| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas putida KT2440 | PP_5241 | | DNA-binding response regulator, LuxR family | sig. | 100 | 100 |
| o | Pseudomonas sp. DMC3 | GFF2809 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | insig. | 54 | 98 |
| | Xanthobacter sp. DMC5 | GFF4035 | | Response regulator protein TmoT | no data | 46 | 61 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22535 | | LuxR family transcriptional regulator | insig. | 49 | 57 |
| | Agrobacterium fabrum C58 | Atu4774 | | two component response regulator | insig. | 46 | 60 |
| | Rhodopseudomonas palustris CGA009 | TX73_010870 | | response regulator | insig. | 43 | 60 |
| | Pseudomonas sp. S08-1 | OH686_18645 | | Two-component transcriptional response regulator, LuxR family | insig. | 44 | 59 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS25965 | | LuxR family transcriptional regulator | insig. | 46 | 63 |
| | Pseudomonas sp. RS175 | PFR28_02131 | | Response regulator protein TmoT | insig. | 46 | 59 |
| | Rhodopseudomonas palustris CGA009 | TX73_006750 | | response regulator | insig. | 43 | 60 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4408 | | two-component response regulator | insig. | 44 | 60 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS20545 | | response regulator transcription factor | cofit | 44 | 58 |
| | Lysobacter sp. OAE881 | ABIE51_RS11970 | | response regulator transcription factor | insig. | 41 | 66 |
| | Pantoea sp. MT58 | IAI47_20275 | | response regulator transcription factor | insig. | 43 | 58 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25435 | | nodulation protein NolW | insig. | 46 | 60 |
| | Pseudomonas sp. RS175 | PFR28_02521 | | Response regulator protein TmoT | no data | 43 | 59 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31420 | | LuxR family transcriptional regulator | insig. | 43 | 59 |
| | Pseudomonas sp. DMC3 | GFF1098 | | Response regulator protein TodT | no data | 47 | 59 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17625 | | Nodulation protein W | no data | 44 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_002569 | | FixJ family two-component response regulator | insig. | 45 | 56 |
| | Azospirillum sp. SherDot2 | MPMX19_03583 | | Response regulator protein TodT | no data | 44 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05022 | | two component transcriptional regulator, LuxR family | insig. | 44 | 62 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22615 | | nodulation protein NolW | no data | 42 | 59 |
| | Pseudomonas segetis P6 | ACVTMO_RS02215 | | response regulator transcription factor | insig. | 42 | 61 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39350 | | response regulator transcription factor | no data | 41 | 63 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37545 | | response regulator | insig. | 39 | 62 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | strong | 41 | 62 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | insig. | 41 | 62 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03395 | | two component transcriptional regulator, LuxR family | insig. | 41 | 60 |
| | Dickeya dadantii 3937 | DDA3937_RS07235 | | response regulator transcription factor | insig. | 42 | 59 |
| | Paraburkholderia graminis OAS925 | ABIE53_001505 | | FixJ family two-component response regulator | insig. | 40 | 63 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS03440 | | response regulator | insig. | 46 | 57 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3507 | | Response regulator | insig. | 42 | 52 |
| | Rhizobium sp. OAE497 | ABIE40_RS12250 | | response regulator | insig. | 43 | 57 |
| | Sinorhizobium meliloti 1021 | SMa1686 | | Two-component response regulator | insig. | 42 | 59 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34645 | | LuxR family transcriptional regulator | no data | 40 | 57 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4095 | | Nitrogen regulation protein NR(I) | strong | 39 | 57 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08340 | | chemotaxis protein CheY | insig. | 41 | 59 |
| | Azospirillum sp. SherDot2 | MPMX19_02868 | | Response regulator protein TmoT | insig. | 39 | 59 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4893 | | Nitrogen regulation protein NR(I) | cofit | 40 | 57 |
| | Azospirillum brasilense Sp245 | AZOBR_RS09615 | | LuxR family transcriptional regulator | no data | 39 | 56 |
