Homologs of IAI47_08680 from Pantoea sp. MT58

16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
SEED: Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-)
KEGG: ribosomal RNA small subunit methyltransferase F

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pantoea sp. MT58 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF strong 100 100
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02510 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 93 98
o Escherichia coli ECRC100 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 69 99
o Escherichia coli ECRC102 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 69 99
o Escherichia coli ECRC98 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 69 99
o Escherichia coli ECRC99 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 69 99
o Escherichia coli ECRC101 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 69 97
o Escherichia coli ECOR27 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 69 97
o Escherichia coli BL21 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent no data 69 97
o Escherichia coli ECRC62 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 69 97
o Escherichia coli ECOR38 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 69 97
o Escherichia fergusonii Becca EFB2_02166 Ribosomal RNA small subunit methyltransferase F insig. 69 97
o Escherichia coli BW25113 b1835 yebU putative nucleolar proteins (VIMSS) strong 69 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F insig. 69 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) sig. 68 98
o Erwinia amylovora T8 OLJFJH_12985 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 70 96
o Escherichia coli Nissle 1917 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF no data 68 97
o Enterobacter asburiae PDN3 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase insig. 69 97
o Enterobacter sp. TBS_079 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F insig. 71 94
o Klebsiella pneumoniae MKP103 KDGMDA_25270 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 72 94
o Klebsiella michiganensis M5al BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 70 98
o Serratia liquefaciens MT49 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 67 96
o Rahnella sp. WP5 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF sig. 66 97
o Pectobacterium carotovorum WPP14 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 64 95
o Dickeya dianthicola ME23 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 63 94
o Dickeya dadantii 3937 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 63 94
o Dickeya dianthicola 67-19 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF insig. 63 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF cofit 57 96
o Shewanella loihica PV-4 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 54 94
o Shewanella oneidensis MR-1 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) insig. 54 95
o Shewanella sp. ANA-3 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) insig. 54 95
o Kangiella aquimarina DSM 16071 B158DRAFT_0839 NOL1/NOP2/sun family putative RNA methylase insig. 50 94
o Shewanella amazonensis SB2B Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) sig. 51 94
o Bacteroides stercoris CC31F HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase insig. 30 95
o Bacteroides thetaiotaomicron VPI-5482 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) sig. 29 95
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00225 RNA methyltransferase strong 30 94
o Bacteroides ovatus ATCC 8483 BACOVA_00671 NOL1/NOP2/sun family protein sig. 30 95
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1153 tRNA and rRNA cytosine-C5-methylases insig. 29 95
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05610 rRNA methyltransferase strong 31 94
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14300 rRNA cytosine-C5-methyltransferase strong 29 89
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase insig. 28 94
o Phocaeicola dorei CL03T12C01 ABI39_RS09930 rRNA cytosine-C5-methyltransferase sig. 29 89
  Synechococcus elongatus PCC 7942 Synpcc7942_0962 sun sun protein sig. 33 59
  Methanococcus maripaludis S2 MMP_RS05815 NOL1/NOP2/sun family putative RNA methylase strong 35 56
  Methanococcus maripaludis JJ MMJJ_RS08535 NOL1/NOP2/sun family putative RNA methylase strong 33 56
  Desulfovibrio vulgaris Miyazaki F DvMF_2026 Fmu (Sun) domain protein (RefSeq) insig. 35 56
  Desulfovibrio vulgaris Hildenborough JW710 DVU3189 NOL1/NOP2/sun family protein (TIGR) insig. 35 57
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13165 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 37 45
  Synechocystis sp000284455 PCC 6803 SGL_RS03855 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 31 62
  Acidovorax sp. GW101-3H11 Ac3H11_1706 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 32 58
