| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas simiae WCS417 | PS417_04770 | | LysR family transcriptional regulator | insig. | 100 | 100 |
| o | Pseudomonas orientalis W4I3 | QF045_RS07770 | | LysR family transcriptional regulator | cofit | 91 | 100 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_06230 | | LysR family transcriptional regulator | insig. | 64 | 100 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS18895 | | LysR family transcriptional regulator | insig. | 63 | 100 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS53035 | | LysR family transcriptional regulator | insig. | 63 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS24630 | | LysR family transcriptional regulator | insig. | 55 | 100 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS13705 | | LysR family transcriptional regulator | insig. | 52 | 99 |
| o | Serratia liquefaciens MT49 | IAI46_19860 | | LysR family transcriptional regulator | insig. | 53 | 100 |
| o | Rahnella sp. WP5 | EX31_RS02320 | | LysR family transcriptional regulator | insig. | 51 | 100 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4776 | | LysR-family transcriptional regulator STM2912 | insig. | 51 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS22630 | | LysR family transcriptional regulator | insig. | 50 | 100 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2834 | | Transcriptional regulator | insig. | 49 | 100 |
| o | Enterobacter sp. TBS_079 | MPMX20_03624 | | HTH-type transcriptional regulator DmlR | sig. | 48 | 100 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_03205 | | LysR family transcriptional regulator | no data | 52 | 100 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21145 | | LysR family transcriptional regulator | insig. | 44 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS14135 | | LysR family transcriptional regulator | insig. | 40 | 99 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS18220 | | LysR family transcriptional regulator | insig. | 43 | 99 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS25255 | | LysR family transcriptional regulator | no data | 40 | 99 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_18255 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Rhodospirillum rubrum S1H | Rru_A1041 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 37 | 100 |
| | Pseudomonas sp. BP01 | JOY50_RS27505 | | LysR family transcriptional regulator | insig. | 38 | 100 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS21445 | | LysR family transcriptional regulator | insig. | 37 | 96 |
| | Pseudomonas sp. RS175 | PFR28_01198 | | HTH-type transcriptional regulator DmlR | insig. | 38 | 96 |
| o | Azospirillum sp. SherDot2 | MPMX19_04985 | | HTH-type transcriptional regulator DmlR | insig. | 40 | 98 |
| | Shewanella amazonensis SB2B | Sama_3549 | | LyrR family transcriptional regulator (RefSeq) | insig. | 37 | 99 |
| | Marinobacter adhaerens HP15 | HP15_936 | | transcriptional regulator, LysR family protein | insig. | 35 | 99 |
| | Sinorhizobium meliloti 1021 | SMc00831 | | transcriptional regulator | insig. | 35 | 99 |
| | Acinetobacter baumannii LAC-4 | RR41_RS00210 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Sinorhizobium meliloti 1021 | SMc02984 | | transcriptional regulator | insig. | 36 | 99 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21915 | | LysR family transcriptional regulator | strong | 36 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06260 | | LysR family transcriptional regulator | insig. | 35 | 99 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_3985 | | Transcriptional regulator | insig. | 38 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS27965 | | LysR family transcriptional regulator | insig. | 38 | 98 |
| | Serratia liquefaciens MT49 | IAI46_16195 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| | Enterobacter sp. TBS_079 | MPMX20_00005 | | HTH-type transcriptional regulator PgrR | insig. | 37 | 99 |
| | Rhizobium sp. OAE497 | ABIE40_RS16690 | | LysR family transcriptional regulator | insig. | 34 | 100 |
| | Pseudomonas segetis P6 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | insig. | 34 | 100 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12490 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12295 | | LysR family transcriptional regulator | sig. | 34 | 99 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12790 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Dechlorosoma suillum PS | Dsui_0016 | | transcriptional regulator | strong | 36 | 100 |
| | Paraburkholderia graminis OAS925 | ABIE53_002538 | | DNA-binding transcriptional LysR family regulator | sig. | 35 | 99 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4039 | | LysR family transcriptional regulator YafC | insig. | 35 | 96 |
| | Enterobacter sp. TBS_079 | MPMX20_00892 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 98 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_07805 | | LysR family transcriptional regulator | insig. | 32 | 99 |
| | Pseudomonas simiae WCS417 | PS417_13080 | | LysR family transcriptional regulator | no data | 36 | 100 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2687 | | Transcriptional regulator | insig. | 33 | 98 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14735 | | LysR family transcripitonal regulator | insig. | 37 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03249 | | HTH-type transcriptional regulator DmlR | cofit | 37 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS09170 | | LysR substrate-binding domain-containing protein | insig. | 36 | 98 |