| | Agrobacterium fabrum C58 | Atu4300 | | two component response regulator | insig. | 44 | 54 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01776 | | two component transcriptional regulator, LuxR family | insig. | 40 | 59 |
| | Rhizobium sp. OAE497 | ABIE40_RS15185 | | response regulator | insig. | 39 | 59 |
| | Pseudomonas simiae WCS417 | PS417_10320 | | hypothetical protein | insig. | 41 | 56 |
| | Variovorax sp. OAS795 | ABID97_RS14090 | | response regulator transcription factor | strong | 37 | 57 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1205 | | Two-component response regulator | strong | 40 | 62 |
| | Variovorax sp. SCN45 | GFF965 | | Two-component transcriptional response regulator, LuxR family | no data | 37 | 57 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS07355 | | LuxR family transcriptional regulator | no data | 36 | 57 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS21035 | | response regulator | insig. | 42 | 59 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30660 | | response regulator transcription factor | no data | 38 | 59 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12850 | | LuxR family transcriptional regulator | no data | 38 | 57 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00464 | | two component transcriptional regulator, LuxR family | no data | 38 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_002795 | | FixJ family two-component response regulator | no data | 38 | 57 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05715 | | oxygen response regulator transcription factor FixJ | no data | 38 | 57 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS04170 | | response regulator transcription factor | no data | 37 | 59 |
| | Variovorax sp. OAS795 | ABID97_RS01990 | | response regulator | no data | 41 | 57 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06700 | | LuxR family transcriptional regulator | insig. | 36 | 56 |
| | Sinorhizobium meliloti 1021 | SMa0940 | | Response regulator | insig. | 40 | 59 |
| | Ralstonia solanacearum GMI1000 | RS_RS08045 | | DNA-binding response regulator | strong | 38 | 58 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15805 | | DNA-binding response regulator | no data | 38 | 58 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS13480 | | response regulator transcription factor | no data | 38 | 58 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01680 | | DNA-binding response regulator | no data | 38 | 58 |
| | Ralstonia solanacearum UW163 | UW163_RS14990 | | DNA-binding response regulator | no data | 38 | 58 |
| | Azospirillum sp. SherDot2 | MPMX19_00657 | | Response regulator protein TmoT | no data | 37 | 56 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04570 | | DNA-binding response regulator | no data | 37 | 57 |
| | Sinorhizobium meliloti 1021 | SM_b20869 | | two-component response regulator protein | insig. | 44 | 54 |
| | Variovorax sp. OAS795 | ABID97_RS26300 | | response regulator | no data | 42 | 59 |
| | Variovorax sp. SCN45 | GFF5447 | | Two-component transcriptional response regulator, LuxR family | no data | 41 | 57 |
| | Pseudomonas segetis P6 | ACVTMO_RS10065 | | response regulator transcription factor | insig. | 37 | 56 |
| | Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 36 | 57 |
| | Caulobacter crescentus NA1000 | CCNA_00795 | | two-component response regulator FixJ | strong | 38 | 58 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00795 | | two-component response regulator FixJ | cofit | 38 | 58 |
| | Shewanella loihica PV-4 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 34 | 62 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11910 | | chemotaxis protein CheY | no data | 39 | 57 |
| | Xanthobacter sp. DMC5 | GFF3781 | | Transcriptional regulatory protein FixJ | insig. | 36 | 58 |
| | Pseudomonas sp. BP01 | JOY50_RS28135 | | response regulator transcription factor | insig. | 36 | 62 |
| | Pseudomonas putida KT2440 | PP_3551 | | DNA-binding response regulator, LuxR family | strong | 38 | 60 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0931 | | Response regulator | insig. | 35 | 54 |
| | Marinobacter adhaerens HP15 | HP15_1053 | | two component transcriptional regulator, LuxR family | sig. | 33 | 58 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23775 | | LuxR family transcriptional regulator | no data | 42 | 57 |
