Homologs of HMPREF1078_RS04425 from Parabacteroides merdae CL09T00C40

lytic transglycosylase domain-containing protein
SEED: Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)
KEGG: membrane-bound lytic murein transglycosylase D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04425 lytic transglycosylase domain-containing protein cofit 100 100
  Bacteroides stercoris CC31F HMPREF1181_RS09200 transglycosylase SLT domain-containing protein insig. 53 73
  Bacteroides ovatus ATCC 8483 BACOVA_04818 transglycosylase SLT domain protein sig. 52 73
o Bacteroides thetaiotaomicron VPI-5482 BT3999 membrane-bound lytic murein transglycosylase D presursor (NCBI ptt file) strong 48 81
o Phocaeicola dorei CL03T12C01 ABI39_RS09715 lytic transglycosylase domain-containing protein sig. 50 82
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14065 lytic transglycosylase domain-containing protein sig. 50 81
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19005 lytic transglycosylase insig. 38 83
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14535 lytic transglycosylase sig. 40 83
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4079 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) insig. 37 84
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18295 lytic transglycosylase domain-containing protein insig. 38 84
  Desulfovibrio vulgaris Hildenborough JW710 DVU0041 transglycosylase, SLT family (TIGR) insig. 30 78
  Pseudomonas sp. RS175 PFR28_01551 Membrane-bound lytic murein transglycosylase D insig. 34 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) strong 33 75
  Pseudomonas fluorescens FW300-N2C3 AO356_24475 lytic transglycosylase strong 33 75
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) no data 34 75
  Pseudomonas fluorescens FW300-N2E3 AO353_23485 lytic transglycosylase strong 34 75
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) strong 33 75
  Kangiella aquimarina DSM 16071 B158DRAFT_1060 FOG: LysM repeat strong 32 75
o Rahnella sp. WP5 EX31_RS21205 murein transglycosylase D cofit 32 81
  Pseudomonas putida KT2440 PP_4145 Membrane-bound lytic murein transglycosylase D insig. 31 75
o Escherichia fergusonii Becca EFB2_03832 Membrane-bound lytic murein transglycosylase D insig. 31 81
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4256 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 30 69
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4043 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 31 81
  Desulfovibrio vulgaris Miyazaki F DvMF_2218 Lytic transglycosylase catalytic (RefSeq) strong 30 80
o Escherichia coli BL21 ECD_00204 putative membrane-bound lytic murein transglycosylase D cofit 30 81
o Escherichia coli ECOR38 HEPCGN_07925 mltD murein transglycosylase D cofit 30 81
o Escherichia coli ECRC100 OKFHMN_09985 mltD murein transglycosylase D cofit 30 81
o Escherichia coli ECRC101 MCAODC_00500 mltD murein transglycosylase D cofit 30 81
o Escherichia coli ECRC102 NIAGMN_07835 mltD murein transglycosylase D insig. 30 81
o Escherichia coli ECRC98 JDDGAC_13580 mltD murein transglycosylase D cofit 30 81
o Escherichia coli ECRC99 KEDOAH_18170 mltD murein transglycosylase D no data 30 81
o Escherichia coli Nissle 1917 ECOLIN_RS01155 murein transglycosylase D cofit 30 81
o Escherichia coli BW25113 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) strong 30 81
o Escherichia coli ECOR27 NOLOHH_02330 mltD murein transglycosylase D cofit 30 81
o Escherichia coli ECRC62 BNILDI_09340 mltD murein transglycosylase D cofit 30 81
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03450 Membrane-bound lytic murein transglycosylase D cofit 30 81
  Pseudomonas syringae pv. syringae B728a Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N insig. 29 75
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N insig. 29 75
  Shewanella loihica PV-4 Shew_2115 lytic transglycosylase, catalytic (RefSeq) strong 30 82
  Pseudomonas simiae WCS417 PS417_12215 lytic transglycosylase sig. 32 75
o Enterobacter sp. TBS_079 MPMX20_00896 Membrane-bound lytic murein transglycosylase D insig. 31 81
o Klebsiella michiganensis M5al BWI76_RS05435 murein transglycosylase D sig. 32 81
  Pseudomonas fluorescens SBW25 PFLU_RS12905 transglycosylase SLT domain-containing protein cofit 32 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12905 transglycosylase SLT domain-containing protein sig. 32 75
o Enterobacter asburiae PDN3 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) cofit 31 81
  Marinobacter adhaerens HP15 HP15_1806 membrane-bound lytic murein transglycosylase D precursor strong 31 80
  Herbaspirillum seropedicae SmR1 HSERO_RS17125 lytic murein transglycosylase sig. 29 80
o Pectobacterium carotovorum WPP14 HER17_RS05450 murein transglycosylase D cofit 30 81
o Castellaniella sp019104865 MT123 ABCV34_RS10490 transglycosylase SLT domain-containing protein insig. 29 80
