Homologs of GFF6984 from Variovorax sp. SCN45

RNA polymerase sigma factor for flagellar operon
SEED: RNA polymerase sigma factor for flagellar operon

Top 100 hits from BLASTp (E < 0.01)

Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
	Variovorax sp. SCN45	GFF6984		RNA polymerase sigma factor for flagellar operon	insig.	100	100
o	Sphingomonas koreensis DSMZ 15582	Ga0059261_1726		RNA polymerase sigma factor, sigma-70 family	insig.	36	91
	Desulfovibrio vulgaris Hildenborough JW710	DVU3229	fliA	RNA polymerase sigma factor for flagellar operon FliA (TIGR)	strong	31	89
	Desulfovibrio vulgaris Miyazaki F	DvMF_2011		RNA polymerase, sigma 28 subunit, FliA/WhiG (RefSeq)	strong	29	89
	Dickeya dianthicola 67-19	HGI48_RS13350		RNA polymerase sigma factor FliA	cofit	29	91
	Dickeya dianthicola ME23	DZA65_RS13835		RNA polymerase sigma factor FliA	strong	29	91
	Dechlorosoma suillum PS	Dsui_1726		RNA polymerase sigma factor, FliA/WhiG family	cofit	30	90
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1428		RNA polymerase sigma factor for flagellar operon	insig.	30	89
	Dickeya dadantii 3937	DDA3937_RS13300		RNA polymerase sigma factor FliA	strong	29	91
	Pseudomonas fluorescens FW300-N2C3	AO356_03730		flagellar biosynthesis sigma factor	strong	26	90
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_2573		RNA polymerase sigma factor for flagellar operon	strong	26	90
	Pseudomonas segetis P6	ACVTMO_RS15490	fliA	RNA polymerase sigma factor FliA	strong	26	91
	Pseudomonas sp. BP01	JOY50_RS00585	fliA	RNA polymerase sigma factor FliA	cofit	27	91
	Pseudomonas putida KT2440	PP_4341		RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons	strong	27	91
	Pseudomonas sp. RS175	PFR28_00852		RNA polymerase sigma factor FliA	strong	26	90
	Pseudomonas sp. SVBP6	COO64_RS25625	fliA	RNA polymerase sigma factor FliA	cofit	26	90
	Rhodanobacter sp. FW510-T8	OKGIIK_02830	fliA	RNA polymerase sigma factor FliA	cofit	31	88
	Pseudomonas stutzeri RCH2	Psest_1740		RNA polymerase sigma factor, FliA/WhiG family	strong	27	90
	Pseudomonas sp. S08-1	OH686_02730		RNA polymerase sigma factor for flagellar operon	cofit	26	90
	Rahnella sp. WP5	EX31_RS09450		RNA polymerase sigma factor FliA	cofit	29	91
	Escherichia fergusonii Becca	EFB2_02023		RNA polymerase sigma factor FliA	insig.	28	90
	Pseudomonas syringae pv. syringae B728a	Psyr_3437		RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG	strong	27	90
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_3437		RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG	cofit	27	90
	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF1690		RNA polymerase sigma factor for flagellar operon	strong	29	90
	Acidovorax sp. GW101-3H11	Ac3H11_1381		RNA polymerase sigma factor for flagellar operon	sig.	28	89
	Escherichia coli Nissle 1917	ECOLIN_RS10975		RNA polymerase sigma factor FliA	insig.	28	90
	Escherichia coli BW25113	b1922	fliA	flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS)	sig.	28	90
	Escherichia coli ECOR27	NOLOHH_16400	fliA	RNA polymerase sigma factor FliA	cofit	28	90
	Escherichia coli ECOR38	HEPCGN_04135	fliA	RNA polymerase sigma factor FliA	insig.	28	90
	Escherichia coli ECRC100	OKFHMN_25780	fliA	RNA polymerase sigma factor FliA	cofit	28	90
	Escherichia coli ECRC101	MCAODC_19610	fliA	RNA polymerase sigma factor FliA	insig.	28	90