| | Sinorhizobium meliloti 1021 | SMa1227 | | response regulator FixJ | cofit | 35 | 58 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10740 | | LuxR family transcriptional regulator | insig. | 34 | 62 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | insig. | 36 | 56 |
| | Shewanella sp. ANA-3 | Shewana3_0637 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 36 | 57 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24030 | | chemotaxis protein CheY | no data | 36 | 58 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2537 | | Two-component response regulator | strong | 35 | 57 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS24605 | | DNA-binding response regulator | no data | 40 | 62 |
| | Dechlorosoma suillum PS | Dsui_3160 | | response regulator | strong | 35 | 57 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS07490 | | response regulator | no data | 35 | 57 |
| | Rhodopseudomonas palustris CGA009 | TX73_022010 | | response regulator FixJ | no data | 34 | 58 |
| | Sphingobium sp. HT1-2 | GFF5226 | | Two-component nitrogen fixation transcriptional regulator FixJ | insig. | 36 | 56 |
| | Rhizobium sp. OAE497 | ABIE40_RS15215 | | response regulator | insig. | 36 | 57 |
| | Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 35 | 59 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1673 | | Nitrogen regulation protein NR(I) | insig. | 35 | 57 |
| | Paraburkholderia graminis OAS925 | ABIE53_005785 | | FixJ family two-component response regulator | no data | 43 | 57 |
| | Lysobacter sp. OAE881 | ABIE51_RS09725 | | response regulator | no data | 39 | 57 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS33050 | | LuxR family transcriptional regulator | insig. | 36 | 70 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01093 | | transcriptional regulator, winged helix family | insig. | 45 | 47 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35950 | | chemotaxis protein CheY | no data | 36 | 57 |
| | Dechlorosoma suillum PS | Dsui_2511 | | response regulator | insig. | 38 | 61 |
| | Sphingobium sp. HT1-2 | GFF3048 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 36 | 57 |
| | Variovorax sp. OAS795 | ABID97_RS16350 | | response regulator | no data | 33 | 60 |
| | Azospirillum sp. SherDot2 | MPMX19_03016 | | Response regulator protein TmoT | no data | 34 | 60 |
| | Variovorax sp. SCN45 | GFF192 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | no data | 33 | 58 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04230 | | LuxR family transcriptional regulator | strong | 34 | 56 |
| | Paraburkholderia graminis OAS925 | ABIE53_002241 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 58 | 29 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1126 | | Response regulator | insig. | 36 | 56 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01880 | | two component transcriptional regulator, LuxR family | insig. | 42 | 57 |
| | Rhodopseudomonas palustris CGA009 | TX73_008645 | | response regulator | cofit | 36 | 57 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4674 | | Nitrogen regulation protein NR(I) | no data | 32 | 57 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30355 | | transcriptional regulator | insig. | 57 | 30 |
| | Xanthobacter sp. DMC5 | GFF670 | | Response regulator protein TmoT | no data | 37 | 59 |
| | Pseudomonas protegens RBAN4 | FABNJH_11275 | | Nodulation protein W | insig. | 34 | 58 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_4074 | | two component transcriptional regulator, LuxR family | insig. | 34 | 56 |
| | Sphingobium sp. HT1-2 | GFF1112 | | Two-component transcriptional response regulator, LuxR family | cofit | 38 | 43 |
| | Shewanella oneidensis MR-1 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | insig. | 32 | 57 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS13990 | | response regulator | insig. | 37 | 58 |
| | Pseudomonas sp. SVBP6 | COO64_RS17310 | | response regulator transcription factor | insig. | 35 | 58 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15535 | | response regulator | no data | 32 | 57 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_21605 | | two-component system response regulator BfiR | sig. | 33 | 58 |
| | Dechlorosoma suillum PS | Dsui_2080 | | response regulator | cofit | 37 | 57 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37405 | | winged helix-turn-helix domain-containing protein | insig. | 60 | 28 |