o Dickeya dianthicola 67-19 HGI48_RS16185 murein transglycosylase D cofit 29 81
o Serratia liquefaciens MT49 IAI46_04130 murein transglycosylase D cofit 29 81
  Pseudomonas sp. S08-1 OH686_03585 Membrane-bound lytic murein transglycosylase D cofit 31 75
o Dickeya dianthicola ME23 DZA65_RS17270 murein transglycosylase D sig. 29 81
  Alteromonas macleodii MIT1002 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor cofit 30 75
o Shewanella sp. ANA-3 Shewana3_2370 MltD domain-containing protein (RefSeq) no data 28 82
  Shewanella oneidensis MR-1 SO2564 transglycosylase, Slt family (NCBI ptt file) strong 29 82
  Pseudomonas stutzeri RCH2 Psest_2070 FOG: LysM repeat sig. 31 74
o Pantoea sp. MT58 IAI47_15345 murein transglycosylase D sig. 30 81
o Dickeya dadantii 3937 DDA3937_RS16065 murein transglycosylase D cofit 29 81
  Erwinia tracheiphila SCR3 LU632_RS01075 mltD murein transglycosylase D insig. 29 80
  Acidovorax sp. GW101-3H11 Ac3H11_477 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) sig. 28 80
  Dechlorosoma suillum PS Dsui_2797 LysM repeat-containing protein strong 29 81
  Shewanella sp. ANA-3 Shewana3_3584 MltD domain-containing protein (RefSeq) cofit 28 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_11400 lytic transglycosylase insig. 31 75
  Paraburkholderia graminis OAS925 ABIE53_003006 membrane-bound lytic murein transglycosylase D strong 29 69
  Shewanella oneidensis MR-1 SO4017 transglycosylase, Slt family (NCBI ptt file) insig. 27 91
  Ralstonia solanacearum PSI07 RPSI07_RS15235 lytic transglycosylase strong 30 80
  Burkholderia phytofirmans PsJN BPHYT_RS14205 lytic transglycosylase sig. 30 62
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02210 lytic transglycosylase cofit 30 80
  Ralstonia solanacearum UW163 UW163_RS15520 lytic transglycosylase insig. 30 80
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04400 membrane-bound lytic murein transglycosylase D strong 28 73
  Ralstonia sp. UNC404CL21Col ABZR87_RS14160 transglycosylase SLT domain-containing protein sig. 30 80
  Cupriavidus basilensis FW507-4G11 RR42_RS13565 lytic transglycosylase strong 30 80
  Variovorax sp. SCN45 GFF1116 Membrane-bound lytic murein transglycosylase D insig. 28 80
  Bacteroides ovatus ATCC 8483 BACOVA_05293 transglycosylase SLT domain protein insig. 36 45
  Paraburkholderia sabiae LMG 24235 QEN71_RS04765 transglycosylase SLT domain-containing protein strong 35 46
  Variovorax sp. OAS795 ABID97_RS14725 transglycosylase SLT domain-containing protein strong 33 51
  Shewanella amazonensis SB2B Sama_1885 Slt family transglycosylase (RefSeq) strong 27 75
  Acinetobacter radioresistens SK82 MPMX26_02274 hypothetical protein strong 38 38
  Bacteroides stercoris CC31F HMPREF1181_RS13790 lytic transglycosylase domain-containing protein insig. 35 44
  Bacteroides thetaiotaomicron VPI-5482 BT4487 putative membrane-bound lytic murein transglycosylase (NCBI ptt file) strong 35 44
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08920 lytic transglycosylase domain-containing protein insig. 35 45
  Phocaeicola dorei CL03T12C01 ABI39_RS03040 lytic transglycosylase domain-containing protein cofit 34 45
  Pseudomonas syringae pv. syringae B728a Psyr_1189 SLT:MLTD_N insig. 35 42
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1189 SLT:MLTD_N insig. 35 42
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4522 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 36 36
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00830 lytic transglycosylase domain-containing protein insig. 36 38
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1205 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) strong 34 38
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25070 murein transglycosylase strong 40 27
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18665 lytic transglycosylase domain-containing protein strong 39 28
  Lysobacter sp. OAE881 ABIE51_RS14110 lytic transglycosylase domain-containing protein insig. 27 57
  Shewanella amazonensis SB2B Sama_1186 Slt family transglycosylase (RefSeq) insig. 27 57
  Rhodanobacter sp. FW510-T8 OKGIIK_08005 Lytic transglycosylase insig. 25 57
  Rhodanobacter denitrificans MT42 LRK55_RS16485 transglycosylase SLT domain-containing protein strong 24 56
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08480 murein transglycosylase insig. 33 40
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16760 transglycosylase SLT domain-containing protein strong 24 56
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07290 LysM peptidoglycan-binding domain-containing protein insig. 23 56
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1949.1 membrane-bound lytic murein transglycosylase D precursor insig. 27 72
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0057 FOG: LysM repeat strong 24 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4037.1 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 24 55