Homologs of HMPREF1078_RS00830 from Parabacteroides merdae CL09T00C40

lytic transglycosylase domain-containing protein
SEED: Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS00830 lytic transglycosylase domain-containing protein insig. 100 100
o Bacteroides thetaiotaomicron VPI-5482 BT4487 putative membrane-bound lytic murein transglycosylase (NCBI ptt file) strong 51 100
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08920 lytic transglycosylase domain-containing protein insig. 50 99
o Phocaeicola dorei CL03T12C01 ABI39_RS03040 lytic transglycosylase domain-containing protein cofit 50 99
o Bacteroides ovatus ATCC 8483 BACOVA_05293 transglycosylase SLT domain protein insig. 51 100
o Bacteroides stercoris CC31F HMPREF1181_RS13790 lytic transglycosylase domain-containing protein insig. 50 96
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1205 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) strong 44 78
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08480 murein transglycosylase insig. 41 90
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS25070 murein transglycosylase strong 38 66
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4079 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) insig. 30 86
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18665 lytic transglycosylase domain-containing protein strong 37 54
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14535 lytic transglycosylase sig. 33 67
  Desulfovibrio vulgaris Miyazaki F DvMF_2218 Lytic transglycosylase catalytic (RefSeq) strong 35 64
  Bacteroides ovatus ATCC 8483 BACOVA_04818 transglycosylase SLT domain protein sig. 31 78
  Bacteroides thetaiotaomicron VPI-5482 BT3999 membrane-bound lytic murein transglycosylase D presursor (NCBI ptt file) strong 31 78
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04425 lytic transglycosylase domain-containing protein cofit 36 60
  Desulfovibrio vulgaris Hildenborough JW710 DVU0041 transglycosylase, SLT family (TIGR) insig. 29 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4522 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 34 57
  Enterobacter asburiae PDN3 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) cofit 30 73
  Escherichia coli BL21 ECD_00204 putative membrane-bound lytic murein transglycosylase D cofit 30 73
  Escherichia fergusonii Becca EFB2_03832 Membrane-bound lytic murein transglycosylase D insig. 30 73
  Escherichia coli Nissle 1917 ECOLIN_RS01155 murein transglycosylase D cofit 30 73
  Escherichia coli BW25113 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) strong 30 73
  Escherichia coli ECOR27 NOLOHH_02330 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECOR38 HEPCGN_07925 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECRC100 OKFHMN_09985 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECRC101 MCAODC_00500 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECRC102 NIAGMN_07835 mltD murein transglycosylase D insig. 30 73
  Escherichia coli ECRC62 BNILDI_09340 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECRC98 JDDGAC_13580 mltD murein transglycosylase D cofit 30 73
  Escherichia coli ECRC99 KEDOAH_18170 mltD murein transglycosylase D no data 30 73
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03450 Membrane-bound lytic murein transglycosylase D cofit 30 73
  Bacteroides stercoris CC31F HMPREF1181_RS09200 transglycosylase SLT domain-containing protein insig. 33 66
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14065 lytic transglycosylase domain-containing protein sig. 30 70
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS19005 lytic transglycosylase insig. 31 66
  Enterobacter sp. TBS_079 MPMX20_00896 Membrane-bound lytic murein transglycosylase D insig. 29 73
  Phocaeicola dorei CL03T12C01 ABI39_RS09715 lytic transglycosylase domain-containing protein sig. 30 70
  Pseudomonas stutzeri RCH2 Psest_2070 FOG: LysM repeat sig. 33 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02210 lytic transglycosylase cofit 29 70
  Ralstonia solanacearum PSI07 RPSI07_RS15235 lytic transglycosylase strong 29 70
  Ralstonia solanacearum UW163 UW163_RS15520 lytic transglycosylase insig. 29 70
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0057 FOG: LysM repeat strong 28 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4043 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 27 77
  Klebsiella michiganensis M5al BWI76_RS05435 murein transglycosylase D sig. 28 73
  Acinetobacter radioresistens SK82 MPMX26_02274 hypothetical protein strong 35 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS14160 transglycosylase SLT domain-containing protein sig. 30 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) strong 28 89
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS18295 lytic transglycosylase domain-containing protein insig. 36 42
