Conservation of cofitness between b2616 and b3935 in Escherichia coli BW25113

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2616 recN recombination and repair protein (NCBI) 1.0 b3935 priA primosome assembly protein PriA (NCBI) 0.48 10
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01091 DNA repair protein RecN 1.00 OHPLBJKB_04116 'Primosomal protein N'' transl_table=11 — —
Escherichia coli ECRC62 1.00 BNILDI_11620 recN DNA repair protein RecN 0.99 BNILDI_05665 priA primosomal protein N' — —
Escherichia coli ECOR27 1.00 NOLOHH_12815 recN DNA repair protein RecN 0.99 NOLOHH_05865 priA primosomal protein N' — —
Escherichia coli BL21 1.00 ECD_02504 recombination and repair protein 1.00 ECD_03820 Primosome factor n — —
Escherichia coli ECRC101 0.99 MCAODC_11670 recN DNA repair protein RecN 0.99 MCAODC_04220 priA primosomal protein N' — —
Escherichia coli ECRC102 0.99 NIAGMN_18915 recN DNA repair protein RecN 0.99 NIAGMN_11475 priA primosomal protein N' — —
Escherichia coli ECRC99 0.99 KEDOAH_07075 recN DNA repair protein RecN 0.99 KEDOAH_14440 priA primosomal protein N' — —
Escherichia coli ECRC101 0.99 OKFHMN_21145 recN DNA repair protein RecN 0.99 OKFHMN_13720 priA primosomal protein N' — —
Escherichia coli ECOR38 0.99 HEPCGN_20265 recN DNA repair protein RecN 0.99 HEPCGN_12365 priA primosomal protein N' — —
Escherichia fergusonii Becca 0.99 EFB2_01277 DNA repair protein RecN 0.99 EFB2_04683 Primosomal protein N' — —
Escherichia coli ECRC98 0.99 JDDGAC_24810 recN DNA repair protein RecN 0.99 JDDGAC_17345 priA primosomal protein N' — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14775 DNA repair protein RecN 0.99 ECOLIN_RS22655 primosomal protein N' — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4162 DNA repair protein RecN 0.93 GFF2317 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2719 DNA repair protein RecN 0.91 EX28DRAFT_4408 replication restart DNA helicase PriA — —
Enterobacter sp. TBS_079 0.85 MPMX20_03486 DNA repair protein RecN 0.90 MPMX20_04534 Primosomal protein N' — —
Klebsiella michiganensis M5al 0.84 BWI76_RS21560 DNA repair protein RecN 0.90 BWI76_RS00770 primosomal protein N' — —
Serratia liquefaciens MT49 0.77 IAI46_19635 DNA repair protein RecN 0.74 IAI46_24555 primosomal protein N' — —
Pantoea sp. MT58 0.77 IAI47_04810 DNA repair protein RecN 0.72 IAI47_00865 primosomal protein N' — —
Rahnella sp. WP5 0.75 EX31_RS21760 DNA repair protein RecN 0.76 EX31_RS14225 primosomal protein N' — —
Dickeya dadantii 3937 0.73 DDA3937_RS04325 DNA repair protein RecN 0.73 DDA3937_RS00935 primosomal protein N' — —
Erwinia tracheiphila SCR3 0.73 LU632_RS16985 recN DNA repair protein RecN 0.72 LU632_RS19655 priA primosomal protein N' — —
Dickeya dianthicola 67-19 0.72 HGI48_RS04320 DNA repair protein RecN 0.73 HGI48_RS20440 primosomal protein N' — —
Dickeya dianthicola ME23 0.72 DZA65_RS04235 DNA repair protein RecN 0.73 DZA65_RS21485 primosomal protein N' — —
Pectobacterium carotovorum WPP14 0.72 HER17_RS17420 DNA repair protein RecN 0.73 HER17_RS00870 primosomal protein N' — —
Shewanella oneidensis MR-1 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.48 SO4122 priA primosomal protein N' (NCBI ptt file) — —
Shewanella sp. ANA-3 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.49 Shewana3_3672 primosomal protein N' (RefSeq) — —
Shewanella amazonensis SB2B 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.46 Sama_0445 primosomal protein N' (RefSeq) — —
Shewanella loihica PV-4 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.47 Shew_0379 primosomal protein N' (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_04395 DNA repair protein RecN 0.52 CSW01_13530 primosomal protein N' — —
Alteromonas macleodii MIT1002 0.43 MIT1002_01443 Recombination protein N 0.45 MIT1002_03665 Primosomal protein N' — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_5106 DNA repair protein RecN 0.45 PfGW456L13_286 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Marinobacter adhaerens HP15 0.40 HP15_3084 DNA repair protein RecN 0.41 HP15_470 primosome assembly protein PriA — —
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.46 Pf6N2E2_3766 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Pseudomonas sp. S08-1 0.39 OH686_17050 DNA repair protein RecN 0.47 OH686_10080 primosomal protein N' — —
Pseudomonas simiae WCS417 0.39 PS417_24070 recombination and repair protein 0.46 PS417_01935 primosomal protein N' — —
Pseudomonas sp. RS175 0.39 PFR28_00071 DNA repair protein RecN 0.46 PFR28_05002 'Primosomal protein N'' transl_table=11 — —
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS25910 DNA repair protein RecN 0.46 PFLU_RS01980 primosomal protein N' — —
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_07510 DNA repair protein RecN 0.45 AO356_09440 primosomal protein N' — —
Pseudomonas fluorescens SBW25 0.38 PFLU_RS25910 DNA repair protein RecN 0.46 PFLU_RS01980 primosomal protein N' — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_05660 DNA repair protein RecN 0.45 AO353_12445 primosomal protein N' — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4197 DNA replication and repair protein RecN 0.47 Psyr_0398 replication restart DNA helicase PriA — —
