Homologs of Pf6N2E2_3500 from Pseudomonas fluorescens FW300-N2E2

DNA-damage-inducible protein F
SEED: DNA-damage-inducible protein F
KEGG: multidrug resistance protein, MATE family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3500 DNA-damage-inducible protein F insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_08140 MATE family efflux transporter insig. 97 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1292 DNA-damage-inducible protein F insig. 88 99
o Pseudomonas sp. RS175 PFR28_05231 DNA damage-inducible protein F insig. 93 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_40 DNA-damage-inducible protein F insig. 87 100
o Pseudomonas sp. DMC3 GFF3325 DNA damage-inducible protein F cofit 87 100
o Pseudomonas fluorescens FW300-N2E3 AO353_13735 MATE family efflux transporter insig. 87 99
o Pseudomonas simiae WCS417 PS417_03010 XRE family transcriptional regulator insig. 86 100
o Pseudomonas orientalis W4I3 QF045_RS06045 MATE family efflux transporter cofit 87 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00834 DNA damage-inducible protein F cofit 86 100
o Pseudomonas fluorescens SBW25 PFLU_RS03090 MATE family efflux transporter insig. 86 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS03090 MATE family efflux transporter insig. 86 99
o Pseudomonas putida KT2440 PP_0569 MATE efflux family protein insig. 80 99
o Pseudomonas syringae pv. syringae B728a Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 78 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4384 Multi antimicrobial extrusion protein MatE insig. 78 99
o Pseudomonas sp. SVBP6 COO64_RS18420 MATE family efflux transporter insig. 81 98
o Pseudomonas sp. BP01 JOY50_RS23180 MATE family efflux transporter insig. 79 99
o Pseudomonas stutzeri RCH2 Psest_3364 putative efflux protein, MATE family insig. 76 99
o Pseudomonas aeruginosa PA14 IKLFDK_29470 DNA-damage-inducible protein F sig. 73 100
o Pseudomonas segetis P6 ACVTMO_RS20250 MATE family efflux transporter insig. 74 94
o Pseudomonas aeruginosa MRSN321 DY961_RS09875 MATE family efflux transporter sig. 73 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS52175 MATE family efflux transporter insig. 73 100
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00490 MATE family efflux transporter insig. 63 99
o Pseudomonas sp. S08-1 OH686_07530 MATE efflux family protein insig. 72 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_00480 MATE family efflux transporter insig. 48 93
o Marinobacter adhaerens HP15 HP15_3770 MATE efflux family protein insig. 45 96
o Shewanella amazonensis SB2B Sama_3501 DNA-damage-inducible protein F (RefSeq) sig. 46 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0674 putative efflux protein, MATE family insig. 45 95
o Rahnella sp. WP5 EX31_RS11850 MATE family efflux transporter DinF insig. 44 97
o Serratia liquefaciens MT49 IAI46_23000 MATE family efflux transporter DinF insig. 44 98
o Enterobacter sp. TBS_079 MPMX20_00260 DNA damage-inducible protein F insig. 44 99
o Shewanella oneidensis MR-1 SO4617 dinF DNA-damage-inducible protein F (NCBI ptt file) sig. 44 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1413 DNA-damage-inducible protein F insig. 44 97
o Escherichia fergusonii Becca EFB2_04559 DNA damage-inducible protein F insig. 46 97
o Escherichia coli Nissle 1917 ECOLIN_RS23340 MATE family efflux transporter DinF insig. 46 97
o Escherichia coli ECRC62 BNILDI_06305 dinF MATE family efflux transporter DinF insig. 46 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03999 DNA damage-inducible protein F insig. 46 97
o Escherichia coli BL21 ECD_03916 oxidative stress resistance protein; putative MATE family efflux pump; UV and mitomycin C inducible protein insig. 45 97
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21210 MATE family efflux transporter DinF cofit 43 97
o Escherichia coli ECOR27 NOLOHH_05215 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli ECOR38 HEPCGN_11580 dinF MATE family efflux transporter DinF insig. 45 97
o Dinoroseobacter shibae DFL-12 Dshi_0845 MATE efflux family protein (RefSeq) strong 42 94
o Enterobacter asburiae PDN3 EX28DRAFT_4268 putative efflux protein, MATE family insig. 44 96
o Escherichia coli BW25113 b4044 dinF DNA-damage-inducible SOS response protein (NCBI) insig. 45 97
o Klebsiella pneumoniae MKP103 KDGMDA_10335 MATE family efflux transporter DinF insig. 45 96
o Escherichia coli ECRC100 OKFHMN_13060 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli ECRC101 MCAODC_03560 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli ECRC102 NIAGMN_10810 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli ECRC98 JDDGAC_16685 dinF MATE family efflux transporter DinF insig. 45 97
