Conservation of cofitness between b2290 and b3770 in Escherichia coli BW25113

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2290 yfbQ aspartate aminotransferase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.56 19
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01415 Glutamate-pyruvate aminotransferase AlaA 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia fergusonii Becca 1.00 EFB2_01568 Glutamate-pyruvate aminotransferase AlaA 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_14445 alaA alanine transaminase AlaA 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC62 1.00 BNILDI_13365 alaA alanine transaminase AlaA 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13295 alanine transaminase AlaA 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli BL21 1.00 ECD_02215 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase 1.00 ECD_03648 branched-chain amino acid aminotransferase low > 60
Escherichia coli ECOR38 1.00 HEPCGN_22030 alaA alanine transaminase AlaA 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia coli ECRC102 1.00 NIAGMN_20595 alaA alanine transaminase AlaA 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 OKFHMN_22825 alaA alanine transaminase AlaA 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 1.00 MCAODC_13865 alaA alanine transaminase AlaA 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC99 1.00 KEDOAH_05370 alaA alanine transaminase AlaA 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC98 1.00 JDDGAC_26790 alaA alanine transaminase AlaA 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1894 Aspartate aminotransferase (EC 2.6.1.1) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Klebsiella michiganensis M5al 0.97 BWI76_RS20205 aminotransferase AlaT 0.97 BWI76_RS00970 branched chain amino acid aminotransferase 0.23 26
Enterobacter asburiae PDN3 0.97 EX28DRAFT_0319 Aspartate/tyrosine/aromatic aminotransferase 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I low > 76
Enterobacter sp. TBS_079 0.96 MPMX20_03220 Glutamate-pyruvate aminotransferase AlaA 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Pantoea sp. MT58 0.93 IAI47_06350 pyridoxal phosphate-dependent aminotransferase 0.91 IAI47_01030 branched-chain amino acid transaminase 0.41 49
Dickeya dadantii 3937 0.93 DDA3937_RS14345 pyridoxal phosphate-dependent aminotransferase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase low > 74
Dickeya dianthicola ME23 0.93 DZA65_RS14995 pyridoxal phosphate-dependent aminotransferase 0.91 DZA65_RS21340 branched-chain amino acid transaminase low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS14320 pyridoxal phosphate-dependent aminotransferase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase 0.45 26
Pectobacterium carotovorum WPP14 0.91 HER17_RS07115 pyridoxal phosphate-dependent aminotransferase 0.90 HER17_RS01070 branched-chain amino acid transaminase low > 75
Serratia liquefaciens MT49 0.91 IAI46_17720 pyridoxal phosphate-dependent aminotransferase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Erwinia tracheiphila SCR3 0.91 LU632_RS07955 pyridoxal phosphate-dependent aminotransferase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.85 10
Rahnella sp. WP5 0.88 EX31_RS19445 pyridoxal phosphate-dependent aminotransferase 0.90 EX31_RS15000 branched-chain amino acid transaminase 0.58 68
Vibrio cholerae E7946 ATCC 55056 0.81 CSW01_09870 pyridoxal phosphate-dependent aminotransferase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_2446 Aspartate aminotransferase (EC 2.6.1.1) 0.21 Pf6N2E2_477 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 103
Pseudomonas putida KT2440 0.75 PP_1872 glutamate-pyruvate aminotransferase 0.19 PP_3511 Branched-chain-amino-acid aminotransferase 0.17 85
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_2252 Aspartate aminotransferase (EC 2.6.1.1) 0.27 PfGW456L13_4923 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas sp. RS175 0.75 PFR28_00984 Glutamate-pyruvate aminotransferase AlaA 0.21 PFR28_02449 putative branched-chain-amino-acid aminotransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_03090 aminotransferase 0.21 AO356_22970 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_19150 aminotransferase 0.20 AO353_26655 branched-chain amino acid aminotransferase low > 101
Pseudomonas fluorescens FW300-N1B4 0.74 Pf1N1B4_261 Aspartate aminotransferase (EC 2.6.1.1) 0.22 Pf1N1B4_4476 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 87
Pseudomonas sp. S08-1 0.74 OH686_22575 Alanine transaminase 0.46 OH686_09695 branched-chain amino acid aminotransferase low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_1772 Aspartate/tyrosine/aromatic aminotransferase 0.46 Psest_0450 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 67
Pseudomonas fluorescens SBW25 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas simiae WCS417 0.74 PS417_08560 aminotransferase 0.21 PS417_17565 branched-chain amino acid aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.74 PFLU_RS08510 pyridoxal phosphate-dependent aminotransferase 0.21 PFLU_RS19375 branched-chain amino acid aminotransferase low > 109
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3615 Aminotransferase, class I and II 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.42 50
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3615 Aminotransferase, class I and II 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Shewanella oneidensis MR-1 0.73 SO2483 aspartate aminotransferase, putative (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.51 4
Shewanella loihica PV-4 0.73 Shew_1914 aminotransferase AlaT (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.73 Sama_1697 aminotransferase AlaT (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.71 5
