Homologs of PP_2297 from Pseudomonas putida KT2440

putative integrative genetic element Ppu40, integrase
SEED: integrative genetic element Ppu40, integrase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2297 putative integrative genetic element Ppu40, integrase insig. 100 100
  Agrobacterium fabrum C58 Atu1194 phage-related integrase insig. 28 96
  Sinorhizobium meliloti 1021 SMc02397 integrase insig. 31 64
  Rhodanobacter denitrificans MT42 LRK55_RS00045 site-specific integrase insig. 32 55
  Sphingobium sp. HT1-2 GFF3220 Phage (Mu-like) virion morphogenesis protein cofit 28 76
  Klebsiella pneumoniae MKP103 KDGMDA_15045 integrase insig. 29 61
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03395 Tyrosine recombinase XerC insig. 28 65
  Ralstonia solanacearum GMI1000 RS_RS07820 site-specific integrase insig. 28 56
  Magnetospirillum magneticum AMB-1 AMB_RS18470 site-specific integrase insig. 29 56
  Dechlorosoma suillum PS Dsui_1127 site-specific recombinase XerD cofit 27 66
  Castellaniella sp019104865 MT123 ABCV34_RS02095 site-specific integrase insig. 32 58
  Marinobacter adhaerens HP15 HP15_3093 phage integrase family protein insig. 26 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01510 Integrase cofit 27 58
  Escherichia coli ECRC100 OKFHMN_09660 xerD integrase insig. 26 65
  Escherichia coli ECRC98 JDDGAC_13285 xerD integrase insig. 26 65
  Escherichia coli ECRC101 MCAODC_00180 xerD Site-specific recombinase XerD insig. 26 65
  Escherichia coli ECOR27 NOLOHH_00750 intD Prophage integrase IntD insig. 25 58
  Escherichia coli BW25113 b0537 intD DLP12 prophage; predicted integrase (NCBI) sig. 25 58
  Escherichia coli ECRC98 JDDGAC_09320 integrase strong 27 62
  Pseudomonas stutzeri RCH2 Psest_4123 Site-specific recombinase XerD sig. 26 90
  Pantoea sp. MT58 IAI47_02995 tyrosine-type recombinase/integrase insig. 31 45
  Bacteroides stercoris CC31F HMPREF1181_RS07155 site-specific integrase insig. 25 76
  Escherichia coli ECRC102 NIAGMN_07520 xerD integrase insig. 25 65
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0378 Site-specific recombinase XerD insig. 25 94
  Escherichia coli BL21 ECD_00486 DLP12 prophage; putative phage integrase insig. 25 56
  Magnetospirillum magneticum AMB-1 AMB_RS07530 site-specific integrase insig. 28 59
  Pseudomonas aeruginosa PUPa3 DQ20_RS55485 tyrosine-type recombinase/integrase insig. 26 56
  Pectobacterium carotovorum WPP14 HER17_RS05350 site-specific integrase insig. 25 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU1757 site-specific recombinase, phage integrase family (TIGR) insig. 25 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU2828 site-specific recombinase, phage integrase family (TIGR) insig. 33 38
  Rahnella sp. WP5 EX31_RS18465 tyrosine-type recombinase/integrase insig. 25 62
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02862 Tyrosine recombinase XerD insig. 25 91
  Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 27 66
  Burkholderia phytofirmans PsJN BPHYT_RS01250 integrase insig. 32 39
  Burkholderia phytofirmans PsJN BPHYT_RS35970 DNA recombinase insig. 32 56
  Escherichia fergusonii Becca EFB2_03259 Tyrosine recombinase XerC insig. 25 90
  Klebsiella pneumoniae MKP103 KDGMDA_17435 integrase insig. 25 88
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 27 66
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13965 site-specific integrase insig. 26 64
  Escherichia coli ECOR38 HEPCGN_04445 xerD integrase insig. 29 57
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 28 58
  Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 26 62
  Escherichia coli ECRC100 OKFHMN_26010 xerD integrase insig. 29 57
  Escherichia coli ECRC101 MCAODC_19380 xerD integrase insig. 29 57
  Escherichia coli ECRC98 JDDGAC_00600 xerD integrase insig. 29 57
  Escherichia coli ECRC99 KEDOAH_02080 xerD integrase no data 29 57
  Escherichia coli ECRC102 NIAGMN_02040 xerD integrase insig. 28 57
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4439 Site-specific recombinase XerD insig. 27 68
  Klebsiella michiganensis M5al BWI76_RS09185 integrase insig. 26 88
  Pseudomonas sp. SVBP6 COO64_RS20275 site-specific integrase insig. 31 57
  Escherichia coli BL21 ECD_00815 integrase for prophage insig. 25 86