| | Pseudomonas segetis P6 | ACVTMO_RS22150 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_02650 | | LysR family transcriptional regulator | insig. | 35 | 99 |
| | Agrobacterium fabrum C58 | Atu3197 | | LysR family transcriptional regulator | insig. | 34 | 99 |
| | Dinoroseobacter shibae DFL-12 | Dshi_0123 | | transcriptional regulator, LysR family (RefSeq) | sig. | 33 | 99 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00578 | | transcriptional regulator, LysR family | insig. | 34 | 99 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15810 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Rhizobium sp. OAE497 | ABIE40_RS06595 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07990 | | LysR family transcriptional regulator | insig. | 36 | 97 |
| | Dickeya dianthicola ME23 | DZA65_RS14590 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3445 | | Transcriptional regulator, LysR family | insig. | 32 | 99 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4683 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | insig. | 38 | 98 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42300 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 35 | 100 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17675 | ptxR;inference=COORDINATES | HTH-type transcriptional regulator PtxR | insig. | 36 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_11080 | | HTH-type transcriptional regulator PtxR | sig. | 36 | 99 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39900 | ptxR;inference=COORDINATES | HTH-type transcriptional regulator PtxR | insig. | 36 | 99 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14825 | gfnR;inference=COORDINATES | glutathione-dependent formaldehyde neutralization regulator | insig. | 35 | 100 |
| | Escherichia coli BL21 | ECD_00201 | | LysR family putative transcriptional regulator | insig. | 34 | 96 |
| | Escherichia coli BW25113 | b0208 | yafC | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 34 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS02785 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Variovorax sp. SCN45 | GFF4197 | | Transcriptional regulator, LysR family | insig. | 36 | 99 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13720 | | LysR family transcriptional regulator | insig. | 35 | 100 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13720 | | LysR family transcriptional regulator | insig. | 35 | 100 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF461 | | Transcriptional regulator, LysR family | insig. | 35 | 98 |
| | Escherichia coli ECRC100 | OKFHMN_10000 | yafC | DNA-binding transcriptional regulator YafC | cofit | 34 | 96 |
| | Escherichia coli ECRC101 | MCAODC_00515 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Escherichia coli ECRC102 | NIAGMN_07850 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Escherichia coli ECRC98 | JDDGAC_13595 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Escherichia coli ECRC99 | KEDOAH_18155 | yafC | DNA-binding transcriptional regulator YafC | no data | 34 | 96 |
| | Pseudomonas sp. DMC3 | GFF2076 | | HTH-type transcriptional regulator DmlR | insig. | 36 | 99 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18535 | | glutathione-dependent formaldehyde neutralization regulator | insig. | 35 | 100 |
| | Pseudomonas orientalis W4I3 | QF045_RS16895 | | LysR substrate-binding domain-containing protein | cofit | 35 | 100 |
| | Escherichia coli ECOR38 | HEPCGN_07940 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c29160 | | HTH-type transcriptional regulator, LysR family | insig. | 32 | 99 |
| | Pseudomonas simiae WCS417 | PS417_06325 | | LysR family transcriptional regulator | strong | 36 | 98 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03453 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 96 |
| | Azospirillum brasilense Sp245 | AZOBR_RS16520 | | LysR family transcriptional regulator | insig. | 36 | 98 |
| | Escherichia coli ECOR27 | NOLOHH_02345 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Escherichia coli ECRC62 | BNILDI_09325 | yafC | DNA-binding transcriptional regulator YafC | insig. | 34 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_05002 | | HTH-type transcriptional regulator DmlR | insig. | 34 | 98 |
| | Shewanella oneidensis MR-1 | SO2053 | | transcriptional regulator, LysR family (NCBI ptt file) | insig. | 33 | 99 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1207 | | Transcriptional regulator, LysR family | insig. | 33 | 99 |
| | Klebsiella michiganensis M5al | BWI76_RS05415 | | LysR family transcriptional regulator | sig. | 33 | 96 |
| | Rhizobium sp. OAE497 | ABIE40_RS03550 | | LysR family transcriptional regulator | strong | 33 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05905 | | LysR family transcriptional regulator | insig. | 33 | 99 |
| | Pseudomonas sp. RS175 | PFR28_00026 | | HTH-type transcriptional regulator DmlR | insig. | 32 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 37 | 98 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1366 | | transcriptional regulator, LysR family | insig. | 37 | 98 |
| | Serratia liquefaciens MT49 | IAI46_21735 | | LysR family transcriptional regulator | insig. | 37 | 98 |
| | Shewanella sp. ANA-3 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | insig. | 35 | 96 |