  Ralstonia solanacearum GMI1000 RS_RS12315 SAM-dependent methyltransferase sig. 33 56
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04755 SAM-dependent methyltransferase strong 33 56
  Ralstonia solanacearum UW163 UW163_RS08915 SAM-dependent methyltransferase insig. 33 56
  Caulobacter crescentus NA1000 CCNA_00101 16S rRNA m5C methyltransferase RsmB sig. 38 44
  Caulobacter crescentus NA1000 Δfur CCNA_00101 16S rRNA m5C methyltransferase RsmB cofit 38 44
  Ralstonia solanacearum PSI07 RPSI07_RS12630 SAM-dependent methyltransferase insig. 33 56
  Fusobacterium nucleatum SB010 HUW76_07955 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB strong 34 46
  Magnetospirillum magneticum AMB-1 AMB_RS19160 methyltransferase domain-containing protein cofit 32 55
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF769 Fmu (Sun) /eukaryotic nucleolar NOL1/Nop2p; tRNA and rRNA cytosine-C5-methylases insig. 32 62
  Dechlorosoma suillum PS Dsui_1543 tRNA/rRNA cytosine-C5-methylase sig. 31 58
  Xanthobacter sp. DMC5 GFF12 Ribosomal RNA small subunit methyltransferase B insig. 32 60
  Herbaspirillum seropedicae SmR1 HSERO_RS05915 SAM-dependent methyltransferase sig. 28 61
  Ralstonia sp. UNC404CL21Col ABZR87_RS00375 RsmB/NOP family class I SAM-dependent RNA methyltransferase sig. 35 45
  Bosea sp. OAE506 ABIE41_RS05105 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 36 44
  Methylophilus sp. DMC18 GFF2298 Ribosomal RNA small subunit methyltransferase B insig. 30 56
  Azospirillum sp. SherDot2 MPMX19_01594 Ribosomal RNA small subunit methyltransferase B insig. 30 66
  Pantoea sp. MT58 IAI47_02280 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 36 40
  Dinoroseobacter shibae DFL-12 Dshi_3033 Fmu (Sun) domain protein (RefSeq) sig. 36 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS03045 RsmB/NOP family class I SAM-dependent RNA methyltransferase strong 28 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_00225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 30 62
  Sphingobium sp. HT1-2 GFF3272 16S rRNA (cytosine(967)-C(5))-methyltransferase (EC 2.1.1.176) insig. 31 50
  Rhizobium sp. OAE497 ABIE40_RS19140 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 49
  Variovorax sp. SCN45 GFF6043 tRNA/rRNA cytosine-C5-methylase insig. 29 61
  Paraburkholderia graminis OAS925 ABIE53_003297 16S rRNA (cytosine967-C5)-methyltransferase insig. 28 55
  Enterobacter asburiae PDN3 EX28DRAFT_0039 16S rRNA (cytosine(967)-C(5))-methyltransferase cofit 35 44
  Variovorax sp. OAS795 ABID97_RS07795 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 30 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04074 16S rRNA (cytosine967-C5)-methyltransferase insig. 28 55
  Burkholderia phytofirmans PsJN BPHYT_RS15665 SAM-dependent methyltransferase no data 28 55
  Rhodospirillum rubrum S1H Rru_A0243 tRNA/rRNA cytosine-C5-methylase (NCBI) cofit 32 48
  Caulobacter crescentus NA1000 CCNA_01691 tRNA/rRNA methyltransferase strong 30 56
  Caulobacter crescentus NA1000 Δfur CCNA_01691 tRNA/rRNA methyltransferase cofit 30 56
  Magnetospirillum magneticum AMB-1 AMB_RS00745 MFS transporter insig. 36 45
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS22525 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 32 48
  Marinobacter adhaerens HP15 HP15_3742 Fmu, rRNA SAM-dependent methyltransferase strong 29 64
  Xanthobacter sp. DMC5 GFF3851 Ribosomal RNA small subunit methyltransferase B no data 36 40
  Azospirillum brasilense Sp245 AZOBR_RS00235 MFS transporter sig. 34 44
  Bosea sp. OAE506 ABIE41_RS15995 RsmB/NOP family class I SAM-dependent RNA methyltransferase insig. 33 45
  Pseudomonas stutzeri RCH2 Psest_0021 ribosomal RNA small subunit methyltransferase RsmB sig. 30 56
  Rhodopseudomonas palustris CGA009 TX73_000155 transcription antitermination factor NusB insig. 32 49
  Enterobacter sp. TBS_079 MPMX20_04196 Ribosomal RNA small subunit methyltransferase B sig. 36 39
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0881 tRNA and rRNA cytosine-C5-methylases insig. 31 55
  Sinorhizobium meliloti 1021 SMc04090 sun protein insig. 32 45
  Lysobacter sp. OAE881 ABIE51_RS02255 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 26 65
  Dickeya dianthicola ME23 DZA65_RS20350 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB insig. 34 40
  Cellulophaga baltica 18 M666_RS18250 methyltransferase domain-containing protein insig. 28 64
  Dickeya dianthicola 67-19 HGI48_RS19225 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 34 40
  Dickeya dadantii 3937 DDA3937_RS19135 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB cofit 33 45
  Klebsiella michiganensis M5al BWI76_RS25680 16S rRNA m5C967 methyltransferase strong 32 48
  Xanthobacter sp. DMC5 GFF4611 Ribosomal RNA small subunit methyltransferase B insig. 30 56
  Phaeobacter inhibens DSM 17395 PGA1_c32880 putative ribosomal RNA small subunit methyltransferase B sig. 32 45