Homologs of QEN71_RS05360 from Paraburkholderia sabiae LMG 24235

helix-turn-helix transcriptional regulator
SEED: Regulatory protein of benzoate catabolism
KEGG: shikimate kinase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia sabiae LMG 24235 QEN71_RS05360 helix-turn-helix transcriptional regulator cofit 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00372 transcriptional regulator, XRE family with shikimate kinase activity sig. 93 93
o Burkholderia phytofirmans PsJN BPHYT_RS13350 shikimate kinase sig. 87 100
o Paraburkholderia graminis OAS925 ABIE53_002880 XRE family aerobic/anaerobic benzoate catabolism transcriptional regulator strong 86 96
o Variovorax sp. OAS795 ABID97_RS03110 helix-turn-helix transcriptional regulator strong 59 95
o Variovorax sp. SCN45 GFF3403 Benzoate catabolism regulator with shikimate kinase domain sig. 62 88
o Castellaniella sp019104865 MT123 ABCV34_RS00635 helix-turn-helix transcriptional regulator sig. 61 87
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1204 Regulatory protein of benzoate catabolism strong 62 89
o Cupriavidus basilensis FW507-4G11 RR42_RS35135 transcriptional regulator insig. 58 95
  Paraburkholderia graminis OAS925 ABIE53_005446 XRE family aerobic/anaerobic benzoate catabolism transcriptional regulator insig. 61 91
o Acidovorax sp. GW101-3H11 Ac3H11_3086 Regulatory protein of benzoate catabolism sig. 61 85
  Cupriavidus basilensis FW507-4G11 RR42_RS07515 transcriptional regulator sig. 54 89
o Rhodopseudomonas palustris CGA009 TX73_024880 helix-turn-helix transcriptional regulator sig. 43 88
o Magnetospirillum magneticum AMB-1 AMB_RS00855 helix-turn-helix domain-containing protein cofit 47 83
  Rhodospirillum rubrum S1H Rru_A3740 Shikimate kinase (NCBI) no data 31 53
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3592 shikimate kinase (EC 2.7.1.71) no data 35 48
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04170 shikimate kinase no data 34 50
  Mycobacterium tuberculosis H37Rv Rv2539c Shikimate kinase AroK (SK) no data 33 51
  Pseudomonas stutzeri RCH2 Psest_3714 Shikimate kinase no data 34 56
  Azospirillum sp. SherDot2 MPMX19_02640 Shikimate kinase no data 31 54
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15995 shikimate kinase no data 35 45
  Pseudomonas sp. S08-1 OH686_10020 Shikimate kinase I strong 35 52
  Bosea sp. OAE506 ABIE41_RS06090 shikimate kinase no data 31 46
  Pseudomonas fluorescens FW300-N2C3 AO356_09390 shikimate kinase no data 35 52
  Magnetospirillum magneticum AMB-1 AMB_RS19870 shikimate kinase no data 29 47
  Acidovorax sp. GW101-3H11 Ac3H11_3449 Shikimate kinase I (EC 2.7.1.71) strong 33 44
  Variovorax sp. OAS795 ABID97_RS23260 shikimate kinase no data 31 49
  Pseudomonas fluorescens FW300-N2E3 AO353_12500 shikimate kinase strong 34 52
  Dechlorosoma suillum PS Dsui_1094 shikimate kinase strong 31 52
  Agrobacterium fabrum C58 Atu3626 shikimate kinase no data 29 47
  Synechococcus elongatus PCC 7942 Synpcc7942_0894 aroK shikimate kinase no data 29 45
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3755 Shikimate kinase I (EC 2.7.1.71) no data 34 50
  Pseudomonas syringae pv. syringae B728a Psyr_0408 shikimate kinase no data 34 52
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0408 shikimate kinase no data 34 52
  Marinobacter adhaerens HP15 HP15_479 shikimate kinase I no data 30 53
  Rhizobium sp. OAE497 ABIE40_RS17675 shikimate kinase no data 26 50
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1538 Shikimate kinase I (EC 2.7.1.71) no data 34 50
  Pseudomonas fluorescens GW456-L13 PfGW456L13_276 Shikimate kinase I (EC 2.7.1.71) cofit 34 50
  Alteromonas macleodii MIT1002 MIT1002_00448 Shikimate kinase 1 no data 29 49
  Rhodopseudomonas palustris CGA009 TX73_002615 shikimate kinase no data 29 52
  Sinorhizobium meliloti 1021 SMc00695 shikimate kinase no data 29 46
  Bacteroides thetaiotaomicron VPI-5482 BT3393 shikimate kinase (NCBI ptt file) no data 31 48
  Caulobacter crescentus NA1000 CCNA_03103 shikimate kinase (EC 2.7.1.71) (from data) strong 31 49
  Caulobacter crescentus NA1000 Δfur CCNA_03103 shikimate kinase cofit 31 49
  Pseudomonas fluorescens SBW25 PFLU_RS02025 shikimate kinase AroK no data 33 52
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02025 shikimate kinase AroK no data 33 52