	Escherichia coli ECRC102	NIAGMN_02270	fliA	RNA polymerase sigma factor FliA	insig.	28	90
	Escherichia coli ECRC62	BNILDI_15190	fliA	RNA polymerase sigma factor FliA	cofit	28	90
	Escherichia coli ECRC98	JDDGAC_00370	fliA	RNA polymerase sigma factor FliA	insig.	28	90
	Escherichia coli ECRC99	KEDOAH_02310	fliA	RNA polymerase sigma factor FliA	no data	28	90
	Pseudomonas fluorescens GW456-L13	PfGW456L13_4331		RNA polymerase sigma factor for flagellar operon	insig.	26	90
	Pseudomonas fluorescens SBW25	PFLU_RS21660		RNA polymerase sigma factor FliA	cofit	26	90
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS21660		RNA polymerase sigma factor FliA	strong	26	90
	Pseudomonas simiae WCS417	PS417_19695		flagellar biosynthesis sigma factor	strong	26	90
	Rhodanobacter sp000427505 FW510-R12	LRK53_RS14995		RNA polymerase sigma factor FliA	insig.	29	88
	Pseudomonas lactucae CFBP13502	GEMAOFIL_04138		RNA polymerase sigma factor FliA	cofit	26	90
	Rhodanobacter denitrificans MT42	LRK55_RS13320		RNA polymerase sigma factor FliA	cofit	29	88
	Rhodanobacter denitrificans FW104-10B01	LRK54_RS13580		RNA polymerase sigma factor FliA	strong	29	88
	Enterobacter asburiae PDN3	EX28DRAFT_0625		RNA polymerase sigma factor, FliA/WhiG family	cofit	28	90
	Enterobacter sp. TBS_079	MPMX20_02847		RNA polymerase sigma factor FliA	strong	28	90
	Pseudomonas sp. DMC3	GFF2472		RNA polymerase sigma factor FliA	cofit	25	90
	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_01807		RNA polymerase sigma factor FliA	insig.	27	90
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3626		RNA polymerase sigma factor for flagellar operon	insig.	25	90
	Pseudomonas fluorescens FW300-N2E3	AO353_18785		flagellar biosynthesis sigma factor	strong	25	90
	Pseudomonas orientalis W4I3	QF045_RS21835		RNA polymerase sigma factor FliA	insig.	26	90
	Erwinia tracheiphila SCR3	LU632_RS13785		RNA polymerase sigma factor FliA	insig.	28	88
	Pseudomonas aeruginosa MRSN321	DY961_RS05635	fliA;inference=COORDINATES	RNA polymerase sigma factor FliA	strong	27	88
	Pseudomonas aeruginosa PA14	IKLFDK_06920		flagellar biosynthesis sigma factor FliA	strong	27	88
	Pseudomonas aeruginosa PUPa3	DQ20_RS47155	fliA;inference=COORDINATES	RNA polymerase sigma factor FliA	strong	27	88
	Erwinia tracheiphila HP pepo 2.2	IJEDHG_21960	fliA	RNA polymerase sigma factor FliA	cofit	28	88
	Herbaspirillum seropedicae SmR1	HSERO_RS10160		flagellar biosynthesis sigma factor	strong	26	89
	Shewanella amazonensis SB2B	Sama_2280	fliA	flagellar biosynthesis sigma factor (RefSeq)	strong	28	88
	Paraburkholderia sabiae LMG 24235	QEN71_RS28940		RNA polymerase sigma factor FliA	strong	27	91
	Methylophilus sp. DMC18	GFF1338		RNA polymerase sigma factor FliA	cofit	29	88
	Pantoea sp. MT58	IAI47_08160		RNA polymerase sigma factor FliA	cofit	28	88
	Pantoea agglomerans CFBP13505 P0401	PagCFBP13505_RS02055		RNA polymerase sigma factor FliA	cofit	28	88
	Paraburkholderia graminis OAS925	ABIE53_000108		RNA polymerase sigma factor for flagellar operon FliA	strong	27	88
	Vibrio cholerae E7946 ATCC 55056	CSW01_10335		RNA polymerase sigma factor FliA	cofit	27	93
	Castellaniella sp019104865 MT123	ABCV34_RS05605		RNA polymerase sigma factor FliA	sig.	30	96
	Pseudomonas segetis P6	ACVTMO_RS16960	rpoS	RNA polymerase sigma factor RpoS	strong	27	89