| | Shewanella sp. ANA-3 | Shewana3_3697 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 32 | 58 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2568 | | two component transcriptional regulator, LuxR family (RefSeq) | cofit | 34 | 57 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS28470 | bfiR;inference=COORDINATES | two-component system response regulator BfiR | insig. | 33 | 58 |
| | Sphingobium sp. HT1-2 | GFF5392 | | Two-component nitrogen fixation transcriptional regulator FixJ | cofit | 32 | 58 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS49310 | bfiR;inference=COORDINATES | two-component system response regulator BfiR | sig. | 33 | 58 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1724 | | DNA-binding response regulator, LuxR family | no data | 33 | 58 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS04575 | | DNA-binding response regulator | insig. | 32 | 58 |
| | Rhizobium sp. OAE497 | ABIE40_RS23715 | | response regulator | insig. | 34 | 58 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03403 | | Predicted ATPase | insig. | 52 | 31 |
| | Shewanella amazonensis SB2B | Sama_3183 | | response regulator receiver protein (RefSeq) | insig. | 36 | 57 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3828 | | two component transcriptional regulator, LuxR family | insig. | 35 | 54 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13745 | | response regulator | no data | 33 | 57 |
| | Azospirillum brasilense Sp245 | AZOBR_RS22615 | | chemotaxis protein CheY | no data | 34 | 57 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30420 | | transcriptional regulator | insig. | 57 | 28 |
| | Paraburkholderia graminis OAS925 | ABIE53_002254 | | putative ATPase/DNA-binding winged helix-turn-helix (wHTH) protein | insig. | 53 | 28 |
| | Shewanella loihica PV-4 | Shew_0609 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 33 | 58 |
| | Enterobacter sp. TBS_079 | MPMX20_01965 | | Response regulator protein TmoT | insig. | 31 | 56 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01106 | | Predicted ATPase | no data | 53 | 28 |
| | Rhodospirillum rubrum S1H | Rru_A1500 | | Signal Transduction Histidine Kinase (STHK) with CheB and CheR activity (NCBI) | insig. | 33 | 56 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS34725 | | transcriptional regulator | insig. | 32 | 58 |
| | Dechlorosoma suillum PS | Dsui_3386 | | response regulator | no data | 34 | 58 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3576 | | Tetrathionate reductase two-component response regulator | insig. | 35 | 56 |
| | Serratia liquefaciens MT49 | IAI46_06840 | | response regulator transcription factor | insig. | 31 | 58 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37415 | | winged helix-turn-helix domain-containing protein | insig. | 49 | 28 |
| | Lysobacter sp. OAE881 | ABIE51_RS03450 | | response regulator | insig. | 33 | 57 |
| | Agrobacterium fabrum C58 | Atu1116 | | two component response regulator | insig. | 32 | 58 |
| | Marinobacter adhaerens HP15 | HP15_1037 | | two-component response regulator | sig. | 30 | 56 |
| | Shewanella amazonensis SB2B | Sama_2399 | | response regulator receiver protein (RefSeq) | insig. | 31 | 58 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37450 | | winged helix-turn-helix domain-containing protein | insig. | 54 | 28 |
| | Xanthobacter sp. DMC5 | GFF483 | | Sensor histidine kinase RcsC | insig. | 34 | 57 |
| | Sphingobium sp. HT1-2 | GFF5009 | | Two-component transcriptional response regulator, LuxR family | cofit | 37 | 43 |
| | Klebsiella michiganensis M5al | BWI76_RS14640 | | DNA-binding response regulator | no data | 33 | 57 |
| | Shewanella loihica PV-4 | Shew_1969 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 34 | 43 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3789 | | two component transcriptional regulator, LuxR family | insig. | 31 | 59 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS09930 | | response regulator | insig. | 34 | 55 |
| | Variovorax sp. SCN45 | GFF1896 | | Two-component transcriptional response regulator, LuxR family | insig. | 35 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30635 | | winged helix-turn-helix domain-containing protein | insig. | 51 | 26 |
| | Serratia liquefaciens MT49 | IAI46_04860 | | response regulator transcription factor | sig. | 32 | 58 |
| | Agrobacterium fabrum C58 | Atu4805 | | two component sensor kinase/response regulator hybrid | insig. | 28 | 61 |
