Conservation of cofitness between Rru_A3641 and Rru_A2837 in Rhodospirillum rubrum S1H

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodospirillum rubrum S1H 1.0 Rru_A3641 Ribonuclease PH (NCBI) 1.0 Rru_A2837 Response regulator receiver domain protein (CheY) (NCBI) 0.66 1
Azospirillum brasilense Sp245 0.76 AZOBR_RS02205 ribonuclease PH 0.72 AZOBR_RS12415 chemotaxis protein CheY low > 97
Magnetospirillum magneticum AMB-1 0.74 AMB_RS22760 ribonuclease PH 0.86 AMB_RS17710 response regulator low > 64
Azospirillum sp. SherDot2 0.74 MPMX19_02576 Ribonuclease PH 0.70 MPMX19_01605 Chemotaxis protein CheY low > 112
Sinorhizobium meliloti 1021 0.67 SMc01144 ribonuclease PH 0.33 SMc03011 chemotaxis regulator protein — —
Rhizobium sp. OAE497 0.66 ABIE40_RS01640 ribonuclease PH 0.33 ABIE40_RS02895 response regulator low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.66 A4249_RS13125 ribonuclease PH 0.37 A4249_RS15585 response regulator low > 48
Agrobacterium fabrum C58 0.66 Atu0327 ribonuclease PH 0.32 Atu0520 chemotaxis receiver protein — —
Bosea sp. OAE506 0.64 ABIE41_RS03295 ribonuclease PH 0.69 ABIE41_RS23275 response regulator low > 77
Caulobacter crescentus NA1000 0.64 CCNA_00151 ribonuclease PH 0.67 CCNA_00628 chemotaxis protein cheY low > 66
Caulobacter crescentus NA1000 Δfur 0.64 CCNA_00151 ribonuclease PH 0.67 CCNA_00628 chemotaxis protein cheY low > 67
Rhodopseudomonas palustris CGA009 0.63 TX73_001710 ribonuclease PH 0.73 TX73_006030 response regulator low > 86
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS03345 ribonuclease PH 0.49 RALBFv3_RS17420 chemotaxis protein CheY low > 76
Ralstonia solanacearum UW163 0.62 UW163_RS10375 ribonuclease PH 0.49 UW163_RS21730 chemotaxis protein CheY — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS04890 ribonuclease PH 0.55 RR42_RS35780 chemotaxis protein CheY low > 128
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS03645 ribonuclease PH 0.58 QEN71_RS28980 chemotaxis response regulator CheY 0.77 83
Dechlorosoma suillum PS 0.61 Dsui_0494 ribonuclease PH 0.57 Dsui_1719 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 51
Ralstonia solanacearum GMI1000 0.61 RS_RS10830 ribonuclease PH 0.49 RS_RS23890 chemotaxis protein CheY — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS15255 ribonuclease PH 0.50 ABZR87_RS17995 chemotaxis response regulator CheY low > 80
Ralstonia solanacearum PSI07 0.60 RPSI07_RS13840 ribonuclease PH 0.49 RPSI07_RS06225 chemotaxis protein CheY — —
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS15325 ribonuclease PH 0.57 BPHYT_RS18965 chemotaxis protein CheY low > 109
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04008 RNAse PH 0.57 H281DRAFT_05748 response regulator receiver protein low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.59 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.48 GFF1435 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY — —
Paraburkholderia graminis OAS925 0.59 ABIE53_003234 ribonuclease PH 0.57 ABIE53_000118 two-component system chemotaxis response regulator CheY low > 113
Phaeobacter inhibens DSM 17395 0.59 PGA1_c35030 ribonuclease PH 0.27 PGA1_262p02090 response regulator receiver domain-containing protein low > 62
Pseudomonas simiae WCS417 0.59 PS417_27810 ribonuclease PH 0.53 PS417_19690 histidine kinase low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS29490 ribonuclease PH 0.53 PFLU_RS21655 response regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS29490 ribonuclease PH 0.53 PFLU_RS21655 response regulator low > 109
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS10655 ribonuclease PH 0.53 HSERO_RS10130 chemotaxis protein CheY — —
Pseudomonas putida KT2440 0.58 PP_5294 Ribonuclease PH 0.56 PP_4340 response regulator for chemotactic signal transduction low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_0213 RNAse PH 0.56 Psyr_3436 Response regulator receiver 0.40 25
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_0213 RNAse PH 0.56 Psyr_3436 Response regulator receiver low > 86
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.54 Pf1N1B4_3627 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 87
Xanthomonas campestris pv. campestris strain 8004 0.58 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.55 Xcc-8004.2833.1 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 74
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_01115 ribonuclease PH 0.54 CSW01_10330 chemotaxis protein CheY low > 62
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.57 Pf6N2E2_2572 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 103
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS11900 ribonuclease PH 0.50 ABZR86_RS20270 chemotaxis response regulator CheY low > 74
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.55 PfGW456L13_4330 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 87
Variovorax sp. SCN45 0.57 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.54 GFF5768 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY — —
Pseudomonas sp. S08-1 0.57 OH686_13570 ribonuclease PH 0.56 OH686_02725 Chemotaxis regulator - transmits chemoreceptor signals to flagellar motor components CheY low > 80
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_12500 ribonuclease PH 0.57 AO356_03725 histidine kinase low > 104
