Homologs of PP_4627 from Pseudomonas putida KT2440

transcriptional regulator, LysR family
SEED: LysR family regulatory protein CidR

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4627 transcriptional regulator, LysR family sig. 100 100
o Pseudomonas sp. BP01 JOY50_RS15585 LysR family transcriptional regulator insig. 95 99
o Pseudomonas sp. SVBP6 COO64_RS03600 LysR family transcriptional regulator insig. 83 99
o Pseudomonas simiae WCS417 PS417_23460 LysR family transcriptional regulator insig. 73 99
o Pseudomonas aeruginosa MRSN321 DY961_RS15760 LysR family transcriptional regulator insig. 71 99
o Pseudomonas aeruginosa PUPa3 DQ20_RS41320 LysR family transcriptional regulator insig. 71 99
o Pseudomonas aeruginosa PA14 IKLFDK_17625 LysR family transcriptional regulator sig. 70 99
  Pseudomonas simiae WCS417 PS417_19125 LysR family transcriptional regulator sig. 47 99
o Xanthobacter sp. DMC5 GFF698 HTH-type transcriptional regulator CynR no data 48 100
o Pseudomonas fluorescens SBW25 PFLU_RS21120 LysR family transcriptional regulator insig. 46 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21120 LysR family transcriptional regulator strong 46 99
o Pseudomonas orientalis W4I3 QF045_RS21080 LysR family transcriptional regulator cofit 46 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04052 HTH-type transcriptional regulator CynR cofit 45 99
o Pseudomonas syringae pv. syringae B728a Psyr_0909 transcriptional regulator, LysR family insig. 45 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0909 transcriptional regulator, LysR family insig. 45 99
o Sphingobium sp. HT1-2 GFF3394 Transcriptional regulator CidR, LysR family insig. 41 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS28745 LysR family transcriptional regulator cofit 42 99
o Paraburkholderia graminis OAS925 ABIE53_000065 DNA-binding transcriptional LysR family regulator insig. 43 99
o Burkholderia phytofirmans PsJN BPHYT_RS18725 LysR family transcriptional regulator insig. 43 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05796 transcriptional regulator, LysR family insig. 43 99
o Erwinia amylovora T8 OLJFJH_03365 LysR family transcriptional regulator insig. 40 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21070 LysR family transcriptional regulator insig. 39 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU2111 transcriptional regulator, LysR family (TIGR) insig. 41 99
o Pantoea sp. MT58 IAI47_17745 LysR family transcriptional regulator insig. 39 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_10505 LysR family transcriptional regulator insig. 36 99
o Klebsiella pneumoniae MKP103 KDGMDA_10515 LysR family transcriptional regulator insig. 38 98
o Pseudomonas fluorescens FW300-N2E3 AO353_15120 hypothetical protein insig. 39 98
o Shewanella oneidensis MR-1 SO1046 transcriptional regulator, LysR family (NCBI ptt file) insig. 40 99
o Cupriavidus basilensis FW507-4G11 RR42_RS27560 transcriptional regulator insig. 40 100
o Serratia liquefaciens MT49 IAI46_22830 LysR family transcriptional regulator insig. 38 99
o Shewanella sp. ANA-3 Shewana3_0884 LysR family transcriptional regulator (RefSeq) cofit 39 99
o Escherichia fergusonii Becca EFB2_04525 Hydrogen peroxide-inducible genes activator insig. 39 98
o Escherichia coli Nissle 1917 ECOLIN_RS23525 LysR family transcriptional regulator insig. 39 98
o Enterobacter sp. TBS_079 MPMX20_00286 Hydrogen peroxide-inducible genes activator insig. 38 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1447 LysR family regulatory protein CidR insig. 38 98
o Enterobacter asburiae PDN3 EX28DRAFT_4237 Transcriptional regulator insig. 38 97
o Shewanella amazonensis SB2B Sama_2928 LysR family transcriptional regulator (RefSeq) strong 40 99
o Rahnella sp. WP5 EX31_RS12125 LysR family transcriptional regulator insig. 37 99
o Shewanella loihica PV-4 Shew_0828 LysR family transcriptional regulator (RefSeq) insig. 37 99
o Klebsiella michiganensis M5al BWI76_RS02045 LysR family transcriptional regulator sig. 37 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS12175 LysR family transcriptional regulator insig. 37 100
  Cupriavidus basilensis FW507-4G11 RR42_RS33910 LysR family transcriptional regulator insig. 36 100
o Acinetobacter radioresistens SK82 MPMX26_01607 HTH-type transcriptional regulator GltC no data 31 99
o Herbaspirillum seropedicae SmR1 HSERO_RS00200 LysR family transcriptional regulator insig. 35 98
  Shewanella amazonensis SB2B Sama_0586 LysR family transcriptional regulator (RefSeq) strong 34 99
  Shewanella sp. ANA-3 Shewana3_3435 LysR family transcriptional regulator (RefSeq) insig. 34 99
  Shewanella oneidensis MR-1 SO0843 transcriptional regulator, LysR family (NCBI ptt file) insig. 34 99
  Shewanella loihica PV-4 Shew_3562 LysR family transcriptional regulator (RefSeq) insig. 35 100
o Acinetobacter baumannii LAC-4 RR41_RS11345 LysR family transcriptional regulator insig. 31 99
