| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas putida KT2440 | PP_3605 | | Transcriptional regulator, LysR family | insig. | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS07450 | | LysR family transcriptional regulator | insig. | 90 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS25000 | | LysR family transcriptional regulator | insig. | 72 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS03805 | | LysR family transcriptional regulator | insig. | 67 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS34840 | | LysR family transcriptional regulator | insig. | 67 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_13465 | | LysR family transcriptional regulator | sig. | 67 | 100 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4236 | | Transcriptional regulator, LysR family | insig. | 60 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3681 | | Transcriptional regulator, LysR family | insig. | 55 | 99 |
| o | Pseudomonas sp. DMC3 | GFF1128 | | HTH-type transcriptional regulator DmlR | cofit | 54 | 99 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1731 | | Transcriptional regulator, LysR family | insig. | 56 | 97 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 36 | 97 |
| | Bosea sp. OAE506 | ABIE41_RS22155 | | LysR family transcriptional regulator | insig. | 40 | 92 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_19415 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS03985 | | LysR family transcriptional regulator | insig. | 39 | 100 |
| | Ralstonia solanacearum GMI1000 | RS_RS21490 | | LysR family transcriptional regulator | insig. | 38 | 100 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 34 | 95 |
| | Shewanella oneidensis MR-1 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 35 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30015 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| o | Pantoea sp. MT58 | IAI47_16445 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_02783 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 96 |
| | Xanthobacter sp. DMC5 | GFF3690 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01520 | | LysR family transcriptional regulator | insig. | 40 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS03475 | | LysR family transcriptional regulator | insig. | 39 | 96 |
| | Xanthobacter sp. DMC5 | GFF2907 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 99 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS08590 | | LysR family transcriptional regulator | cofit | 38 | 94 |
| | Pseudomonas simiae WCS417 | PS417_09485 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_1182 | | Transcriptional regulator | strong | 36 | 97 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06465 | | transcriptional regulator | cofit | 42 | 83 |
| | Bosea sp. OAE506 | ABIE41_RS06370 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Rahnella sp. WP5 | EX31_RS10405 | | LysR family transcriptional regulator | insig. | 35 | 92 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 36 | 100 |
| | Dechlorosoma suillum PS | Dsui_1892 | | transcriptional regulator | insig. | 40 | 95 |
| | Sphingobium sp. HT1-2 | GFF1839 | | Transcriptional regulator, LysR family | cofit | 39 | 96 |
| | Xanthobacter sp. DMC5 | GFF2647 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 87 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_22530 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03837 | | HTH-type transcriptional regulator PgrR | insig. | 39 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS26935 | | LysR substrate-binding domain-containing protein | insig. | 39 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29485 | | LysR family transcriptional regulator | insig. | 38 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS05555 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Dickeya dadantii 3937 | DDA3937_RS03165 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS11255 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11255 | | LysR family transcriptional regulator | strong | 37 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS33760 | | hypothetical protein | insig. | 39 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03714 | | transcriptional regulator, LysR family | insig. | 35 | 99 |
| | Rahnella sp. WP5 | EX31_RS16730 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1749 | | Cyn operon transcriptional activator | insig. | 37 | 88 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS04600 | | LysR family transcriptional regulator | insig. | 34 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12185 | | LysR family transcriptional regulator | insig. | 35 | 100 |
| | Pseudomonas simiae WCS417 | PS417_10920 | | LysR family transcriptional regulator | insig. | 37 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15095 | | LysR family transcriptional regulator | insig. | 38 | 95 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 37 | 93 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 35 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS39000 | | LysR family transcriptional regulator | insig. | 37 | 85 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 35 | 94 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS17325 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS04745 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01123 | | transcriptional regulator, LysR family | insig. | 40 | 90 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10340 | | LysR family transcriptional regulator | insig. | 37 | 97 |
| | Shewanella loihica PV-4 | Shew_2292 | | LysR family transcriptional regulator (RefSeq) | insig. | 36 | 93 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02449 | | HTH-type transcriptional regulator PgrR | strong | 37 | 94 |
| | Alteromonas macleodii MIT1002 | MIT1002_02674 | | D-malate degradation protein R | strong | 33 | 95 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01740 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 87 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0884 | | Transcriptional regulator | insig. | 37 | 95 |
| | Pseudomonas putida KT2440 | PP_3811 | | Transcriptional regulator, LysR family | insig. | 36 | 94 |
| | Rhodospirillum rubrum S1H | Rru_A2257 | | Transcriptional Regulator, LysR family (NCBI) | strong | 35 | 94 |
| | Pseudomonas sp. RS175 | PFR28_02643 | | HTH-type transcriptional regulator DmlR | insig. | 39 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS08715 | | LysR family transcriptional regulator | sig. | 37 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10025 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00160 | | LysR family transcriptional regulator | no data | 34 | 97 |
| | Ralstonia solanacearum UW163 | UW163_RS13490 | | LysR family transcriptional regulator | no data | 34 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 37 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05530 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Pseudomonas sp. RS175 | PFR28_04672 | | HTH-type transcriptional regulator DmlR | insig. | 37 | 88 |
| | Pseudomonas sp. RS175 | PFR28_04746 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_005907 | | DNA-binding transcriptional LysR family regulator | insig. | 36 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS06090 | | LysR family transcriptional regulator | insig. | 38 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS20365 | | LysR family transcriptional regulator | insig. | 35 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS11615 | | LysR family transcriptional regulator | sig. | 34 | 100 |
| | Pseudomonas simiae WCS417 | PS417_14590 | | LysR family transcriptional regulator | insig. | 36 | 88 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19880 | | LysR family transcriptional regulator | insig. | 36 | 96 |
| | Pseudomonas orientalis W4I3 | QF045_RS15190 | | LysR family transcriptional regulator | insig. | 37 | 88 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10570 | | LysR family transcriptional regulator | strong | 38 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS15825 | | LysR substrate-binding domain-containing protein | insig. | 37 | 90 |
| | Pseudomonas orientalis W4I3 | QF045_RS13235 | | LysR family transcriptional regulator | cofit | 36 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS14890 | | LysR family transcriptional regulator | insig. | 36 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | insig. | 34 | 95 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08360 | | LysR family transcriptional regulator | insig. | 34 | 92 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11295 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02887 | | transcriptional regulator, LysR family | no data | 37 | 95 |
| | Pseudomonas sp. S08-1 | OH686_14050 | | Transcriptional regulator, LysR family | insig. | 36 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01562 | | transcriptional regulator, LysR family | insig. | 36 | 96 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_10765 | | LysR family transcriptional regulator | insig. | 36 | 84 |
| | Ralstonia solanacearum GMI1000 | RS_RS06820 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_21990 | | LysR family transcriptional regulator | insig. | 33 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 33 | 97 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 35 | 90 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS08655 | | LysR family transcriptional regulator | sig. | 35 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS28830 | | LysR family transcriptional regulator | insig. | 35 | 95 |