  Desulfovibrio vulgaris Hildenborough JW710 DVU2197 site-specific recombinase, phage integrase family (TIGR) insig. 52 16
  Pseudomonas aeruginosa PA14 IKLFDK_05595 integrase insig. 29 40
  Pseudomonas aeruginosa PA14 IKLFDK_03615 Putative integrase sig. 27 58
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2340 Site-specific recombinase XerD insig. 28 49
  Ralstonia sp. UNC404CL21Col ABZR87_RS13170 site-specific integrase insig. 27 54
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11865 tyrosine-type recombinase/integrase insig. 27 61
  Escherichia coli ECRC101 MCAODC_20995 int Integrase insig. 25 69
  Ralstonia solanacearum GMI1000 RS_RS08345 site-specific integrase insig. 28 57
  Pseudomonas segetis P6 ACVTMO_RS06550 phage integrase insig. 26 48
  Pseudomonas sp. S08-1 OH686_07985 Phage integrase cofit 29 38
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_01645 Integrase no data 28 64
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_27510 Integrase no data 28 64
  Erwinia tracheiphila SCR3 LU632_RS01475 tyrosine-type recombinase/integrase sig. 28 64
  Ralstonia solanacearum PSI07 RPSI07_RS15520 site-specific integrase insig. 27 54
  Magnetospirillum magneticum AMB-1 AMB_RS18455 site-specific integrase insig. 24 59
  Methanococcus maripaludis JJ MMJJ_RS04325 tyrosine-type recombinase/integrase insig. 23 54
  Magnetospirillum magneticum AMB-1 AMB_RS04635 site-specific integrase cofit 32 38
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06960 site-specific integrase cofit 32 40
  Cupriavidus basilensis FW507-4G11 RR42_RS19640 hypothetical protein insig. 25 55
  Cupriavidus basilensis FW507-4G11 RR42_RS08460 integrase insig. 30 54
  Pseudomonas stutzeri RCH2 Psest_2903 Site-specific recombinase XerD insig. 29 37
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 26 55
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01075 site-specific integrase insig. 22 63
  Methanococcus maripaludis JJ MMJJ_RS02430 tyrosine-type recombinase/integrase no data 29 34
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4620 Probable DNA recombinase insig. 28 43
  Ralstonia solanacearum UW163 UW163_RS11435 site-specific integrase insig. 28 57
  Methanococcus maripaludis S2 MMP_RS03885 tyrosine-type recombinase/integrase insig. 27 37
  Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 27 58
  Methanococcus maripaludis S2 MMP_RS02510 site-specific integrase sig. 24 54
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_23350 integrase no data 28 39
  Shewanella oneidensis MR-1 SOA0044 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 24 64
  Pseudomonas aeruginosa MRSN321 DY961_RS08885 tyrosine-type recombinase/integrase cofit 24 87
  Pseudomonas syringae pv. syringae B728a Psyr_1475 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 28 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1475 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 28 56
  Pectobacterium carotovorum WPP14 HER17_RS07965 tyrosine-type recombinase/integrase insig. 27 56
  Bacteroides stercoris CC31F HMPREF1181_RS00625 tyrosine recombinase XerC cofit 26 66
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14800 hypothetical protein insig. 26 60
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01845 site-specific integrase insig. 22 63
  Pseudomonas syringae pv. syringae B728a Psyr_4646 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 29 56
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4646 Phage integrase:Phage integrase, N-terminal SAM-like protein insig. 29 56
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS11660 site-specific integrase no data 24 88
  Lysobacter sp. OAE881 ABIE51_RS12320 site-specific integrase insig. 30 36
  Dechlorosoma suillum PS Dsui_0138 site-specific recombinase XerD cofit 27 45
  Pseudomonas aeruginosa PUPa3 DQ20_RS43980 tyrosine-type recombinase/integrase insig. 24 87
  Pectobacterium carotovorum WPP14 HER17_RS18625 tyrosine-type recombinase/integrase cofit 29 43
  Azospirillum brasilense Sp245 AZOBR_RS03240 recombinase XerD insig. 29 47
  Pseudomonas segetis P6 ACVTMO_RS04260 phage integrase insig. 26 38
  Dickeya dianthicola 67-19 HGI48_RS02890 tyrosine-type recombinase/integrase insig. 26 45
  Phocaeicola dorei CL03T12C01 ABI39_RS16050 site-specific integrase insig. 22 63