	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_05756		RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG	strong	27	88
	Marinobacter adhaerens HP15	HP15_1283		RNA polymerase, sigma 70 subunit, RpoD family	strong	30	89
	Lysobacter sp. OAE881	ABIE51_RS16865		RNA polymerase sigma factor FliA	strong	28	90
	Erwinia amylovora T8	OLJFJH_12555		RNA polymerase sigma factor FliA	sig.	28	88
	Serratia liquefaciens MT49	IAI46_15785		RNA polymerase sigma factor FliA	cofit	28	91
	Marinobacter adhaerens HP15	HP15_2302		flagellar biosynthesis sigma factor FliA	strong	26	88
	Cupriavidus basilensis FW507-4G11	RR42_RS13185		RNA polymerase sigma factor RpoS	strong	27	88
	Burkholderia phytofirmans PsJN	BPHYT_RS18925		RNA polymerase sigma70	strong	27	88
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.2832.1		RNA polymerase sigma factor for flagellar operon	cofit	29	88
	Vibrio cholerae E7946 ATCC 55056	CSW01_02835		RNA polymerase sigma factor RpoS	cofit	29	92
	Pectobacterium carotovorum WPP14	HER17_RS08355		RNA polymerase sigma factor FliA	cofit	27	91
	Pseudomonas stutzeri RCH2	Psest_2806		RNA polymerase sigma factor RpoS	strong	29	89
	Dinoroseobacter shibae DFL-12	Dshi_2978		RNA polymerase, sigma 32 subunit, RpoH (RefSeq)	strong	26	89
	Pseudomonas sp. S08-1	OH686_18185		RNA polymerase sigma factor RpoS	cofit	27	89
	Shewanella loihica PV-4	Shew_1383	fliA	flagellar biosynthesis sigma factor (RefSeq)	strong	28	88
	Pseudomonas aeruginosa MRSN321	DY961_RS14865	rpoS;go_function=DNA	RNA polymerase sigma factor RpoS	strong	28	89
	Pseudomonas aeruginosa PA14	IKLFDK_18495		RNA polymerase sigma factor RpoS	strong	28	89
	Pseudomonas aeruginosa PUPa3	DQ20_RS42260	rpoS;go_function=DNA	RNA polymerase sigma factor RpoS	strong	28	89
	Dyella japonica UNC79MFTsu3.2	ABZR86_RS20265		RNA polymerase sigma factor FliA	insig.	28	88
	Synechococcus elongatus PCC 7942	Synpcc7942_0672	rpoD3	RNA polymerase sigma factor SigD	sig.	27	89
	Pseudomonas fluorescens SBW25	PFLU_RS06430		RNA polymerase sigma factor RpoS	cofit	27	89
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS06430		RNA polymerase sigma factor RpoS	strong	27	89
	Mycobacterium tuberculosis H37Rv	Rv3286c		Alternative RNA polymerase sigma factor SigF	insig.	30	88
	Pseudomonas sp. RS175	PFR28_00427		RNA polymerase sigma factor RpoS	strong	28	89
	Pseudomonas syringae pv. syringae B728a	Psyr_1374		RNA polymerase, sigma 38 subunit, RpoS	sig.	27	89
	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_1374		RNA polymerase, sigma 38 subunit, RpoS	cofit	27	89
	Pseudomonas lactucae CFBP13502	GEMAOFIL_01443		RNA polymerase sigma factor RpoS	cofit	28	89
	Pseudomonas fluorescens FW300-N2E3	AO353_16615		RNA polymerase sigma factor RpoS	strong	28	89
	Synechocystis sp000284455 PCC 6803	SGL_RS12540		RNA polymerase sigma factor, RpoD/SigA family	strong	27	89
	Shewanella sp. ANA-3	Shewana3_1359	fliA	flagellar biosynthesis sigma factor (RefSeq)	strong	27	88
	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_3115		RNA polymerase sigma factor RpoS	strong	28	89
	Pseudomonas sp. DMC3	GFF2084		RNA polymerase sigma factor RpoS	strong	28	89
	Pseudomonas orientalis W4I3	QF045_RS09210		RNA polymerase sigma factor RpoS	insig.	28	89
	Pseudomonas simiae WCS417	PS417_06365		RNA polymerase sigma factor	strong	28	89
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_3037		RNA polymerase sigma factor RpoS	strong	28	89