Shewanella sp. ANA-3 0.72 Shewana3_2145 aminotransferase AlaT (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.73 3
Marinobacter adhaerens HP15 0.68 HP15_2095 aspartate aminotransferase 0.43 HP15_436 branched-chain-amino-acid aminotransferase — —
Dechlorosoma suillum PS 0.68 Dsui_2908 aspartate/tyrosine/aromatic aminotransferase 0.47 Dsui_2030 branched-chain amino acid aminotransferase, group I low > 51
Ralstonia solanacearum GMI1000 0.67 RS_RS06650 pyridoxal phosphate-dependent aminotransferase 0.45 RS_RS02840 branched-chain amino acid transaminase low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS12545 aminotransferase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS11440 pyridoxal phosphate-dependent aminotransferase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Acinetobacter radioresistens SK82 0.67 MPMX26_01871 Glutamate-pyruvate aminotransferase AlaA 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase 0.70 19
Ralstonia solanacearum UW163 0.67 UW163_RS13315 pyridoxal phosphate-dependent aminotransferase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS15870 pyridoxal phosphate-dependent aminotransferase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase low > 76
Ralstonia solanacearum PSI07 0.66 RPSI07_RS17495 pyridoxal phosphate-dependent aminotransferase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase low > 81
Acidovorax sp. GW101-3H11 0.66 Ac3H11_1508 Aspartate aminotransferase (EC 2.6.1.1) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Alteromonas macleodii MIT1002 0.66 MIT1002_02306 Glutamate-pyruvate aminotransferase AlaA 0.17 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.80 29
Herbaspirillum seropedicae SmR1 0.66 HSERO_RS10455 aminotransferase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS08950 aminotransferase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Variovorax sp. OAS795 0.66 ABID97_RS10885 pyridoxal phosphate-dependent aminotransferase 0.44 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS22410 pyridoxal phosphate-dependent aminotransferase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF3934 Aspartate aminotransferase (EC 2.6.1.1) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Paraburkholderia bryophila 376MFSha3.1 0.65 H281DRAFT_00809 alanine-synthesizing transaminase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Paraburkholderia graminis OAS925 0.65 ABIE53_002025 alanine-synthesizing transaminase 0.43 ABIE53_003432 branched-chain amino acid aminotransferase low > 113
Variovorax sp. SCN45 0.65 GFF2803 Alanine transaminase (EC 2.6.1.2) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Mycobacterium tuberculosis H37Rv 0.63 Rv0337c Probable aspartate aminotransferase AspC (transaminase A) (ASPAT) 0.19 Rv2210c Branched-chain amino acid transaminase IlvE — —
Bifidobacterium breve UCC2003 0.63 BBR_RS15560 aminotransferase class V-fold PLP-dependent enzyme 0.17 BBR_RS15210 branched-chain amino acid aminotransferase low > 34
Pontibacter actiniarum KMM 6156, DSM 19842 0.61 CA264_06065 aminotransferase 0.32 CA264_06940 branched-chain amino acid aminotransferase low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS18840 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.55 ABIE51_RS16505 branched-chain amino acid transaminase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1010.1 Aspartate aminotransferase (EC 2.6.1.1) 0.19 Xcc-8004.4199.1 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.66 64
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_12720 aspB aminotransferase 0.56 OKGIIK_11840 ilvE branched-chain amino acid transaminase low > 52
Rhodanobacter denitrificans MT42 0.39 LRK55_RS10860 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.56 LRK55_RS11755 branched-chain amino acid transaminase 0.66 28
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS11155 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.56 LRK54_RS12020 branched-chain amino acid transaminase low > 59
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS12435 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.56 ABZR86_RS15965 branched-chain amino acid transaminase 0.77 13
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS04680 pyridoxal phosphate-dependent aminotransferase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Rhodopseudomonas palustris CGA009 0.19 TX73_022440 pyridoxal phosphate-dependent aminotransferase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Azospirillum sp. SherDot2 0.19 MPMX19_02392 Aspartate/prephenate aminotransferase 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase low > 112
Rhizobium sp. OAE497 0.18 ABIE40_RS12925 pyridoxal phosphate-dependent aminotransferase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase low > 107
Azospirillum brasilense Sp245 0.18 AZOBR_RS12970 aspartate aminotransferase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.18 CCNA_01603 aspartate aminotransferase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Caulobacter crescentus NA1000 0.18 CCNA_01603 aspartate aminotransferase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Dinoroseobacter shibae DFL-12 0.17 Dshi_0762 aminotransferase class I and II (RefSeq) 0.26 Dshi_3301 branched-chain amino acid aminotransferase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.17 Ga0059261_2226 Aspartate/tyrosine/aromatic aminotransferase 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II 0.99 12
Magnetospirillum magneticum AMB-1 0.17 AMB_RS02875 pyridoxal phosphate-dependent aminotransferase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —

Not shown: 1 genomes with orthologs for b2290 only; 21 genomes with orthologs for b3770 only