| | Pseudomonas protegens RBAN4 | FABNJH_24290 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 41 | 34 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37555 | | response regulator | strong | 37 | 37 |
| | Shewanella oneidensis MR-1 | SO1416 | | DNA-binding response regulator (NCBI ptt file) | insig. | 30 | 49 |
| | Sphingobium sp. HT1-2 | GFF2850 | | response regulator receiver protein | cofit | 30 | 61 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_30010 | | transcriptional regulator | insig. | 32 | 58 |
| | Sinorhizobium meliloti 1021 | SM_b20078 | | response regulator | insig. | 34 | 44 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_25420 | | chemotaxis protein CheY | insig. | 38 | 35 |
| | Pseudomonas simiae WCS417 | PS417_22645 | | C4-dicarboxylate ABC transporter | sig. | 34 | 45 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04682 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 40 | 34 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 40 | 34 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 35 | 45 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS24280 | | sigma-54-dependent Fis family transcriptional regulator | strong | 35 | 45 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS04010 | | sigma-54 dependent transcriptional regulator | insig. | 38 | 39 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS06435 | | response regulator | insig. | 31 | 56 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11480 | | response regulator | insig. | 34 | 44 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11480 | | response regulator | sig. | 34 | 44 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 36 | 40 |
| | Azospirillum brasilense Sp245 | AZOBR_RS13405 | | putative transcriptional regulatory protein HTH DNA binding domain | insig. | 35 | 35 |
| | Shewanella loihica PV-4 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | strong | 31 | 46 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02633 | | hypothetical protein | cofit | 43 | 29 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03404 | | Response regulator | no data | 40 | 35 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 35 | 40 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 42 | 29 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18085 | | helix-turn-helix transcriptional regulator | insig. | 42 | 29 |
| | Pseudomonas sp. RS175 | PFR28_02650 | | hypothetical protein | insig. | 43 | 29 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS35945 | | response regulator receiver | insig. | 41 | 31 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3869 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 40 | 29 |
| | Pectobacterium carotovorum WPP14 | HER17_RS14245 | | response regulator transcription factor | insig. | 31 | 60 |
| | Pseudomonas orientalis W4I3 | QF045_RS13865 | | winged helix-turn-helix domain-containing protein | insig. | 42 | 29 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5919 | | Signal transduction response regulator / Tetratricopeptide repeat-containing protein | insig. | 35 | 32 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16305 | | sigma-54 dependent transcriptional regulator | insig. | 31 | 45 |
| | Pseudomonas sp. DMC3 | GFF5041 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 38 | 32 |
| | Pseudomonas orientalis W4I3 | QF045_RS13860 | | winged helix-turn-helix domain-containing protein | insig. | 41 | 28 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_252 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 36 | 38 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 36 | 40 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1806 | | Nitrogen regulation protein NR(I) | strong | 35 | 40 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 34 | 40 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22240 | | transcriptional regulator | insig. | 41 | 27 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_13865 | | nitrogen regulation protein NR(I) | insig. | 37 | 37 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 35 | 40 |
| | Pseudomonas simiae WCS417 | PS417_16115 | | transcriptional regulator | insig. | 41 | 29 |
| | Xanthobacter sp. DMC5 | GFF4036 | | Response regulator protein TodT | no data | 36 | 34 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4215 | | Adenylate cyclase (EC 4.6.1.1) | insig. | 33 | 38 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 35 | 40 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 35 | 40 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_28480 | | CadC-family transcriptional regulator | insig. | 40 | 28 |
