Homologs of OHPLBJKB_01896 from Escherichia coli HS(pFamp)R (ATCC 700891)

Ribosomal RNA small subunit methyltransferase F
SEED: Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F insig. 100 100
o Escherichia coli ECOR38 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 98 100
o Escherichia fergusonii Becca EFB2_02166 Ribosomal RNA small subunit methyltransferase F insig. 98 100
o Escherichia coli ECOR27 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 98 100
o Escherichia coli ECRC62 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 98 100
o Escherichia coli BW25113 b1835 yebU putative nucleolar proteins (VIMSS) strong 98 100
o Escherichia coli BL21 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent no data 98 100
o Escherichia coli Nissle 1917 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 97 100
o Escherichia coli ECRC101 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 96 100
o Escherichia coli ECRC101 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 96 100
o Escherichia coli ECRC102 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 96 100
o Escherichia coli ECRC98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 96 100
o Escherichia coli ECRC99 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 96 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) sig. 85 100
o Enterobacter asburiae PDN3 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase insig. 80 99
o Enterobacter sp. TBS_079 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F insig. 82 96
o Klebsiella michiganensis M5al BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 79 100
o Pantoea sp. MT58 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF strong 69 99
o Serratia liquefaciens MT49 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 70 98
o Rahnella sp. WP5 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 68 97
o Pectobacterium carotovorum WPP14 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 67 97
o Dickeya dadantii 3937 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 65 98
o Dickeya dianthicola ME23 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 65 96
o Dickeya dianthicola 67-19 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 65 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 57 98
o Shewanella sp. ANA-3 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 54 96
o Shewanella oneidensis MR-1 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) insig. 54 96
o Shewanella loihica PV-4 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 53 97
o Shewanella amazonensis SB2B Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) sig. 52 97
o Kangiella aquimarina DSM 16071 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase insig. 48 96
o Bacteroides thetaiotaomicron VPI-5482 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) sig. 28 97
o Bacteroides stercoris CC31F HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase insig. 31 85
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05610 rRNA methyltransferase strong 32 96
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1153 tRNA and rRNA cytosine-C5-methylases insig. 28 97
o Bacteroides ovatus ATCC 8483 BACOVA_00671 NOL1/NOP2/sun family protein insig. 28 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00225 RNA methyltransferase strong 29 96
  Phocaeicola dorei CL03T12C01 ABI39_RS09930 rRNA cytosine-C5-methyltransferase sig. 31 79
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14300 rRNA cytosine-C5-methyltransferase sig. 31 79
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase insig. 30 97
  Acidovorax sp. GW101-3H11 Ac3H11_1706 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 34 55
  Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 37 46
  Desulfovibrio vulgaris Hildenborough JW710 DVU3189 NOL1/NOP2/sun family protein (TIGR) insig. 36 61
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF769 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 32 65
  Methanococcus maripaludis S2 MMP_RS05815 NOL1/NOP2/sun family putative RNA methylase strong 36 57
  Methanococcus maripaludis JJ MMJJ_RS08535 NOL1/NOP2/sun family putative RNA methylase strong 35 57
  Desulfovibrio vulgaris Miyazaki F DvMF_2026 Fmu (Sun) domain protein (RefSeq) insig. 34 57
  Fusobacterium nucleatum SB010 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 35 46
  Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 30 65
  Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 30 65
  Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 35 50
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 45
  Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 31 63
  Rhodospirillum rubrum S1H Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) cofit 34 46
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 31 56
  Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 31 56
  Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 36 44
  Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 37 45
  Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 37 45
  Ralstonia sp. UNC404CL21Col ABZR87_RS00375 RsmB/NOP family class I SAM-dependent RNA methyltransferase sig. 33 45
  Castellaniella sp019104865 MT123 ABCV34_RS05220 RsmB/NOP family class I SAM-dependent RNA methyltransferase cofit 31 59
  Dechlorosoma suillum PS Dsui_1543 tRNA/rRNA cytosine-C5-methylase sig. 31 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS03045 RsmB/NOP family class I SAM-dependent RNA methyltransferase strong 29 58
  Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 30 63
  Paraburkholderia graminis OAS925 ABIE53_003297 16S rRNA (cytosine967-C5)-methyltransferase insig. 30 56
  Ralstonia solanacearum PSI07 RPSI07_RS23575 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 29 64
  Azospirillum sp. SherDot2 MPMX19_02327 Ribosomal RNA small subunit methyltransferase B insig. 33 54
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04074 16S rRNA (cytosine967-C5)-methyltransferase insig. 30 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS04950 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 30 63
  Variovorax sp. SCN45 GFF6043 tRNA/rRNA cytosine-C5-methylase insig. 30 62
  Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 34 49
  Burkholderia phytofirmans PsJN BPHYT_RS15665 SAM-dependent methyltransferase no data 29 56
  Variovorax sp. OAS795 ABID97_RS07795 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 28 64
  Alteromonas macleodii MIT1002 MIT1002_00018 Ribosomal RNA small subunit methyltransferase B cofit 31 56
  Azospirillum sp. SherDot2 MPMX19_01594 Ribosomal RNA small subunit methyltransferase B insig. 28 56
  Rhizobium sp. OAE497 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 49
  Cupriavidus basilensis FW507-4G11 RR42_RS17045 SAM-dependent methyltransferase sig. 28 58
  Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 33 49
  Rhodanobacter sp. FW510-T8 OKGIIK_13790 rsmB 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 56
  Rhodopseudomonas palustris CGA009 TX73_011365 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 31 56
  Agrobacterium fabrum C58 Atu2825 Sun protein sig. 32 45
  Sinorhizobium meliloti 1021 SMc04090 sun protein insig. 31 50
  Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 33 45
  Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 31 45
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 29 63
  Ralstonia solanacearum UW163 UW163_RS03790 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 29 63
  Cupriavidus basilensis FW507-4G11 RR42_RS20450 16S rRNA methyltransferase strong 29 63
  Shewanella amazonensis SB2B Sama_0041 sun protein (RefSeq) strong 33 40
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2239 tRNA and rRNA cytosine-C5-methylases insig. 33 45
  Ralstonia solanacearum GMI1000 RS_RS00375 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 29 64
  Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 31 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS00175 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 29 63
  Pseudomonas fluorescens SBW25 PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 57
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00080 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 32 57
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0881 tRNA and rRNA cytosine-C5-methylases insig. 31 56
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2390 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) ## SSU rRNA m5C967 cofit 33 45
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4741.1 hypothetical protein insig. 29 56
  Sinorhizobium meliloti 1021 SMc00403 NOL1/NOP2/SUN family signature protein strong 33 50
  Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 33 45
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1789 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) insig. 30 59
  Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 30 63