o Escherichia coli ECRC99 KEDOAH_15100 dinF MATE family efflux transporter DinF no data 45 97
o Pantoea sp. MT58 IAI47_17885 MATE family efflux transporter DinF insig. 42 97
o Shewanella loihica PV-4 Shew_0107 MATE efflux family protein (RefSeq) sig. 44 94
o Paraburkholderia sabiae LMG 24235 QEN71_RS04895 MATE family efflux transporter insig. 42 95
o Phaeobacter inhibens DSM 17395 PGA1_c12130 DNA-damage-inducible protein F sig. 40 96
o Cupriavidus basilensis FW507-4G11 RR42_RS09395 multidrug transporter MatE insig. 45 93
o Klebsiella michiganensis M5al BWI76_RS01880 MATE family efflux transporter insig. 45 95
o Erwinia amylovora T8 OLJFJH_03575 MATE family efflux transporter DinF insig. 45 93
o Shewanella sp. ANA-3 Shewana3_4001 MATE efflux family protein (RefSeq) sig. 44 93
o Ralstonia sp. UNC404CL21Col ABZR87_RS22695 MATE family efflux transporter insig. 41 92
o Xanthobacter sp. DMC5 GFF148 DNA damage-inducible protein F insig. 40 92
o Alteromonas macleodii MIT1002 MIT1002_04023 DNA-damage-inducible protein F insig. 40 96
o Bacteroides thetaiotaomicron VPI-5482 BT2241 DNA-damage-inducible protein F (NCBI ptt file) sig. 36 92
o Bacteroides ovatus ATCC 8483 BACOVA_03104 MATE efflux family protein insig. 35 94
o Burkholderia phytofirmans PsJN BPHYT_RS14080 multidrug transporter MatE insig. 44 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13880 MATE family efflux transporter sig. 35 93
  Paraburkholderia graminis OAS925 ABIE53_002980 MATE family multidrug resistance protein insig. 43 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04426 multidrug resistance protein, MATE family insig. 44 95
o Phocaeicola dorei CL03T12C01 ABI39_RS09485 MATE family efflux transporter insig. 35 93
o Ralstonia solanacearum PSI07 RPSI07_RS01180 MATE family efflux transporter insig. 42 93
o Ralstonia solanacearum GMI1000 RS_RS18520 MATE family efflux transporter insig. 42 93
o Bacteroides stercoris CC31F HMPREF1181_RS09420 MATE family efflux transporter insig. 34 92
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS15090 MATE family efflux transporter insig. 35 95
o Rhodopseudomonas palustris CGA009 TX73_004125 MATE family efflux transporter insig. 41 92
o Sinorhizobium meliloti 1021 SMc02244 transmembrane protein insig. 39 90
o Rhizobium sp. OAE497 ABIE40_RS02425 MATE family efflux transporter insig. 37 93
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1394 putative efflux protein, MATE family insig. 37 95
o Agrobacterium fabrum C58 Atu5428 DNA-damage-inducible protein F insig. 35 93
o Synechocystis sp000284455 PCC 6803 SGL_RS06455 guanitoxin biosynthesis MATE family efflux transporter GntT strong 28 91
o Cellulophaga baltica 18 M666_RS04275 MATE family efflux transporter insig. 26 96
  Bifidobacterium breve UCC2003 BBR_RS11530 MATE family efflux transporter insig. 27 98
  Phocaeicola dorei CL03T12C01 ABI39_RS03360 MATE family efflux transporter insig. 29 44
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07410 MATE family efflux transporter insig. 29 45
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09055 MATE family efflux transporter insig. 29 44
  Cupriavidus basilensis FW507-4G11 RR42_RS13335 multidrug transporter MatE insig. 30 67
  Bacteroides ovatus ATCC 8483 BACOVA_03694 MATE efflux family protein insig. 20 78
  Bacteroides thetaiotaomicron VPI-5482 BT0588 BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) strong 21 77
  Bacteroides thetaiotaomicron VPI-5482 BT1900 BexA, putative cation effux pump (NCBI ptt file) strong 26 45
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS16405 MATE family efflux transporter strong 22 90
  Bacteroides stercoris CC31F HMPREF1181_RS16215 MATE family efflux transporter insig. 23 70
  Bacteroides stercoris CC31F HMPREF1181_RS15150 MATE family efflux transporter strong 21 78
  Fusobacterium nucleatum SB010 HUW76_07965 MATE family efflux transporter insig. 19 63
  Pseudomonas sp. DMC3 GFF1263 Multidrug resistance protein NorM cofit 26 95
  Bacteroides ovatus ATCC 8483 BACOVA_04342 MATE efflux family protein sig. 21 66
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS12525 MATE family efflux transporter cofit 27 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS14690 MATE family efflux transporter insig. 21 67
  Phocaeicola dorei CL03T12C01 ABI39_RS10860 MATE family efflux transporter insig. 23 66
  Rhodanobacter denitrificans MT42 LRK55_RS10790 MATE family efflux transporter insig. 26 99
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11085 MATE family efflux transporter insig. 26 99
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05175 MATE family efflux transporter insig. 26 71
  Pseudomonas segetis P6 ACVTMO_RS07135 MATE family efflux transporter insig. 26 66