  Pantoea sp. MT58 IAI47_15345 murein transglycosylase D sig. 30 71
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4256 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 29 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) no data 29 88
  Dickeya dianthicola 67-19 HGI48_RS16185 murein transglycosylase D cofit 31 70
  Dickeya dianthicola ME23 DZA65_RS17270 murein transglycosylase D sig. 31 70
  Erwinia tracheiphila SCR3 LU632_RS01075 mltD murein transglycosylase D insig. 30 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04400 membrane-bound lytic murein transglycosylase D strong 31 61
  Rahnella sp. WP5 EX31_RS21205 murein transglycosylase D cofit 31 70
  Serratia liquefaciens MT49 IAI46_04130 murein transglycosylase D cofit 31 70
  Burkholderia phytofirmans PsJN BPHYT_RS14205 lytic transglycosylase sig. 31 58
  Marinobacter adhaerens HP15 HP15_1806 membrane-bound lytic murein transglycosylase D precursor strong 31 60
  Dickeya dadantii 3937 DDA3937_RS16065 murein transglycosylase D cofit 30 70
  Pectobacterium carotovorum WPP14 HER17_RS05450 murein transglycosylase D cofit 28 77
  Paraburkholderia graminis OAS925 ABIE53_003006 membrane-bound lytic murein transglycosylase D strong 31 58
  Pseudomonas syringae pv. syringae B728a Psyr_1189 SLT:MLTD_N insig. 31 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1189 SLT:MLTD_N insig. 31 66
  Variovorax sp. OAS795 ABID97_RS14725 transglycosylase SLT domain-containing protein strong 29 72
  Cupriavidus basilensis FW507-4G11 RR42_RS13565 lytic transglycosylase strong 29 70
  Variovorax sp. SCN45 GFF1116 Membrane-bound lytic murein transglycosylase D insig. 29 72
  Herbaspirillum seropedicae SmR1 HSERO_RS17125 lytic murein transglycosylase sig. 27 71
  Pseudomonas fluorescens SBW25 PFLU_RS12905 transglycosylase SLT domain-containing protein cofit 31 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12905 transglycosylase SLT domain-containing protein sig. 31 80
  Pseudomonas putida KT2440 PP_4145 Membrane-bound lytic murein transglycosylase D insig. 33 57
  Pseudomonas fluorescens FW300-N2C3 AO356_24475 lytic transglycosylase strong 33 57
  Pseudomonas simiae WCS417 PS417_12215 lytic transglycosylase sig. 34 58
  Pseudomonas syringae pv. syringae B728a Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N insig. 33 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N insig. 33 57
  Acidovorax sp. GW101-3H11 Ac3H11_477 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) sig. 31 64
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) strong 33 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS04765 transglycosylase SLT domain-containing protein strong 31 58
  Vibrio cholerae E7946 ATCC 55056 CSW01_11400 lytic transglycosylase insig. 31 59
  Pseudomonas sp. S08-1 OH686_03585 Membrane-bound lytic murein transglycosylase D cofit 33 55
  Pseudomonas sp. RS175 PFR28_01551 Membrane-bound lytic murein transglycosylase D insig. 33 57
  Castellaniella sp019104865 MT123 ABCV34_RS10490 transglycosylase SLT domain-containing protein insig. 33 49
  Pseudomonas fluorescens FW300-N2E3 AO353_23485 lytic transglycosylase strong 32 57
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20380 lytic transglycosylase cofit 28 78
  Kangiella aquimarina DSM 16071 B158DRAFT_1060 FOG: LysM repeat strong 27 67
  Dechlorosoma suillum PS Dsui_2797 LysM repeat-containing protein strong 33 45
  Shewanella sp. ANA-3 Shewana3_3584 MltD domain-containing protein (RefSeq) cofit 28 71
  Lysobacter sp. OAE881 ABIE51_RS14110 lytic transglycosylase domain-containing protein insig. 30 55
  Shewanella oneidensis MR-1 SO4017 transglycosylase, Slt family (NCBI ptt file) insig. 28 71
  Alteromonas macleodii MIT1002 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor cofit 28 60
  Shewanella amazonensis SB2B Sama_1186 Slt family transglycosylase (RefSeq) insig. 29 70
  Shewanella loihica PV-4 Shew_2115 lytic transglycosylase, catalytic (RefSeq) strong 31 57
  Shewanella sp. ANA-3 Shewana3_2370 MltD domain-containing protein (RefSeq) no data 29 59
  Shewanella amazonensis SB2B Sama_1885 Slt family transglycosylase (RefSeq) strong 29 71
  Shewanella oneidensis MR-1 SO2564 transglycosylase, Slt family (NCBI ptt file) strong 25 83
  Rhodanobacter denitrificans MT42 LRK55_RS16485 transglycosylase SLT domain-containing protein strong 26 58
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16760 transglycosylase SLT domain-containing protein strong 26 58
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07290 LysM peptidoglycan-binding domain-containing protein insig. 25 58
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4037.1 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) insig. 25 55
  Rhodanobacter sp. FW510-T8 OKGIIK_08005 Lytic transglycosylase insig. 23 62