| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS16420 | | RNA polymerase sigma factor RpoD/SigA | no data | 100 | 100 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_00615 | | Sigma-70 region 2 | no data | 94 | 100 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS10780 | | RNA polymerase sigma factor RpoD/SigA | no data | 94 | 100 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT1311 | | RNA polymerase sigma factor rpoD (Sigma-A) (NCBI ptt file) | no data | 94 | 100 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS13985 | | RNA polymerase sigma factor RpoD/SigA | no data | 94 | 100 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS17770 | | RNA polymerase sigma factor RpoD/SigA | no data | 94 | 100 |
| o | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04285 | | RNA polymerase sigma factor RpoD | no data | 76 | 100 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS15895 | | RNA polymerase sigma factor RpoD/SigA | no data | 76 | 100 |
| o | Cellulophaga baltica 18 | M666_RS08520 | | sigma-70 family RNA polymerase sigma factor | strong | 72 | 100 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_04885 | | RNA polymerase subunit sigma | no data | 75 | 100 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_3437 | | RNA polymerase sigma factor, sigma-70 family | no data | 74 | 100 |
| | Cellulophaga baltica 18 | M666_RS16995 | | RNA polymerase sigma factor RpoD/SigA | insig. | 67 | 100 |
| | Cellulophaga baltica 18 | M666_RS16155 | | RNA polymerase sigma factor RpoD/SigA | insig. | 60 | 100 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS16485 | | RNA polymerase sigma factor RpoD/SigA | insig. | 61 | 96 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0494 | | RNA polymerase, sigma 70 subunit, RpoD subfamily (RefSeq) | no data | 44 | 86 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1788 | rpoD | RNA polymerase sigma-70 factor (TIGR) | no data | 45 | 85 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS03585 | | RNA polymerase sigma factor RpoD | no data | 39 | 96 |
| | Klebsiella michiganensis M5al | BWI76_RS24555 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Shewanella amazonensis SB2B | Sama_0823 | | RNA polymerase sigma-70 factor (RefSeq) | no data | 45 | 83 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_4238 | | RNA polymerase sigma factor RpoD, C-terminal domain | no data | 41 | 87 |
| | Shewanella sp. ANA-3 | Shewana3_3087 | | RNA polymerase, sigma 70 subunit, RpoD (RefSeq) | no data | 45 | 83 |
| | Escherichia coli BL21 | ECD_02937 | | RNA polymerase, sigma 70 (sigma D) factor | no data | 42 | 92 |
| | Dickeya dadantii 3937 | DDA3937_RS02945 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia fergusonii Becca | EFB2_00744 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECOR27 | NOLOHH_10445 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECOR38 | HEPCGN_17510 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC100 | OKFHMN_18655 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC101 | MCAODC_09170 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC102 | NIAGMN_16420 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC62 | BNILDI_01070 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC98 | JDDGAC_22290 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli ECRC99 | KEDOAH_09490 | rpoD | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00635 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Erwinia amylovora T8 | OLJFJH_07585 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Escherichia coli BW25113 | b3067 | rpoD | RNA polymerase sigma factor (NCBI) | no data | 42 | 92 |
| | Pectobacterium carotovorum WPP14 | HER17_RS18415 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Erwinia tracheiphila SCR3 | LU632_RS20725 | rpoD | RNA polymerase sigma factor RpoD | no data | 41 | 97 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2261 | | RNA polymerase, sigma 70 subunit, RpoD family (RefSeq) | no data | 41 | 86 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c08800 | | RNA polymerase sigma factor RpoD | no data | 40 | 92 |
| | Shewanella oneidensis MR-1 | SO1284 | rpoD | RNA polymerase sigma-70 factor (NCBI ptt file) | no data | 45 | 83 |
| | Shewanella loihica PV-4 | Shew_0996 | | RpoD family RNA polymerase sigma factor (RefSeq) | no data | 45 | 83 |
| | Dickeya dianthicola 67-19 | HGI48_RS03110 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Dickeya dianthicola ME23 | DZA65_RS03105 | | RNA polymerase sigma factor RpoD | no data | 42 | 92 |
| | Rhodospirillum rubrum S1H | Rru_A2882 | | Sigma 70 (RpoD) (NCBI) | no data | 40 | 92 |
| | Rhizobium sp. OAE497 | ABIE40_RS12720 | | RNA polymerase sigma factor RpoD | no data | 40 | 92 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_0818 | | RNA polymerase sigma factor, sigma-70 family | no data | 44 | 83 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10595 | | RNA polymerase sigma factor RpoD | no data | 41 | 86 |
| | Sinorhizobium meliloti 1021 | SMc01563 | | RNA polymerase sigma factor RpoD | no data | 40 | 92 |