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4197 DNA replication and repair protein RecN 0.47 Psyr_0398 replication restart DNA helicase PriA — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS03060 DNA repair protein 0.28 HSERO_RS21775 primosome assembly protein PriA — —
Pseudomonas stutzeri RCH2 0.38 Psest_0962 DNA repair protein RecN 0.48 Psest_3724 primosomal protein N' — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS26535 DNA repair protein RecN 0.31 QEN71_RS29260 primosomal protein N' low > 153
Pseudomonas putida KT2440 0.37 PP_4729 factor used in recombination and DNA repair 0.46 PP_5088 primosome assembly protein — —
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0601 DNA replication and repair protein RecN 0.48 B158DRAFT_0750 replication restart DNA helicase PriA 0.57 18
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS01065 DNA repair protein RecN 0.31 ABZR87_RS03975 primosomal protein N' — —
Ralstonia solanacearum PSI07 0.36 RPSI07_RS11890 DNA repair protein RecN 0.29 RPSI07_RS08535 primosomal protein N' — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS05415 DNA repair protein RecN 0.30 RALBFv3_RS08730 primosomal protein N' — —
Ralstonia solanacearum UW163 0.36 UW163_RS08210 DNA repair protein RecN 0.30 UW163_RS04880 primosomal protein N' — —
Paraburkholderia graminis OAS925 0.35 ABIE53_000856 DNA repair protein RecN (Recombination protein N) 0.31 ABIE53_000246 primosomal protein N — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS05910 DNA repair protein 0.32 RR42_RS20130 primosome assembly protein PriA — —
Ralstonia solanacearum GMI1000 0.35 RS_RS13275 DNA repair protein RecN 0.29 RS_RS16545 primosomal protein N' — —
Burkholderia phytofirmans PsJN 0.35 BPHYT_RS03560 DNA repair protein 0.31 BPHYT_RS19360 primosome assembly protein PriA — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_04692 DNA replication and repair protein RecN 0.32 H281DRAFT_02402 replication restart DNA helicase PriA — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS05665 DNA repair protein RecN 0.39 ABZR86_RS12535 primosomal protein N' — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS07470 DNA repair protein RecN 0.28 ABCV34_RS11070 primosomal protein N' — —
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_07340 recN DNA repair protein RecN 0.37 OKGIIK_12800 priA primosomal protein N' — —
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS17960 DNA repair protein RecN 0.38 LRK54_RS11075 primosomal protein N' — —
Rhodanobacter denitrificans MT42 0.33 LRK55_RS17815 DNA repair protein RecN 0.38 LRK55_RS10780 primosomal protein N' — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF829 DNA repair protein RecN 0.27 GFF1770 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Variovorax sp. SCN45 0.32 GFF2357 DNA repair protein RecN 0.29 GFF5837 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Lysobacter sp. OAE881 0.31 ABIE51_RS11655 DNA repair protein RecN 0.41 ABIE51_RS02145 primosomal protein N' — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3431.1 DNA repair protein RecN 0.37 Xcc-8004.4763.1 Helicase PriA essential for oriC/DnaA-independent DNA replication — —
Acinetobacter radioresistens SK82 0.29 MPMX26_00239 DNA repair protein RecN 0.40 MPMX26_00282 Primosomal protein N' — —
Magnetospirillum magneticum AMB-1 0.27 AMB_RS19520 DNA repair protein RecN 0.24 AMB_RS21500 primosomal protein N' — —
Sinorhizobium meliloti 1021 0.27 SMc01877 DNA repair protein 0.25 SMc02496 primosome assembly protein PriA — —
Agrobacterium fabrum C58 0.26 Atu2083 DNA repair protein RecN 0.24 Atu2627 primosomal protein N' — —
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_1026 DNA repair protein RecN 0.26 Ga0059261_1421 replication restart DNA helicase PriA — —
Bosea sp. OAE506 0.24 ABIE41_RS12645 DNA repair protein RecN 0.22 ABIE41_RS07880 primosomal protein N' 0.37 60
Azospirillum brasilense Sp245 0.24 AZOBR_RS12395 DNA repair protein RecN 0.26 AZOBR_RS03980 primosome assembly protein PriA — —
Rhodospirillum rubrum S1H 0.24 Rru_A0940 DNA repair protein RecN (NCBI) 0.26 Rru_A1222 Primosomal protein n (NCBI) — —
Phaeobacter inhibens DSM 17395 0.24 PGA1_c09720 DNA repair protein RecN 0.25 PGA1_c05790 primosomal protein N — —
Rhodopseudomonas palustris CGA009 0.24 TX73_018240 DNA repair protein RecN 0.24 TX73_000940 primosomal protein N' — —
Dinoroseobacter shibae DFL-12 0.24 Dshi_2413 DNA repair protein RecN (RefSeq) 0.26 Dshi_1926 primosomal protein N' (RefSeq) — —
Azospirillum sp. SherDot2 0.24 MPMX19_01601 DNA repair protein RecN 0.27 MPMX19_02107 Primosomal protein N' — —
Brevundimonas sp. GW460-12-10-14-LB2 0.22 A4249_RS02620 DNA repair protein RecN 0.21 A4249_RS12195 primosomal protein N' — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_02062 DNA repair protein recN 0.24 CCNA_00351 primosomal protein N' — —
Caulobacter crescentus NA1000 0.21 CCNA_02062 DNA repair protein recN 0.24 CCNA_00351 primosomal protein N' — —
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU2463 recN DNA repair protein RecN (TIGR) 0.23 DVU1284 priA primosomal protein n (TIGR) — —

Not shown: 18 genomes with orthologs for b2616 only; 2 genomes with orthologs for b3935 only