_0337 isopropylmalate isomerase large subunit (RefSeq) 0.37 Sama_1732 phosphoserine aminotransferase (RefSeq)
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS16515 isopropylmalate isomerase 0.43 HSERO_RS18435 MFS transporter
Pseudomonas sp. S08-1 0.50 OH686_04480 3-isopropylmalate dehydratase large subunit 0.41 OH686_20865 phosphoserine transaminase
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.1049.1 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.34 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.86 20
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_12605 3-isopropylmalate dehydratase large subunit 0.38 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase
Dechlorosoma suillum PS 0.49 Dsui_3201 3-isopropylmalate dehydratase, large subunit 0.40 Dsui_1939 phosphoserine aminotransferase
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS10335 3-isopropylmalate dehydratase large subunit 0.37 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase 0.73 38
Rhodanobacter denitrificans MT42 0.49 LRK55_RS09975 3-isopropylmalate dehydratase large subunit 0.37 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase low > 63
Variovorax sp. SCN45 0.49 GFF3890 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 0.39 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52)
Variovorax sp. OAS795 0.49 ABID97_RS08465 3-isopropylmalate dehydratase large subunit 0.36 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase
Bifidobacterium breve UCC2003 0.48 BBR_RS19630 3-isopropylmalate dehydratase large subunit 0.09 BBR_RS18570 phosphoserine transaminase low > 34
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS15960 3-isopropylmalate dehydratase large subunit 0.37 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.92 48
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_13585 leuC 3-isopropylmalate dehydratase large subunit 0.37 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 52

Not shown: 20 genomes with orthologs for BT1860 only; 0 genomes with orthologs for BT1153 only