  Pseudomonas simiae WCS417 PS417_01980 shikimate kinase no data 33 52
  Kangiella aquimarina DSM 16071 B158DRAFT_0763 shikimate kinase (EC 2.7.1.71) no data 30 45
  Pseudomonas sp. RS175 PFR28_05012 Shikimate kinase 1 no data 34 50
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1616.1 Shikimate kinase I (EC 2.7.1.71) insig. 28 53
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12105 shikimate kinase strong 31 48
  Bacteroides ovatus ATCC 8483 BACOVA_01915 shikimate kinase cofit 31 48
  Castellaniella sp019104865 MT123 ABCV34_RS12700 shikimate kinase no data 31 54
  Phocaeicola dorei CL03T12C01 ABI39_RS04695 shikimate kinase strong 31 48
  Paraburkholderia sabiae LMG 24235 QEN71_RS28040 shikimate kinase strong 30 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS40060 shikimate kinase insig. 29 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1332 Shikimate kinase I (EC 2.7.1.71) strong 28 48
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS10475 shikimate kinase strong 27 46
  Vibrio cholerae E7946 ATCC 55056 CSW01_13305 shikimate kinase sig. 31 51
  Shewanella loihica PV-4 Shew_0213 shikimate kinase I (RefSeq) no data 29 53
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07205 shikimate kinase strong 27 53
  Bacteroides stercoris CC31F HMPREF1181_RS02530 shikimate kinase strong 30 53
  Shewanella sp. ANA-3 Shewana3_3894 aroK shikimate kinase I (RefSeq) no data 31 49
  Fusobacterium nucleatum SB010 HUW76_07055 shikimate kinase cofit 31 49
  Pseudomonas putida KT2440 PP_5079 Shikimate kinase no data 32 52
  Shewanella oneidensis MR-1 SO0286 aroK shikimate kinase (NCBI ptt file) no data 28 53
  Escherichia coli BL21 ECD_03242 shikimate kinase I strong 32 35
  Escherichia fergusonii Becca EFB2_00438 Shikimate kinase 1 strong 32 35
  Escherichia coli ECOR27 NOLOHH_08900 aroK shikimate kinase AroK no data 32 35
  Escherichia coli ECOR38 HEPCGN_15930 aroK shikimate kinase AroK no data 32 35
  Escherichia coli ECRC62 BNILDI_02620 aroK shikimate kinase AroK no data 32 35
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00313 Shikimate kinase 1 no data 32 35
  Escherichia coli Nissle 1917 ECOLIN_RS19365 shikimate kinase AroK no data 32 35
  Escherichia coli BW25113 b3390 aroK shikimate kinase I (NCBI) strong 32 35
  Rahnella sp. WP5 EX31_RS04725 shikimate kinase AroK strong 32 35
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25310 shikimate kinase no data 30 47
  Escherichia coli ECRC101 OKFHMN_17110 aroK shikimate kinase AroK insig. 28 42
  Escherichia coli ECRC101 MCAODC_07640 aroK shikimate kinase AroK sig. 28 42
  Escherichia coli ECRC102 NIAGMN_14880 aroK shikimate kinase AroK insig. 28 42
  Escherichia coli ECRC98 JDDGAC_20740 aroK shikimate kinase AroK no data 28 42
  Escherichia coli ECRC99 KEDOAH_11030 aroK shikimate kinase AroK no data 28 42
  Serratia liquefaciens MT49 IAI46_23705 shikimate kinase AroK no data 32 35
  Erwinia tracheiphila SCR3 LU632_RS22870 aroK shikimate kinase AroK no data 32 35
  Pectobacterium carotovorum WPP14 HER17_RS01775 shikimate kinase AroK no data 32 35
  Erwinia tracheiphila SCR3 LU632_RS18975 aroL shikimate kinase AroL insig. 31 43
  Enterobacter asburiae PDN3 EX28DRAFT_4152 shikimate kinase (EC 2.7.1.71) insig. 32 35
  Enterobacter sp. TBS_079 MPMX20_04279 Shikimate kinase 1 strong 32 35
  Pantoea sp. MT58 IAI47_01890 shikimate kinase AroK no data 28 52
  Klebsiella michiganensis M5al BWI76_RS26090 shikimate kinase no data 32 35
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19855 shikimate kinase no data 29 45
  Pantoea sp. MT58 IAI47_14930 shikimate kinase AroL insig. 30 45
  Shewanella amazonensis SB2B Sama_3368 aroK shikimate kinase I (RefSeq) no data 29 49
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0140 Shikimate kinase no data 27 46
  Pectobacterium carotovorum WPP14 HER17_RS16095 shikimate kinase AroL insig. 27 47
  Phaeobacter inhibens DSM 17395 PGA1_c14090 shikimate kinase AroK no data 27 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05614 shikimate kinase no data 28 46
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF629 Shikimate kinase I (EC 2.7.1.71) insig. 31 32
  Cupriavidus basilensis FW507-4G11 RR42_RS19010 shikimate kinase strong 28 49
  Dickeya dadantii 3937 DDA3937_RS05390 shikimate kinase AroL insig. 26 47
  Burkholderia phytofirmans PsJN BPHYT_RS17890 shikimate kinase cofit 27 46