Homologs of GFF5341 from Variovorax sp. SCN45

Efflux ABC transporter, permease protein
SEED: ABC-type multidrug transport system, permease component
KEGG: antibiotic transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF5341 Efflux ABC transporter, permease protein insig. 100 100
o Variovorax sp. OAS795 ABID97_RS23180 ABC transporter permease insig. 94 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1318 ABC-type multidrug transport system, permease component cofit 81 98
o Cupriavidus basilensis FW507-4G11 RR42_RS18935 metal-dependent hydrolase insig. 75 98
o Acidovorax sp. GW101-3H11 Ac3H11_4719 ABC-type multidrug transport system, permease component sig. 82 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS02520 ABC transporter permease sig. 74 98
o Ralstonia solanacearum PSI07 RPSI07_RS10370 ABC transporter permease strong 74 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06865 ABC transporter permease insig. 74 98
o Ralstonia solanacearum UW163 UW163_RS06750 ABC transporter permease insig. 74 98
o Herbaspirillum seropedicae SmR1 HSERO_RS20365 metal-dependent hydrolase sig. 71 98
o Ralstonia solanacearum GMI1000 RS_RS14810 ABC transporter permease insig. 74 98
o Burkholderia phytofirmans PsJN BPHYT_RS17730 metal-dependent hydrolase sig. 68 98
o Paraburkholderia graminis OAS925 ABIE53_003705 ABC-2 type transport system permease protein sig. 67 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05648 ABC-2 type transport system permease protein sig. 68 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS27885 ABC transporter permease cofit 68 98
o Methylophilus sp. DMC18 GFF1557 Inner membrane transport permease YadH insig. 65 98
o Castellaniella sp019104865 MT123 ABCV34_RS11210 ABC transporter permease sig. 61 98
o Dechlorosoma suillum PS Dsui_1405 ABC-type polysaccharide/polyol phosphate export systems, permease component insig. 66 98
o Dinoroseobacter shibae DFL-12 Dshi_2615 ABC-2 type transporter (RefSeq) insig. 46 98
o Rhodospirillum rubrum S1H Rru_A0640 ABC-2 transporter component (NCBI) insig. 44 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11940 ABC transporter permease insig. 45 98
o Phaeobacter inhibens DSM 17395 PGA1_c24250 inner membrane transport permease sig. 45 98
o Caulobacter crescentus NA1000 CCNA_02327 ABC transporter permease protein strong 47 92
o Caulobacter crescentus NA1000 Δfur CCNA_02327 ABC transporter permease protein cofit 47 92
o Magnetospirillum magneticum AMB-1 AMB_RS01590 multidrug ABC transporter permease insig. 45 96
o Azospirillum brasilense Sp245 AZOBR_RS19020 multidrug ABC transporter permease insig. 44 96
o Shewanella sp. ANA-3 Shewana3_0795 ABC-2 type transporter (RefSeq) insig. 38 97
o Azospirillum sp. SherDot2 MPMX19_02176 Inner membrane transport permease YadH insig. 43 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS01310 ABC transporter permease insig. 38 100
o Shewanella oneidensis MR-1 SO3801 ABC transporter, permease protein (NCBI ptt file) sig. 38 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_3203 ABC-type multidrug transport system, permease component cofit 41 96
o Shewanella amazonensis SB2B Sama_0773 ABC-type polysaccharide/polyol phosphate export systems permease component (RefSeq) sig. 39 98
o Marinobacter adhaerens HP15 HP15_1462 ABC-type multidrug transport system, permease component insig. 37 98
  Castellaniella sp019104865 MT123 ABCV34_RS02915 ABC transporter permease insig. 36 99
o Lysobacter sp. OAE881 ABIE51_RS00695 ABC transporter permease strong 35 96
o Sphingobium sp. HT1-2 GFF3447 Efflux ABC transporter, permease protein cofit 41 98
o Serratia liquefaciens MT49 IAI46_21260 ABC transporter permease insig. 43 82
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5048.1 permease sig. 36 96
o Kangiella aquimarina DSM 16071 B158DRAFT_2038 ABC-type polysaccharide/polyol phosphate export systems, permease component sig. 34 100
o Shewanella loihica PV-4 Shew_3140 ABC-2 type transporter (RefSeq) insig. 38 89
  Azospirillum brasilense Sp245 AZOBR_RS23890 sugar ABC transporter permease strong 36 97
o Vibrio cholerae E7946 ATCC 55056 CSW01_03125 ABC transporter permease insig. 36 98
o Dickeya dadantii 3937 DDA3937_RS15970 ABC transporter permease insig. 43 82
o Erwinia amylovora T8 OLJFJH_00800 ABC transporter permease insig. 40 88
o Alteromonas macleodii MIT1002 MIT1002_03699 Inner membrane transport permease YadH insig. 39 95
o Bosea sp. OAE506 ABIE41_RS06200 ABC transporter permease insig. 35 98
o Dickeya dianthicola 67-19 HGI48_RS16085 ABC transporter permease insig. 40 86
o Dickeya dianthicola ME23 DZA65_RS17170 ABC transporter permease insig. 40 86
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS15760 ABC transporter permease insig. 35 100