  Desulfovibrio vulgaris Hildenborough JW710 DVU3313 transcriptional regulator, LysR family (TIGR) insig. 32 94
o Castellaniella sp019104865 MT123 ABCV34_RS09910 LysR family transcriptional regulator insig. 34 98
  Vibrio cholerae E7946 ATCC 55056 CSW01_08130 LysR family transcriptional regulator insig. 27 99
  Burkholderia phytofirmans PsJN BPHYT_RS10210 LysR family transcriptional regulator no data 34 84
  Pseudomonas putida KT2440 PP_3366 Transcriptional regulator, LysR family sig. 29 100
  Cupriavidus basilensis FW507-4G11 RR42_RS27195 LysR family transcriptional regulator insig. 32 98
  Pseudomonas sp. BP01 JOY50_RS14160 LysR family transcriptional regulator insig. 29 100
  Acidovorax sp. GW101-3H11 Ac3H11_1988 transcriptional regulator, LysR family insig. 32 95
  Desulfovibrio vulgaris Miyazaki F DvMF_2138 transcriptional regulator, LysR family (RefSeq) insig. 35 73
  Dechlorosoma suillum PS Dsui_0305 transcriptional regulator insig. 35 87
  Klebsiella pneumoniae MKP103 KDGMDA_23660 LysR family transcriptional regulator insig. 28 95
  Pectobacterium carotovorum WPP14 HER17_RS18045 LysR family transcriptional regulator cofit 27 93
  Acidovorax sp. GW101-3H11 Ac3H11_774 Transcriptional regulator, LysR family insig. 32 99
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.386.1 LysR family transcriptional regulator STM3121 insig. 32 90
  Variovorax sp. OAS795 ABID97_RS27955 LysR family transcriptional regulator insig. 31 97
  Pseudomonas aeruginosa MRSN321 DY961_RS11960 LysR family transcriptional regulator insig. 32 98
  Pseudomonas aeruginosa PUPa3 DQ20_RS50155 LysR family transcriptional regulator sig. 32 98
  Enterobacter asburiae PDN3 EX28DRAFT_2404 Transcriptional regulator insig. 31 99
  Pseudomonas aeruginosa PA14 IKLFDK_27380 LysR family transcriptional regulator insig. 32 98
  Pectobacterium carotovorum WPP14 HER17_RS10740 LysR family transcriptional regulator insig. 29 98
  Dickeya dianthicola 67-19 HGI48_RS03375 LysR family transcriptional regulator insig. 26 93
  Dickeya dadantii 3937 DDA3937_RS03225 LysR family transcriptional regulator insig. 26 93
  Enterobacter sp. TBS_079 MPMX20_01221 HTH-type transcriptional regulator BenM insig. 30 99
  Pseudomonas fluorescens SBW25 PFLU_RS12705 LysR family transcriptional regulator insig. 26 97
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12705 LysR family transcriptional regulator insig. 26 97
  Acinetobacter baumannii LAC-4 RR41_RS12920 LysR family transcriptional regulator no data 24 98
  Escherichia coli ECRC100 OKFHMN_08840 cynR transcriptional regulator CynR insig. 26 99
  Escherichia coli ECRC101 MCAODC_28070 cynR transcriptional regulator CynR insig. 26 99
  Escherichia coli ECRC102 NIAGMN_06895 cynR transcriptional regulator CynR insig. 26 99
  Escherichia coli ECRC98 JDDGAC_12495 cynR transcriptional regulator CynR insig. 26 99
  Escherichia coli ECRC99 KEDOAH_19125 cynR transcriptional regulator CynR no data 26 99
o Pseudomonas sp. RS175 PFR28_02477 HTH-type transcriptional regulator GltC insig. 34 99
  Pseudomonas sp. SVBP6 COO64_RS20175 LysR family transcriptional regulator insig. 32 99
  Pseudomonas fluorescens FW300-N2C3 AO356_06285 LysR family transcriptional regulator insig. 28 100
  Pseudomonas fluorescens SBW25 PFLU_RS21345 LysR family transcriptional regulator insig. 31 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21345 LysR family transcriptional regulator sig. 31 99
  Serratia liquefaciens MT49 IAI46_11680 LysR family transcriptional regulator insig. 31 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS32390 LysR family transcriptional regulator insig. 30 94
  Pseudomonas sp. SVBP6 COO64_RS13110 LysR family transcriptional regulator insig. 35 82
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS06410 LysR family transcriptional regulator insig. 31 99
  Rhodospirillum rubrum S1H Rru_A2782 Transcriptional Regulator, LysR family (NCBI) insig. 31 93
  Rahnella sp. WP5 EX31_RS04240 LysR family transcriptional regulator insig. 28 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3125 Transcriptional regulators, LysR family insig. 28 100
  Dickeya dianthicola ME23 DZA65_RS03420 LysR family transcriptional regulator insig. 26 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5005 LysR family transcriptional regulator STM2281 insig. 37 80
  Pseudomonas stutzeri RCH2 Psest_3707 Transcriptional regulator insig. 33 98
  Pseudomonas sp. S08-1 OH686_13195 Transcriptional regulator, LysR family strong 30 99
  Pseudomonas aeruginosa MRSN321 DY961_RS15015 LysR substrate-binding domain-containing protein strong 31 99
  Pseudomonas aeruginosa PA14 IKLFDK_18350 LysR family transcriptional regulator insig. 31 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS42120 LysR substrate-binding domain-containing protein insig. 31 99
  Pseudomonas aeruginosa MRSN321 DY961_RS10965 LysR family transcriptional regulator insig. 33 82