| | Pseudomonas stutzeri RCH2 | Psest_2806 | | RNA polymerase sigma factor RpoS | strong | 44 | 92 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3102 | | RNA polymerase, sigma 70 subunit, RpoD | no data | 41 | 92 |
| | Enterobacter sp. TBS_079 | MPMX20_03909 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Rahnella sp. WP5 | EX31_RS08195 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_22530 | | RNA polymerase sigma factor RpoD | no data | 42 | 89 |
| | Serratia liquefaciens MT49 | IAI46_22125 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Agrobacterium fabrum C58 | Atu2167 | | RNA polymerase sigma factor RpoD | no data | 40 | 92 |
| | Xanthobacter sp. DMC5 | GFF3244 | | RNA polymerase sigma factor RpoD | no data | 42 | 87 |
| | Caulobacter crescentus NA1000 | CCNA_03142 | | RNA polymerase sigma factor rpoD | no data | 40 | 91 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03142 | | RNA polymerase sigma factor rpoD | no data | 40 | 91 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.4729.1 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Pantoea sp. MT58 | IAI47_03050 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS13945 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Bosea sp. OAE506 | ABIE41_RS11995 | | RNA polymerase sigma factor RpoD | no data | 42 | 87 |
| | Azospirillum sp. SherDot2 | MPMX19_00761 | | RNA polymerase sigma factor RpoD | no data | 40 | 93 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18495 | | RNA polymerase sigma factor RpoS | sig. | 42 | 94 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3177 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Rhodopseudomonas palustris CGA009 | TX73_006610 | | RNA polymerase sigma factor RpoD | no data | 40 | 87 |
| | Pseudomonas sp. S08-1 | OH686_18185 | | RNA polymerase sigma factor RpoS | cofit | 44 | 89 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_02745 | | RNA polymerase sigma factor RpoD | no data | 41 | 92 |
| | Azospirillum brasilense Sp245 | AZOBR_RS10905 | | RNA polymerase sigma factor RpoD | no data | 39 | 93 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_13865 | rpoD | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas sp. S08-1 | OH686_14970 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Shewanella loihica PV-4 | Shew_1213 | | RpoD family RNA polymerase sigma factor (RefSeq) | insig. | 43 | 88 |
| | Pseudomonas stutzeri RCH2 | Psest_3682 | | RNA polymerase sigma factor, sigma-70 family | no data | 42 | 93 |
| | Lysobacter sp. OAE881 | ABIE51_RS02310 | | RNA polymerase sigma factor RpoD | no data | 40 | 92 |
| o | Mycobacterium tuberculosis H37Rv | Rv2710 | | RNA polymerase sigma factor SigB | no data | 41 | 97 |
| | Pseudomonas sp. RS175 | PFR28_04078 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4641 | | RNA polymerase, sigma 70 subunit, RpoD | no data | 44 | 83 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4641 | | RNA polymerase, sigma 70 subunit, RpoD | no data | 44 | 83 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_14265 | | RNA polymerase subunit sigma-70 | no data | 44 | 83 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4791 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas simiae WCS417 | PS417_06365 | | RNA polymerase sigma factor | strong | 44 | 89 |
| | Pseudomonas sp. DMC3 | GFF51 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1186 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2513 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07385 | | RNA polymerase subunit sigma-70 | no data | 44 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS27535 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS27535 | | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Pseudomonas simiae WCS417 | PS417_25880 | | RNA polymerase subunit sigma-70 | no data | 44 | 83 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS07055 | | RNA polymerase sigma factor RpoD | no data | 43 | 83 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS07325 | | RNA polymerase sigma factor RpoD | no data | 43 | 83 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS01085 | | RNA polymerase sigma factor RpoD | no data | 43 | 83 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | cofit | 44 | 89 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS06430 | | RNA polymerase sigma factor RpoS | strong | 44 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS22580 | rpoD | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Fusobacterium nucleatum SB010 | HUW76_03650 | | RNA polymerase sigma factor RpoD | no data | 43 | 94 |
| | Pseudomonas putida KT2440 | PP_0387 | | RNA polymerase, sigma 70 (sigma D) factor | no data | 42 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS19795 | rpoS | RNA polymerase sigma factor RpoS | insig. | 44 | 89 |
| | Pseudomonas sp. BP01 | JOY50_RS18070 | rpoD | RNA polymerase sigma factor RpoD | no data | 44 | 83 |
| | Bifidobacterium breve UCC2003 | BBR_RS16480 | | RNA polymerase sigma factor | no data | 39 | 93 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1374 | | RNA polymerase, sigma 38 subunit, RpoS | sig. | 44 | 89 |