o Escherichia coli ECOR38 HEPCGN_08410 Inner membrane transport permease YadH insig. 40 92
o Pectobacterium carotovorum WPP14 HER17_RS05545 ABC transporter permease cofit 44 82
o Escherichia coli BL21 ECD_00127 putative ABC transporter permease insig. 39 94
o Escherichia fergusonii Becca EFB2_03917 Inner membrane transport permease YadH insig. 39 94
o Escherichia coli ECOR27 NOLOHH_02775 yadH Inner membrane transport permease YadH insig. 39 94
o Escherichia coli ECRC100 OKFHMN_10430 yadH Inner membrane transport permease YadH cofit 39 94
o Escherichia coli ECRC101 MCAODC_00945 yadH Inner membrane transport permease YadH insig. 39 94
o Escherichia coli ECRC102 NIAGMN_08280 yadH Inner membrane transport permease YadH cofit 39 94
o Escherichia coli ECRC62 BNILDI_08895 yadH Inner membrane transport permease YadH insig. 39 94
o Escherichia coli ECRC98 JDDGAC_14025 yadH Inner membrane transport permease YadH insig. 39 94
o Escherichia coli ECRC99 KEDOAH_17725 yadH Inner membrane transport permease YadH no data 39 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03533 Inner membrane transport permease YadH insig. 39 94
o Escherichia coli Nissle 1917 ECOLIN_RS00710 ABC transporter permease insig. 39 94
o Escherichia coli BW25113 b0128 yadH predicted transporter subunit: membrane component of ABC superfamily (NCBI) sig. 39 94
o Klebsiella michiganensis M5al BWI76_RS04970 ABC transporter permease insig. 38 94
  Paraburkholderia graminis OAS925 ABIE53_005060 ABC-2 type transport system permease protein sig. 33 100
  Burkholderia phytofirmans PsJN BPHYT_RS29970 sugar ABC transporter permease insig. 33 100
o Rhodanobacter denitrificans MT42 LRK55_RS15515 ABC transporter permease cofit 34 100
o Agrobacterium fabrum C58 Atu1906 ABC transporter, membrane spanning protein sig. 34 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02997 ABC-2 type transport system permease protein insig. 33 97
o Pseudomonas putida KT2440 PP_1896 putative ABC transporter - permease subunit insig. 36 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS13325 ABC transporter permease cofit 40 82
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4637.1 ABC-type multidrug transport system, permease component insig. 34 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16405 ABC transporter permease cofit 34 96
o Sinorhizobium meliloti 1021 SMc04218 transport transmembrane protein insig. 33 100
  Azospirillum sp. SherDot2 MPMX19_04599 Inner membrane transport permease YadH insig. 36 97
o Enterobacter asburiae PDN3 EX28DRAFT_3725 ABC-type polysaccharide/polyol phosphate export systems, permease component strong 38 92
o Pantoea sp. MT58 IAI47_15675 ABC transporter permease insig. 40 82
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_15020 ABC transporter permease no data 40 84
o Erwinia tracheiphila SCR3 LU632_RS20120 ABC transporter permease insig. 40 84
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF100 ABC-type multidrug transport system, permease component insig. 39 86
o Pseudomonas sp. BP01 JOY50_RS16885 ABC transporter permease insig. 36 98
o Enterobacter sp. TBS_079 MPMX20_00822 Inner membrane transport permease YadH insig. 39 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF155 ABC-type multidrug transport system, permease component insig. 36 99
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12985 ABC transporter permease insig. 35 97
  Lysobacter sp. OAE881 ABIE51_RS18615 ABC transporter permease insig. 34 99
o Acinetobacter baumannii LAC-4 RR41_RS05845 ABC transporter permease insig. 36 96
o Pseudomonas sp. SVBP6 COO64_RS05900 ABC transporter permease insig. 36 92
o Klebsiella pneumoniae MRSN742743 KFA93_RS11670 ABC transporter permease insig. 39 84
o Pseudomonas segetis P6 ACVTMO_RS18065 ABC transporter permease insig. 35 97
o Pseudomonas sp. S08-1 OH686_16800 Efflux ABC transporter, permease protein insig. 33 99
o Klebsiella pneumoniae MKP103 KDGMDA_13225 ABC transporter permease insig. 39 84
o Rhodopseudomonas palustris CGA009 TX73_018180 ABC transporter permease sig. 33 100
o Pseudomonas aeruginosa PA14 IKLFDK_14225 ABC transporter permease sig. 36 97
o Pseudomonas stutzeri RCH2 Psest_0321 Predicted membrane protein sig. 33 97
o Pseudomonas fluorescens FW300-N2E3 AO353_01480 hypothetical protein strong 35 97
  Marinobacter adhaerens HP15 HP15_1735 ABC transporter, permease protein strong 33 100
  Phaeobacter inhibens DSM 17395 PGA1_c02840 inner membrane transport permease insig. 35 98
o Pseudomonas aeruginosa MRSN321 DY961_RS02995 ABC transporter permease sig. 36 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS32600 ABC transporter permease sig. 36 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS20370 ABC transporter permease insig. 31 99