Pseudomonas sp. RS175 0.57 PFR28_04420 Ribonuclease PH 0.53 PFR28_00853 Chemotaxis protein CheY low > 88
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_09260 ribonuclease PH 0.54 AO353_18790 histidine kinase low > 101
Shewanella sp. ANA-3 0.56 Shewana3_3777 RNAse PH (RefSeq) 0.57 Shewana3_1360 response regulator receiver protein (RefSeq) — —
Dickeya dadantii 3937 0.56 DDA3937_RS20540 ribonuclease PH 0.58 DDA3937_RS13520 chemotaxis response regulator CheY low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS00675 ribonuclease PH 0.58 HGI48_RS13565 chemotaxis response regulator CheY low > 71
Dickeya dianthicola ME23 0.56 DZA65_RS00730 ribonuclease PH 0.58 DZA65_RS14050 chemotaxis protein CheY low > 75
Shewanella oneidensis MR-1 0.56 SO4256 rph ribonuclease PH (NCBI ptt file) 0.57 SO3209 cheY-3 chemotaxis protein CheY (NCBI ptt file) low > 76
Escherichia coli ECRC98 0.56 JDDGAC_19215 rph ribonuclease PH 0.58 JDDGAC_00730 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECOR38 0.56 HEPCGN_14410 rph ribonuclease PH 0.58 HEPCGN_04575 cheY chemotaxis regulatory protein CheY low > 87
Escherichia coli ECRC102 0.56 NIAGMN_13350 rph ribonuclease PH 0.58 NIAGMN_01905 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECOR27 0.56 NOLOHH_07470 rph ribonuclease PH 0.58 NOLOHH_16595 cheY chemotaxis regulatory protein CheY low > 75
Escherichia coli ECRC62 0.56 BNILDI_04045 rph ribonuclease PH 0.58 BNILDI_15385 cheY chemotaxis regulatory protein CheY low > 75
Escherichia coli ECRC100 0.56 OKFHMN_15590 rph ribonuclease PH 0.58 OKFHMN_26155 cheY chemotaxis regulatory protein CheY — —
Escherichia coli ECRC99 0.56 KEDOAH_12555 rph ribonuclease PH 0.58 KEDOAH_01950 cheY chemotaxis regulatory protein CheY — —
Escherichia fergusonii Becca 0.56 EFB2_00170 Ribonuclease PH 0.58 EFB2_02061 Chemotaxis protein CheY low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_00059 Ribonuclease PH 0.58 OHPLBJKB_01846 Chemotaxis protein CheY low > 73
Escherichia coli Nissle 1917 0.56 ECOLIN_RS20755 ribonuclease PH 0.58 ECOLIN_RS10750 chemotaxis response regulator CheY — —
Escherichia coli ECRC101 0.56 MCAODC_06100 rph ribonuclease PH 0.58 MCAODC_19250 cheY chemotaxis regulatory protein CheY — —
Escherichia coli BL21 0.56 ECD_03500 ribonuclease PH 0.58 ECD_01853 chemotaxis regulator transmitting signal to flagellar motor component — —
Pseudomonas stutzeri RCH2 0.56 Psest_3813 ribonuclease PH 0.54 Psest_1741 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 67
Shewanella amazonensis SB2B 0.56 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.56 Sama_2279 response regulator receiver protein (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.56 ABCV34_RS03515 ribonuclease PH 0.55 ABCV34_RS05810 chemotaxis response regulator CheY low > 48
Marinobacter adhaerens HP15 0.56 HP15_300 ribonuclease PH 0.56 HP15_2301 response regulator receiver domain protein (CheY-) low > 73
Shewanella loihica PV-4 0.56 Shew_3488 ribonuclease PH (RefSeq) 0.56 Shew_1384 response regulator receiver protein (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.56 GFF1663 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 78
Alteromonas macleodii MIT1002 0.56 MIT1002_04071 Ribonuclease PH 0.56 MIT1002_01104 Chemotaxis protein CheY low > 70
Enterobacter sp. TBS_079 0.55 MPMX20_00092 Ribonuclease PH 0.57 MPMX20_02786 Chemotaxis protein CheY low > 85
Lysobacter sp. OAE881 0.55 ABIE51_RS17285 ribonuclease PH 0.49 ABIE51_RS16870 chemotaxis response regulator CheY low > 62
Rhodanobacter denitrificans MT42 0.55 LRK55_RS11470 ribonuclease PH 0.53 LRK55_RS13325 chemotaxis response regulator CheY low > 63
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3893 ribonuclease PH 0.56 EX28DRAFT_0674 Response regulator receiver domain low > 76
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS11745 ribonuclease PH 0.53 LRK54_RS13585 chemotaxis response regulator CheY low > 59
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_12150 rph ribonuclease PH 0.51 OKGIIK_02835 cheY chemotaxis response regulator CheY — —
Acidovorax sp. GW101-3H11 0.55 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.45 Ac3H11_1387 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY low > 79
Pantoea sp. MT58 0.54 IAI47_00595 ribonuclease PH 0.57 IAI47_08335 chemotaxis response regulator CheY low > 76
Escherichia coli BW25113 0.53 b3643 rph ribonuclease PH (NCBI) 0.58 b1882 cheY chemotaxis regulator transmitting signal to flagellar motor component (NCBI) low > 76
Erwinia tracheiphila SCR3 0.53 LU632_RS22020 rph ribonuclease PH 0.57 LU632_RS13520 cheY chemotaxis response regulator CheY low > 74
Serratia liquefaciens MT49 0.53 IAI46_24850 ribonuclease PH 0.57 IAI46_16010 chemotaxis response regulator CheY low > 86
Rahnella sp. WP5 0.53 EX31_RS14505 ribonuclease PH 0.56 EX31_RS11355 chemotaxis protein CheY low > 89
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2741 ribonuclease PH 0.35 Ga0059261_1116 Response regulator receiver domain — —
Pectobacterium carotovorum WPP14 0.52 HER17_RS20855 ribonuclease PH 0.58 HER17_RS08125 chemotaxis response regulator CheY low > 75

Not shown: 8 genomes with orthologs for Rru_A3641 only; 2 genomes with orthologs for Rru_A2837 only