Homologs of PS417_24580 from Pseudomonas simiae WCS417

pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 94 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 94 100
o Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 89 100
o Pseudomonas syringae pv. syringae B728a Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 87 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 87 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 91 94
o Pseudomonas fluorescens FW300-N2C3 AO356_15455 pseudouridine synthase insig. 91 94
o Pseudomonas sp. DMC3 GFF3909 Ribosomal large subunit pseudouridine synthase E insig. 91 94
o Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 90 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 90 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 92 89
o Pseudomonas putida KT2440 PP_4778 23S rRNA pseudouridine 2457 synthase insig. 83 100
o Pseudomonas sp. SVBP6 COO64_RS15465 pseudouridine synthase insig. 92 88
o Pseudomonas sp. BP01 JOY50_RS21765 pseudouridine synthase insig. 82 100
o Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 79 100
o Pseudomonas aeruginosa PA14 IKLFDK_20470 Ribosomal large subunit pseudouridine synthase E insig. 83 91
o Pseudomonas sp. S08-1 OH686_08840 LSU rRNA pseudouridine(2457) synthase insig. 82 89
o Castellaniella sp019104865 MT123 ABCV34_RS13900 pseudouridine synthase insig. 74 89
  Shewanella sp. ANA-3 Shewana3_1749 ribosomal large subunit pseudouridine synthase E (RefSeq) insig. 62 96
o Azospirillum brasilense Sp245 AZOBR_RS03795 Pseudouridine synthase insig. 72 83
  Shewanella loihica PV-4 Shew_1562 pseudouridylate synthase (RefSeq) insig. 67 84
o Alteromonas macleodii MIT1002 MIT1002_01829 Ribosomal large subunit pseudouridine synthase E insig. 65 83
o Magnetospirillum magneticum AMB-1 AMB_RS12420 pseudouridine synthase cofit 69 83
o Shewanella amazonensis SB2B Sama_2060 pseudouridylate synthase (RefSeq) insig. 65 89
o Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 66 84
o Escherichia coli ECOR27 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 60 90
o Escherichia coli ECRC62 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 60 90
o Escherichia coli BW25113 b1135 ymfC orf, hypothetical protein (VIMSS) sig. 60 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 64 85
o Escherichia coli BL21 ECD_01133 23S rRNA pseudouridine(2457) synthase insig. 60 90
o Escherichia coli ECRC100 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 60 90
o Escherichia coli ECRC101 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 60 90
o Escherichia coli ECRC102 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 60 90
o Escherichia coli ECRC98 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 60 90
o Escherichia coli ECRC99 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 60 90
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E insig. 60 90
o Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 66 83
o Klebsiella michiganensis M5al BWI76_RS11325 23S rRNA pseudouridine synthase E no data 64 84
o Escherichia fergusonii Becca EFB2_02840 Ribosomal large subunit pseudouridine synthase E insig. 58 90
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 64 83
o Variovorax sp. SCN45 GFF6670 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) insig. 69 84
o Enterobacter sp. TBS_079 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E insig. 61 89
o Kangiella aquimarina DSM 16071 B158DRAFT_1837 ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-) insig. 62 83
  Phaeobacter inhibens DSM 17395 PGA1_c16410 ribosomal large subunit pseudouridine synthase E insig. 63 84
o Pantoea sp. MT58 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE insig. 56 98
o Acidovorax sp. GW101-3H11 Ac3H11_10 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 63 91
o Escherichia coli ECOR38 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 58 90
  Dechlorosoma suillum PS Dsui_3293 pseudouridine synthase family protein insig. 65 82
o Enterobacter asburiae PDN3 EX28DRAFT_1795 pseudouridine synthase insig. 59 89
o Rahnella sp. WP5 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE insig. 60 88
  Cupriavidus basilensis FW507-4G11 RR42_RS17140 pseudouridine synthase insig. 67 82
o Pectobacterium carotovorum WPP14 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE insig. 61 83
o Dickeya dianthicola ME23 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE insig. 61 83
o Erwinia tracheiphila SCR3 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 57 91
o Serratia liquefaciens MT49 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE insig. 57 89
o Dickeya dianthicola 67-19 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE insig. 60 83
o Dickeya dadantii 3937 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE insig. 60 83
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS02720 pseudouridine synthase insig. 63 82
o Dinoroseobacter shibae DFL-12 Dshi_2908 pseudouridine synthase (RefSeq) insig. 62 82
o Lysobacter sp. OAE881 ABIE51_RS00615 pseudouridine synthase insig. 63 82
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS09950 pseudouridine synthase insig. 66 81
o Methylophilus sp. DMC18 GFF278 Ribosomal large subunit pseudouridine synthase E insig. 60 84
o Rhodanobacter denitrificans MT42 LRK55_RS09590 pseudouridine synthase insig. 66 81
o Erwinia amylovora T8 OLJFJH_15245 23S rRNA pseudouridine(2457) synthase RluE insig. 57 91
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.351.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 62 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 60 83
o Rhodospirillum rubrum S1H Rru_A1939 Pseudouridine synthase, Rsu (NCBI) insig. 60 85
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS13170 pseudouridine synthase insig. 60 82
o Rhodanobacter sp. FW510-T8 OKGIIK_16200 Pseudouridine synthase insig. 63 82
o Synechococcus elongatus PCC 7942 Synpcc7942_1514 Pseudouridine synthase, Rsu sig. 56 84
  Marinobacter adhaerens HP15 HP15_2084 RNA pseudouridylate synthase insig. 65 72
o Paraburkholderia sabiae LMG 24235 QEN71_RS02975 pseudouridine synthase insig. 59 84
o Herbaspirillum seropedicae SmR1 HSERO_RS07010 pseudouridine synthase insig. 59 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase insig. 56 84
o Paraburkholderia graminis OAS925 ABIE53_003318 23S rRNA pseudouridine2457 synthase insig. 58 83
  Acinetobacter radioresistens SK82 MPMX26_01011 hypothetical protein insig. 58 83
  Burkholderia phytofirmans PsJN BPHYT_RS15735 pseudouridine synthase insig. 58 79
o Synechocystis sp000284455 PCC 6803 SGL_RS01880 pseudouridine synthase insig. 52 82
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1556 pseudouridine synthase insig. 49 83
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 38 89
  Shewanella loihica PV-4 Shew_0814 pseudouridine synthase (RefSeq) insig. 44 82
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 39 85
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 41 85
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase insig. 40 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 40 85
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS09485 rRNA pseudouridine synthase insig. 39 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 38 91
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08260 pseudouridine synthase insig. 41 82
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 40 86
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 43 83
o Cellulophaga baltica 18 M666_RS16840 pseudouridine synthase insig. 41 82
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 38 88
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase insig. 41 75
  Variovorax sp. SCN45 GFF7619 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no data 47 68
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 34 88
  Methylophilus sp. DMC18 GFF891 hypothetical protein insig. 36 76
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 35 87
  Burkholderia phytofirmans PsJN BPHYT_RS08050 pseudouridine synthase no data 35 88
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 40 83