| | Rahnella sp. WP5 | EX31_RS02520 | | sigma-54-dependent Fis family transcriptional regulator | strong | 36 | 34 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1060 | | Adenylate cyclase (EC 4.6.1.1) | insig. | 52 | 23 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_251 | | transcriptional regulator | insig. | 46 | 27 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 35 | 40 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 35 | 40 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02632 | | hypothetical protein | insig. | 40 | 28 |
| | Pseudomonas segetis P6 | ACVTMO_RS09225 | | ATP-binding protein | insig. | 37 | 28 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03805 | | C4-dicarboxylate ABC transporter | strong | 35 | 40 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_22245 | | transcriptional regulator | insig. | 42 | 30 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21950 | | transcriptional regulator | insig. | 39 | 35 |
| | Pseudomonas putida KT2440 | PP_5240 | | Response regulator | sig. | 37 | 35 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31455 | | transcriptional regulator | insig. | 36 | 35 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS09215 | | response regulator | insig. | 42 | 31 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS13730 | | response regulator transcription factor | cofit | 33 | 57 |
| | Pseudomonas protegens RBAN4 | FABNJH_28400 | citB | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains | insig. | 32 | 59 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23035 | | response regulator transcription factor | strong | 31 | 59 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22405 | | DNA-binding response regulator | strong | 31 | 59 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36315 | | response regulator transcription factor | strong | 31 | 59 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS18090 | | AAA family ATPase | insig. | 39 | 30 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18090 | | AAA family ATPase | insig. | 39 | 30 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 33 | 32 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 31 | 42 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2715 | | Adenylate cyclase (EC 4.6.1.1) | insig. | 32 | 38 |
| | Pseudomonas simiae WCS417 | PS417_25765 | | transcriptional regulator | insig. | 31 | 59 |
| | Pantoea sp. MT58 | IAI47_04245 | | two-component system response regulator NarL | sig. | 31 | 57 |
| | Lysobacter sp. OAE881 | ABIE51_RS09720 | | response regulator | insig. | 38 | 32 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3868 | | Disease resistance protein / Tetratricopeptide repeat-containing protein | insig. | 41 | 30 |
| | Dechlorosoma suillum PS | Dsui_1051 | | nitrogen regulation protein NR(I) | strong | 39 | 34 |
| | Agrobacterium fabrum C58 | Atu4773 | | two component response regulator | strong | 36 | 35 |
| | Paraburkholderia graminis OAS925 | ABIE53_001503 | | FixJ family two-component response regulator | strong | 35 | 34 |
| | Shewanella oneidensis MR-1 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | strong | 34 | 35 |
| | Pseudomonas stutzeri RCH2 | Psest_3491 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 31 | 45 |
| | Pseudomonas sp. S08-1 | OH686_15085 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 30 | 59 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2537 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 30 | 61 |
| | Azospirillum sp. SherDot2 | MPMX19_03582 | | Response regulator protein TmoT | insig. | 40 | 38 |
| | Shewanella amazonensis SB2B | Sama_3427 | | response regulator receiver protein (RefSeq) | strong | 36 | 34 |
| | Pantoea sp. MT58 | IAI47_13615 | | response regulator transcription factor | insig. | 33 | 57 |
| | Pseudomonas sp. DMC3 | GFF28 | | Response regulator UvrY | insig. | 32 | 59 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07270 | | transcriptional regulator | insig. | 31 | 59 |
| | Pseudomonas simiae WCS417 | PS417_16120 | | transcriptional regulator | insig. | 38 | 28 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13516_RS05610 | narL | two-component system response regulator NarL | cofit | 35 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS02545 | | response regulator transcription factor | insig. | 31 | 57 |